You are here

Home

ASPNIDRAFT_54635-T1, ASPNIDRAFT_54635-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_54635-T1
Unique NameASPNIDRAFT_54635-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000016.1:326150..328183+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_54635-T1 ID=ASPNIDRAFT_54635-T1|Name=ASPNIDRAFT_54635-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=2034bp|location=Sequence derived from alignment at ACJE01000016.1:326150..328183+ (Aspergillus niger ATCC 1015)
TGTCGAACGACCATTCCAATCATCTTATCCTCCCCTGGACATCTCTGTGT
CGCTGACTGAGAACTGGTCGGATCACTCTGTGTCCTGATCGTTCATCGTC
CGCTTCTCACATTCGTTTGAAACCTACTCCTTCTTTGCTGGGGCCCTCCG
GTGCCGCACCACTCCCGCAGCCAGCCTTTTCCCTACCCTTTTTCCTGCCC
CGGGCGATCGCTGGCTCTCCCCCCCCTTCTCCATATCGCATCATCGACTC
TGACATCCCCTGTCGACGCCTTTGATCCGTCAGATTTCAGTCTCGATTTT
GTGTGATCGTCCCTGCGAATATCAGCATCGCGTCGAAACCCGCTCCTTTT
CCCTTCCCCGGACGGTCCGTCTCTTCCGCTGCCCGTTCTGCATCGTGTTG
TCCGCTCCACGACAGATTGATCGATCTCCTCGGACCCTGGTGTCCCAGCG
ACAGGCATCCCATCCCCAGAAATCGTCGCCTAGCTGTAGGCGTCGACGGT
TTCTGATTACGAAAAGCGAGAGTATTCTGCTCGCTTTCCTGGCCAACTCA
TAATCTTATTTCCCCTTTTTTTTCTCCCTCCCCGTCGCGAAGATGTTGCT
CCCCAAGGGTGGTGTAACGTGGAAGTCTGCCAAAGCAAGGCTGCCTCCAT
GGCGAGCTGTTCTGTTCCTTGTCACACGGACCCGTTTTCTGGTCTCATTG
GCCATTACTGGTCTTGTAGTCCTACTATGGCGTGGCATCAGCAAGTCAGC
GTCCGAGATGCAGAGGTGAGTACCTGACTCGACGTTGGCCGGGCTGCCCG
CAACACCCGGTCCCTGGCAATGACTTGCAGGCACGCGACCAGAAAACGCT
AACGGCTGCATGTAGCTTCTACTGCTATGGTCCTTCAAAATCGCCGATGG
AGATGAGCATCAATGAAATGGTCGAGTGGACCGCACACACGCAGACCCCT
GTCCTCTTCAACCACCACGCTGCCTATGAAGTGAACTCCTCGAGCATCAA
GACAGTCGACCTCAACCCCATCAAGTCTACCTCCCAGGCCATTTCGAATT
CTGAGCGGGTGCTCATCCTCACCCCTCTGAGAGATGCATCCGAGCATCTG
GTCAACTACTTCGATCTCCTCTACAAGCTGACGTATCCTCACAACCTCAT
TGACTTGGCTTTCCTCGTTGGTGATTGCAGTGACGACACCATGGCTGTTC
TTACCGCTGAGCTGTCCCGGATCCAGGACCAGGTGGATGAGAAGATTGCT
TTCCGTAGCGCGACAATCGTGCAGAAGGACTTTGGAGCTGATATCGAAAT
GAACGTCGAGGACAGGCACTCCTTTGCTGCTCAAGGCCCGCGCCGCAAGG
CCATCGGTCGCGCCCGCAACTACCTGCTCTACTCTGCTCTCAAGCCTGAC
CACTCTTGGGTCTACTGGAGAGATGTTGACATTTTCGACAGCCCTGACAG
CATCATTGAAGATTTCATCGCTCATGACAGGGATATTTTGGTTCCAAGTA
TGTTGCTAGGCCCTTCATGAAAACCACGAATAAAGGTGCTAACCCAGTTG
CAGACATTTGGTTCCATCGCTACCGGGATGGTGTTGATGTCGAGGGTCGA
TGTATGTAAACAAACATCCCTTCACAATACTCGCTTTGCTAACTCTCGCA
GTTGACTACAACTCCTGGATCGAATCGGACAAGGGACGCCGCCTCCGAGA
