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ASPNIDRAFT_54584-T1, ASPNIDRAFT_54584-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_54584-T1
Unique NameASPNIDRAFT_54584-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000016.1:641456..643148-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_54584-T1 ID=ASPNIDRAFT_54584-T1|Name=ASPNIDRAFT_54584-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1693bp|location=Sequence derived from alignment at ACJE01000016.1:641456..643148- (Aspergillus niger ATCC 1015)
CCTGCTGGTGTCGACTCCCGTGTTTACGTCCGGTGCTCCTCCTTTTAACC
TCCTGACGCCCACTCAGCTCATCCCCTCTTTTCTTGAGCTGCCGCATAGG
ACTTCTCTGAAGGTTCTTCCTCTCAAGGAGGAAGGGTCTAGGAGGCTTGG
TCCAGTCAACTTCGGTTGCGAATCTTTTCGCCCTCCCTAACACGCAGTCG
CGTTAAAGACACTCAACTTTTTTTTTACTACTTTACTTTTTTAAAAGACC
TATTCCGTGCTCCGTCGCAGCGCGCATGGTTATGGCACCGACTGCTTGTG
TACCTGCTGAAGTATGCACTCCTAAATACTACCAGGAGAAACACGACTAT
AATCTCAATTGGGATCATGGTCAATTCAGCAATCATGGAGGGGACGATTT
ATCGCAATCTAGGTTGGCTGCCAAGGAACTAGTCTTGGACATCCTGAAGA
AGCGCGCAGCTGAGGTCAATGTGGACAGCTGCGCGCCAGGAGAGGAGGAC
CCGTTTTACGTGGCAGATATGGGGGAGGTCTACCGCCAGCATCTGCGCTG
GAAAATGAACTTGAGCCGTGTTCGGCCTTTCTACGGTAAGGATATGAATG
CACAACTGGGATTTTCATGACAGCGGCTAACAGTGAGTCAATAGCGGTCA
AGTGCAACCCCGACCCGGAGATCCTTCGCCTCATGGCTAAACTCGGAAAC
GGTTTTGATTGTGCGTCCAAGGCCGAGATCGATATGGCCCTCGAGACCGG
CGTCGACCCAAGCCGCATCATCTACGCGCAGCCCTGCAAGACCAAGTCCT
ATCTGCGCTACGCCGCCCAGGTGGGCGTCAAGCAGATGACCTTTGACAAC
GCCGACGAGCTGTACAAGATCAAGGCCAACTACCCGGACGCCGAGCTTTA
TCTGCGCATCCTCACGGATGATTCGAACAGCTTGTGCCAGTTCAGCATGA
AATTCGGAGCTTCCTTGGACGTTGCTCGCCAGCTCCTCGAATTGGCGCAC
CAGCTCGAGCTGAAGGTGGTCGGCGTGAGTTTTCACGTCGGATCAGGCGC
TGAGGATCCTAAGGCTTTCCTGAAAGCCGTGCAGGACGCGCGCCTTGTGT
TTGATCAAGCCGCAGAGATTGGCCACGAACTGCACACTTTGGATGTCGGC
GGAGGTTTCTCCCAGGACACTTTTGAGAAATTCGCCGGCGTCCTGAGCGA
GGCGTTGGAGACCTATTTCCCGCCCAACATCCGGGTCATTGCCGAACCGG
GTCGCTACTATGTTGCCAATGCGTTCACTCTGGCGGCCAACATCATTGCT
CGCCGTGAGGTGCGCGACCCGGAGGACCCGGCCAACGACGCCTACATGCT
GTATCTCAACGACGGGGTGTATGGAAACTTCTCCAACATCATCTTTGACC
ACCAGCACCCCGTGGCCCAGGTCCTGACCTGTGCGTCGGCCGCTAACTCC
CCTTATGCTGCGACTTCGGGGGGTGTCACGTACTCCATCTGGGGGCCGAC
CTGTGACGGCATTGATGTTATCTCCAAGCGCATTGCGCTGCCAGCTCTGC
TGGAAGTTGGAGATTGGCTTTACTTCGAGGAGATGGGAGCCTACACCAAG
