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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000016.1:689163..691221- Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_130434-T1 ID=ASPNIDRAFT_130434-T1|Name=ASPNIDRAFT_130434-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=2059bp|location=Sequence derived from alignment at ACJE01000016.1:689163..691221- (Aspergillus niger ATCC 1015)
GGAACCTCTGGCCAGGCCAAAAACTTTATTACCAGAACCCAGGCCGTGCG
CAAACTTCAGATTTCCCTCCCGGATTTCCGTCGACTATGTATCTTCAAGG
GTATGCATATCCTATTGATGGACTGAGGCATTGAGACATATACACGGTGC
TGATTCTTCTTCTTGTCGGAAAACAGGAATTTATCCCCGTGAGCCCCGGA
GCAAGAAGAAGGCCTCCAAGACCTCCACTCCCAACACCACTTTCTACTAC
ACGAAAGATATTCAGTTCCTCCTCCATGAGCCTCTCCTGAGAAAGTTTCG
TGACCAAAAGGCGCTTGCGAAGAAGATTGCCCGCTCCCTTGGACGTGGTG
AAGTCTCAGATGCGTCCCGTCTGGAGAAGAACCACGCGCCGAAACTCACC
TTGGATCACATCATCAAGGAGCGCTACCCGACCTTCATTGACGCTCTGAG
AGATCTTGACGATGCCCTGTCTCTGCTGTTCCTCTTTGCCAACCTCCCCT
CTTCTCCCCATGTCCCAGCCAAGACCATCGCTCTCTGCCAGCGGGTTACC
CACGAGTTCCAGCACTACCTGATCACCACGAACTCCCTGCGCAAATCTTT
CCTGTCGATCAAGGGTATCTACTACCAGGCAACCATCCAGGGACAGGACA
TCATGTGGCTTGTGCCCTACCGCTTCGTGCAGCGTGTCAACGGCGACGTC
GACTACCGTATCATGGCCACTTTCGTCGACTTCTACACCACTCTGCTCGG
ATTCGTCAACTACCGTCTTTACTCGACTCTTGGCCTTCGCTATCCCCCCA
AGTTCGATAAGAGGAGTGACGAGAATGGTGCTGAGTTGGCGGCTTTCACT
CTGGAGGGCCGCACCGTCGGCGAAACCCCCAAGGCTCTCGAAGCCAACAA
GCAGGCGAGCAAGCCTTCCAACCAGGAAGTCTCTAAGGAGGTTCAGGCCA
AGGTCGACAAGGTCATCAAGACCGCAGGCTTGGATCAGACGAAAGACGAG
CAAGTTACCGAGACAACCGAAGAAGCTTCCGAGGCGATCGATAAATTCGA
GCCTACTGCCCCCGAGGCCGACACTCTGCCCCAGCCCGACTTGAGCGGAG
ATGAGGCTGGCTCTCTGTTCGCACCTTTCGTTTTCTACATCTCCCGTGAG
GCTCCCAAGGCGCCCCTGGAGTTCATCCTCCGCTCCTTCGGCTGCAGCAG
GATCGGCTGGGACGCTGTCCTTGGCGACGGAGCTTTCACCCACGATGAGA
CGGATACTCGCATCACCCACCAGATTGTCGATCGTCCTTCTTTGCCCGAG
TCTTCGCTGCCCGCTATCCCTGCTGCTTCGACAGAGGGCGCTGCTCAGAA
GGTCAGACCGGGAACCCGCATCCCCGGCAGAACCTATGTCCAGCCCCAAT
GGGTGTGGGACTGCATCAACGAGGGCAAGCTCCTCCGTGCTGATCTGTAC
GCCCCAGGCGCTACTCTCCCCCCTCATTTGAGCCCTTGGGTCAAGCCTTC
CAAGGGTGGCTATGACCCTCGCGCCAGCTTGGCTGAGCAGGAGGAGGAAG
GTGAGGCAGAGCTGGACGAAGACAGCGACGAGGAGATGGAGGAAGCCGCT
GATGAGGAGAAGGCTGAGGCCAAGGATGAGGAGTCCGAGGCTGAAAGCGA
GGAAGAGGATGATATCAACGGTGGCATGGATGTTGCTGAGACTGATGAGG
ACGAGAGTGAGAGCGAGGAAGAGGACGAGGACTTTGGCGGATTCGATGAC
AACGAGGCCGCCTCTGAGTCTGAGGATGAAGAGGAAGCCGCCCGGACACA