GACTCTCGACCCTGATACTGTTCTGGCTGAAGGCTACAAGGAATACGACA
CTGGCCGGACTTACCTGGTCGGCATGGGTGACTGGAGAAAGAACAAGGAC
GAGGAAGTTGAGCTTGACGGTATCGGTGGTGTCAACATCCTCGTGAAGGC
CGATGTTCACCGGACTGGCATCAACTTCCCGGCCTACGCTTTTGAGAACC
AGGCTGAAACCGAGGGATTCGCCCGCATGGCTAAGCGCGCTGGATACCAG
GTGTACGGTCTTCCGAACTATGTCGTCTGGCACATTGATACGGATGAGAA
GCCTGGCAACCTCGGAGGCCGCAAGGCATACTAG
back to top

Coding sequence (CDS) from alignment at ACJE01000016.1:326150..328183+

>ASPNIDRAFT_54635-T1 ID=ASPNIDRAFT_54635-T1|Name=ASPNIDRAFT_54635-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=4944bp|location=Sequence derived from alignment at ACJE01000016.1:326150..328183+ (Aspergillus niger ATCC 1015)
ATGTTGCTCCCCAAGGGTGGTGTAACGTGGAAGTCTGCCAAAGCAAGGCT
GCCTCCATGGCGAGCTGTTCTGTTCCTTGTCACACGGACCCGTTTTCTGG
TCTCATTGGCCATTACTGGTCTTGTAGTCCTACTATGGCGTGGCATCAGC
AAGTCAGCGTCCGAGATGCAGAGCTTCTACTGCTATGGTCCTTCAAAATC
GCCGATGGAGATGAGCATCAATGAAATGGTCGAGTGGACCGCACACACGC
AGACCCCTGTCCTCTTCAACCACCACGCTGCCTATGAAGTGAACTCCTCG
AGCATCAAGACAGTCGACCTCAACCCCATCAAGTCTACCTCCCAGGCCAT
TTCGAATTCTGAGCGGGTGCTCATCCTCACCCCTCTGAGAGATGCATCCG
AGCATCTGGTCAACTACTTCGATCTCCTCTACAAGCTGACGTATCCTCAC
AACCTCATTGACTTGGCTTTCCTCGTTGGTGATTGCAGTGACGACACCAT
GGCTGTTCTTACCGCTGAGCTGTCCCGGATCCAGGACCAGGTGGATGAGA
AGATTGCTTTCCGTAGCGCGACAATCGTGCAGAAGGACTTTGGAGCTGAT
ATCGAAATGAACGTCGAGGACAGGCACTCCTTTGCTGCTCAAGGCCCGCG
CCGCAAGGCCATCGGTCGCGCCCGCAACTACCTGCTCTACTCTGCTCTCA
AGCCTGACCACTCTTGGGTCTACTGGAGAGATGTTGACATTTTCGACAGC
CCTGACAGCATCATTGAAGATTTCATCGCTCATGACAGGGATATTTTGGT
TCCAAACATTTGGTTCCATCGCTACCGGGATGGTGTTGATGTCGAGGGTC
GATTTGACTACAACTCCTGGATCGAATCGGACAAGGGACGCCGCCTCCGA
GAGACTCTCGACCCTGATACTGTTCTGGCTGAAGGCTACAAGGAATACGA
CACTGGCCGGACTTACCTGGTCGGCATGGGTGACTGGAGAAAGAACAAGG
ACGAGGAAGTTGAGCTTGACGGTATCGGTGGTGTCAACATCCTCGTGAAG
GCCGATGTTCACCGGACTGGCATCAACTTCCCGGCCTACGCTTTTGAGAA
CCAGGCTGAAACCGAGGGATTCGCCCGCATGGCTAAGCGCGCTGGATACC
AGGTGTACGGTCTTCCGAACTATGTCGTCTGGCACATTGATACGGATGAG
AAGCCTGGCAACCTCGGAGGCCGCAAGGCATACTAGATGTTGCTCCCCAA
GGGTGGTGTAACGTGGAAGTCTGCCAAAGCAAGGCTGCCTCCATGGCGAG
CTGTTCTGTTCCTTGTCACACGGACCCGTTTTCTGGTCTCATTGGCCATT
ACTGGTCTTGTAGTCCTACTATGGCGTGGCATCAGCAAGTCAGCGTCCGA
GATGCAGAGCTTCTACTGCTATGGTCCTTCAAAATCGCCGATGGAGATGA
GCATCAATGAAATGGTCGAGTGGACCGCACACACGCAGACCCCTGTCCTC
TTCAACCACCACGCTGCCTATGAAGTGAACTCCTCGAGCATCAAGACAGT