TGTAGCGCGACCCGCTTCAACGGCTTTTCGGACAACCACGAGGTGATCTA
CATCTCCAGCGAAGCCGGGGCTTCTGCGCTCCTCGAGTATTAG
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Coding sequence (CDS) from alignment at ACJE01000016.1:641456..643148-

>ASPNIDRAFT_54584-T1 ID=ASPNIDRAFT_54584-T1|Name=ASPNIDRAFT_54584-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2718bp|location=Sequence derived from alignment at ACJE01000016.1:641456..643148- (Aspergillus niger ATCC 1015)
CGGTCAAGTGCAACCCCGACCCGGAGATCCTTCGCCTCATGGCTAAACTC
GGAAACGGTTTTGATTGTGCGTCCAAGGCCGAGATCGATATGGCCCTCGA
GACCGGCGTCGACCCAAGCCGCATCATCTACGCGCAGCCCTGCAAGACCA
AGTCCTATCTGCGCTACGCCGCCCAGGTGGGCGTCAAGCAGATGACCTTT
GACAACGCCGACGAGCTGTACAAGATCAAGGCCAACTACCCGGACGCCGA
GCTTTATCTGCGCATCCTCACGGATGATTCGAACAGCTTGTGCCAGTTCA
GCATGAAATTCGGAGCTTCCTTGGACGTTGCTCGCCAGCTCCTCGAATTG
GCGCACCAGCTCGAGCTGAAGGTGGTCGGCGTGAGTTTTCACGTCGGATC
AGGCGCTGAGGATCCTAAGGCTTTCCTGAAAGCCGTGCAGGACGCGCGCC
TTGTGTTTGATCAAGCCGCAGAGATTGGCCACGAACTGCACACTTTGGAT
GTCGGCGGAGGTTTCTCCCAGGACACTTTTGAGAAATTCGCCGGCGTCCT
GAGCGAGGCGTTGGAGACCTATTTCCCGCCCAACATCCGGGTCATTGCCG
AACCGGGTCGCTACTATGTTGCCAATGCGTTCACTCTGGCGGCCAACATC
ATTGCTCGCCGTGAGGTGCGCGACCCGGAGGACCCGGCCAACGACGCCTA
CATGCTGTATCTCAACGACGGGGTGTATGGAAACTTCTCCAACATCATCT
TTGACCACCAGCACCCCGTGGCCCAGGTCCTGACCTGTGCGTCGGCCGCT
AACTCCCCTTATGCTGCGACTTCGGGGGGTGTCACGTACTCCATCTGGGG
GCCGACCTGTGACGGCATTGATGTTATCTCCAAGCGCATTGCGCTGCCAG
CTCTGCTGGAAGTTGGAGATTGGCTTTACTTCGAGGAGATGGGAGCCTAC
ACCAAGTGTAGCGCGACCCGCTTCAACGGCTTTTCGGACAACCACGAGGT
GATCTACATCTCCAGCGAAGCCGGGGCTTCTGCGCTCCTCGAGTATTAGA
TGGTTATGGCACCGACTGCTTGTGTACCTGCTGAAGTATGCACTCCTAAA
TACTACCAGGAGAAACACGACTATAATCTCAATTGGGATCATGGTCAATT
CAGCAATCATGGAGGGGACGATTTATCGCAATCTAGGTTGGCTGCCAAGG
AACTAGTCTTGGACATCCTGAAGAAGCGCGCAGCTGAGGTCAATGTGGAC
AGCTGCGCGCCAGGAGAGGAGGACCCGTTTTACGTGGCAGATATGGGGGA
GGTCTACCGCCAGCATCTGCGCTGGAAAATGAACTTGAGCCGTGTTCGGC
CTTTCTACGCGGTCAAGTGCAACCCCGACCCGGAGATCCTTCGCCTCATG
GCTAAACTCGGAAACGGTTTTGATTGTGCGTCCAAGGCCGAGATCGATAT
GGCCCTCGAGACCGGCGTCGACCCAAGCCGCATCATCTACGCGCAGCCCT
GCAAGACCAAGTCCTATCTGCGCTACGCCGCCCAGGTGGGCGTCAAGCAG
ATGACCTTTGACAACGCCGACGAGCTGTACAAGATCAAGGCCAACTACCC
GGACGCCGAGCTTTATCTGCGCATCCTCACGGATGATTCGAACAGCTTGT
GCCAGTTCAGCATGAAATTCGGAGCTTCCTTGGACGTTGCTCGCCAGCTC
CTCGAATTGGCGCACCAGCTCGAGCTGAAGGTGGTCGGCGTGAGTTTTCA
CGTCGGATCAGGCGCTGAGGATCCTAAGGCTTTCCTGAAAGCCGTGCAGG
ACGCGCGCCTTGTGTTTGATCAAGCCGCAGAGATTGGCCACGAACTGCAC
ACTTTGGATGTCGGCGGAGGTTTCTCCCAGGACACTTTTGAGAAATTCGC
CGGCGTCCTGAGCGAGGCGTTGGAGACCTATTTCCCGCCCAACATCCGGG
TCATTGCCGAACCGGGTCGCTACTATGTTGCCAATGCGTTCACTCTGGCG
GCCAACATCATTGCTCGCCGTGAGGTGCGCGACCCGGAGGACCCGGCCAA
CGACGCCTACATGCTGTATCTCAACGACGGGGTGTATGGAAACTTCTCCA
ACATCATCTTTGACCACCAGCACCCCGTGGCCCAGGTCCTGACCTGTGCG
TCGGCCGCTAACTCCCCTTATGCTGCGACTTCGGGGGGTGTCACGTACTC
CATCTGGGGGCCGACCTGTGACGGCATTGATGTTATCTCCAAGCGCATTG
CGCTGCCAGCTCTGCTGGAAGTTGGAGATTGGCTTTACTTCGAGGAGATG
GGAGCCTACACCAAGTGTAGCGCGACCCGCTTCAACGGCTTTTCGGACAA
CCACGAGGTGATCTACATCTCCAGCGAAGCCGGGGCTTCTGCGCTCCTCG
AGTATTAGATGGTTATGGCACCGACTGCTTGTGTACCTGCTGAAGTATGC
ACTCCTAAATACTACCAGGAGAAACACGACTATAATCTCAATTGGGATCA
TGGTCAATTCAGCAATCATGGAGGGGACGATTTATCGCAATCTAGGTTGG
CTGCCAAGGAACTAGTCTTGGACATCCTGAAGAAGCGCGCAGCTGAGGTC
AATGTGGACAGCTGCGCGCCAGGAGAGGAGGACCCGTTTTACGTGGCAGA
TATGGGGGAGGTCTACCGCCAGCATCTGCGCTGGAAAATGAACTTGAGCC
GTGTTCGGCCTTTCTACG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0006596polyamine biosynthetic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SPE1ASPNIDRAFT_54584Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54584-T1ASPNIDRAFT_54584-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54584-T1.cdsASPNIDRAFT_54584-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54584-T1.exon2ASPNIDRAFT_54584-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_54584-T1.exon1ASPNIDRAFT_54584-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54584-T1.utr5p1ASPNIDRAFT_54584-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09261V03
DBxrefInterPro:IPR022653
DBxrefInterPro:IPR022657
DBxrefInterPro:IPR029066
DBxrefInterPro:IPR009006
DBxrefInterPro:IPR022643
DBxrefInterPro:IPR022644
DBxrefInterPro:IPR000183
DBxrefInterPro:IPR002433
DBxrefPFAM:PF00278
DBxrefPFAM:PF02784
ProductOrnithine decarboxylase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000016.1supercontigACJE01000016.1:641456..643148 -
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