CGACCTCAACCCCATCAAGTCTACCTCCCAGGCCATTTCGAATTCTGAGC
GGGTGCTCATCCTCACCCCTCTGAGAGATGCATCCGAGCATCTGGTCAAC
TACTTCGATCTCCTCTACAAGCTGACGTATCCTCACAACCTCATTGACTT
GGCTTTCCTCGTTGGTGATTGCAGTGACGACACCATGGCTGTTCTTACCG
CTGAGCTGTCCCGGATCCAGGACCAGGTGGATGAGAAGATTGCTTTCCGT
AGCGCGACAATCGTGCAGAAGGACTTTGGAGCTGATATCGAAATGAACGT
CGAGGACAGGCACTCCTTTGCTGCTCAAGGCCCGCGCCGCAAGGCCATCG
GTCGCGCCCGCAACTACCTGCTCTACTCTGCTCTCAAGCCTGACCACTCT
TGGGTCTACTGGAGAGATGTTGACATTTTCGACAGCCCTGACAGCATCAT
TGAAGATTTCATCGCTCATGACAGGGATATTTTGGTTCCAAACATTTGGT
TCCATCGCTACCGGGATGGTGTTGATGTCGAGGGTCGATTTGACTACAAC
TCCTGGATCGAATCGGACAAGGGACGCCGCCTCCGAGAGACTCTCGACCC
TGATACTGTTCTGGCTGAAGGCTACAAGGAATACGACACTGGCCGGACTT
ACCTGGTCGGCATGGGTGACTGGAGAAAGAACAAGGACGAGGAAGTTGAG
CTTGACGGTATCGGTGGTGTCAACATCCTCGTGAAGGCCGATGTTCACCG
GACTGGCATCAACTTCCCGGCCTACGCTTTTGAGAACCAGGCTGAAACCG
AGGGATTCGCCCGCATGGCTAAGCGCGCTGGATACCAGGTGTACGGTCTT
CCGAACTATGTCGTCTGGCACATTGATACGGATGAGAAGCCTGGCAACCT
CGGAGGCCGCAAGGCATACTAGATGTTGCTCCCCAAGGGTGGTGTAACGT
GGAAGTCTGCCAAAGCAAGGCTGCCTCCATGGCGAGCTGTTCTGTTCCTT
GTCACACGGACCCGTTTTCTGGTCTCATTGGCCATTACTGGTCTTGTAGT
CCTACTATGGCGTGGCATCAGCAAGTCAGCGTCCGAGATGCAGAGCTTCT
ACTGCTATGGTCCTTCAAAATCGCCGATGGAGATGAGCATCAATGAAATG
GTCGAGTGGACCGCACACACGCAGACCCCTGTCCTCTTCAACCACCACGC
TGCCTATGAAGTGAACTCCTCGAGCATCAAGACAGTCGACCTCAACCCCA
TCAAGTCTACCTCCCAGGCCATTTCGAATTCTGAGCGGGTGCTCATCCTC
ACCCCTCTGAGAGATGCATCCGAGCATCTGGTCAACTACTTCGATCTCCT
CTACAAGCTGACGTATCCTCACAACCTCATTGACTTGGCTTTCCTCGTTG
GTGATTGCAGTGACGACACCATGGCTGTTCTTACCGCTGAGCTGTCCCGG
ATCCAGGACCAGGTGGATGAGAAGATTGCTTTCCGTAGCGCGACAATCGT
GCAGAAGGACTTTGGAGCTGATATCGAAATGAACGTCGAGGACAGGCACT
CCTTTGCTGCTCAAGGCCCGCGCCGCAAGGCCATCGGTCGCGCCCGCAAC
TACCTGCTCTACTCTGCTCTCAAGCCTGACCACTCTTGGGTCTACTGGAG
AGATGTTGACATTTTCGACAGCCCTGACAGCATCATTGAAGATTTCATCG
CTCATGACAGGGATATTTTGGTTCCAAACATTTGGTTCCATCGCTACCGG
GATGGTGTTGATGTCGAGGGTCGATTTGACTACAACTCCTGGATCGAATC
GGACAAGGGACGCCGCCTCCGAGAGACTCTCGACCCTGATACTGTTCTGG
CTGAAGGCTACAAGGAATACGACACTGGCCGGACTTACCTGGTCGGCATG
GGTGACTGGAGAAAGAACAAGGACGAGGAAGTTGAGCTTGACGGTATCGG
TGGTGTCAACATCCTCGTGAAGGCCGATGTTCACCGGACTGGCATCAACT
TCCCGGCCTACGCTTTTGAGAACCAGGCTGAAACCGAGGGATTCGCCCGC
ATGGCTAAGCGCGCTGGATACCAGGTGTACGGTCTTCCGAACTATGTCGT
CTGGCACATTGATACGGATGAGAAGCCTGGCAACCTCGGAGGCCGCAAGG
CATACTAGATGTTGCTCCCCAAGGGTGGTGTAACGTGGAAGTCTGCCAAA
GCAAGGCTGCCTCCATGGCGAGCTGTTCTGTTCCTTGTCACACGGACCCG
TTTTCTGGTCTCATTGGCCATTACTGGTCTTGTAGTCCTACTATGGCGTG
GCATCAGCAAGTCAGCGTCCGAGATGCAGAGCTTCTACTGCTATGGTCCT
TCAAAATCGCCGATGGAGATGAGCATCAATGAAATGGTCGAGTGGACCGC
ACACACGCAGACCCCTGTCCTCTTCAACCACCACGCTGCCTATGAAGTGA
ACTCCTCGAGCATCAAGACAGTCGACCTCAACCCCATCAAGTCTACCTCC
CAGGCCATTTCGAATTCTGAGCGGGTGCTCATCCTCACCCCTCTGAGAGA
TGCATCCGAGCATCTGGTCAACTACTTCGATCTCCTCTACAAGCTGACGT
ATCCTCACAACCTCATTGACTTGGCTTTCCTCGTTGGTGATTGCAGTGAC
GACACCATGGCTGTTCTTACCGCTGAGCTGTCCCGGATCCAGGACCAGGT
GGATGAGAAGATTGCTTTCCGTAGCGCGACAATCGTGCAGAAGGACTTTG
GAGCTGATATCGAAATGAACGTCGAGGACAGGCACTCCTTTGCTGCTCAA
GGCCCGCGCCGCAAGGCCATCGGTCGCGCCCGCAACTACCTGCTCTACTC
TGCTCTCAAGCCTGACCACTCTTGGGTCTACTGGAGAGATGTTGACATTT
TCGACAGCCCTGACAGCATCATTGAAGATTTCATCGCTCATGACAGGGAT
ATTTTGGTTCCAAACATTTGGTTCCATCGCTACCGGGATGGTGTTGATGT
CGAGGGTCGATTTGACTACAACTCCTGGATCGAATCGGACAAGGGACGCC
GCCTCCGAGAGACTCTCGACCCTGATACTGTTCTGGCTGAAGGCTACAAG
GAATACGACACTGGCCGGACTTACCTGGTCGGCATGGGTGACTGGAGAAA
GAACAAGGACGAGGAAGTTGAGCTTGACGGTATCGGTGGTGTCAACATCC
TCGTGAAGGCCGATGTTCACCGGACTGGCATCAACTTCCCGGCCTACGCT
TTTGAGAACCAGGCTGAAACCGAGGGATTCGCCCGCATGGCTAAGCGCGC
TGGATACCAGGTGTACGGTCTTCCGAACTATGTCGTCTGGCACATTGATA
CGGATGAGAAGCCTGGCAACCTCGGAGGCCGCAAGGCATACTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54635ASPNIDRAFT_54635Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54635-T1ASPNIDRAFT_54635-T1-proteinAspergillus niger ATCC 1015polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54635-T1.utr5p1ASPNIDRAFT_54635-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54635-T1.exon1ASPNIDRAFT_54635-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_54635-T1.exon2ASPNIDRAFT_54635-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_54635-T1.exon3ASPNIDRAFT_54635-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_54635-T1.exon4ASPNIDRAFT_54635-T1.exon4Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54635-T1.cdsASPNIDRAFT_54635-T1.cdsAspergillus niger ATCC 1015CDS


Properties
Property NameValue
NoteEggNog:ENOG41
NoteCAZy:GT62
DBxrefInterPro:IPR029044
DBxrefPFAM:PF03452
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000016.1supercontigACJE01000016.1:326150..328183 +
Powered by Drupal