GCACCAGAAGGAACTGGAGGCTGAGGCTGCTGGTCTTCCCTTCTCGTCTG
GTGGCGGTGCTGGCGAAGCAGCCAAGAAGAAGTCCGCTCAGGCTAAGAAG
ATCGCCTCCAAGAAGCGCAAGGAGGAGGAAGAGCTGGAGAGACAGAAGAT
GATGATGAGCCGGAAGAAGCGCAAGCTCCTCGAAAAGATGATGTACTCGA
ACAAGCAGAAGTCTGAGGAGGCTGCCAAGCTGCGGTCCAAGAGGAGAAAG
CTTGAGAAG back to topCoding sequence (CDS) from alignment at ACJE01000016.1:689163..691221- >ASPNIDRAFT_130434-T1 ID=ASPNIDRAFT_130434-T1|Name=ASPNIDRAFT_130434-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3960bp|location=Sequence derived from alignment at ACJE01000016.1:689163..691221- (Aspergillus niger ATCC 1015)
GAATTTATCCCCGTGAGCCCCGGAGCAAGAAGAAGGCCTCCAAGACCTCC
ACTCCCAACACCACTTTCTACTACACGAAAGATATTCAGTTCCTCCTCCA
TGAGCCTCTCCTGAGAAAGTTTCGTGACCAAAAGGCGCTTGCGAAGAAGA
TTGCCCGCTCCCTTGGACGTGGTGAAGTCTCAGATGCGTCCCGTCTGGAG
AAGAACCACGCGCCGAAACTCACCTTGGATCACATCATCAAGGAGCGCTA
CCCGACCTTCATTGACGCTCTGAGAGATCTTGACGATGCCCTGTCTCTGC
TGTTCCTCTTTGCCAACCTCCCCTCTTCTCCCCATGTCCCAGCCAAGACC
ATCGCTCTCTGCCAGCGGGTTACCCACGAGTTCCAGCACTACCTGATCAC
CACGAACTCCCTGCGCAAATCTTTCCTGTCGATCAAGGGTATCTACTACC
AGGCAACCATCCAGGGACAGGACATCATGTGGCTTGTGCCCTACCGCTTC
GTGCAGCGTGTCAACGGCGACGTCGACTACCGTATCATGGCCACTTTCGT
CGACTTCTACACCACTCTGCTCGGATTCGTCAACTACCGTCTTTACTCGA
CTCTTGGCCTTCGCTATCCCCCCAAGTTCGATAAGAGGAGTGACGAGAAT
GGTGCTGAGTTGGCGGCTTTCACTCTGGAGGGCCGCACCGTCGGCGAAAC
CCCCAAGGCTCTCGAAGCCAACAAGCAGGCGAGCAAGCCTTCCAACCAGG
AAGTCTCTAAGGAGGTTCAGGCCAAGGTCGACAAGGTCATCAAGACCGCA
GGCTTGGATCAGACGAAAGACGAGCAAGTTACCGAGACAACCGAAGAAGC
TTCCGAGGCGATCGATAAATTCGAGCCTACTGCCCCCGAGGCCGACACTC
TGCCCCAGCCCGACTTGAGCGGAGATGAGGCTGGCTCTCTGTTCGCACCT
TTCGTTTTCTACATCTCCCGTGAGGCTCCCAAGGCGCCCCTGGAGTTCAT
CCTCCGCTCCTTCGGCTGCAGCAGGATCGGCTGGGACGCTGTCCTTGGCG
ACGGAGCTTTCACCCACGATGAGACGGATACTCGCATCACCCACCAGATT
GTCGATCGTCCTTCTTTGCCCGAGTCTTCGCTGCCCGCTATCCCTGCTGC
TTCGACAGAGGGCGCTGCTCAGAAGGTCAGACCGGGAACCCGCATCCCCG
GCAGAACCTATGTCCAGCCCCAATGGGTGTGGGACTGCATCAACGAGGGC
AAGCTCCTCCGTGCTGATCTGTACGCCCCAGGCGCTACTCTCCCCCCTCA
TTTGAGCCCTTGGGTCAAGCCTTCCAAGGGTGGCTATGACCCTCGCGCCA
GCTTGGCTGAGCAGGAGGAGGAAGGTGAGGCAGAGCTGGACGAAGACAGC
GACGAGGAGATGGAGGAAGCCGCTGATGAGGAGAAGGCTGAGGCCAAGGA
TGAGGAGTCCGAGGCTGAAAGCGAGGAAGAGGATGATATCAACGGTGGCA
TGGATGTTGCTGAGACTGATGAGGACGAGAGTGAGAGCGAGGAAGAGGAC
GAGGACTTTGGCGGATTCGATGACAACGAGGCCGCCTCTGAGTCTGAGGA
TGAAGAGGAAGCCGCCCGGACACAGCACCAGAAGGAACTGGAGGCTGAGG
CTGCTGGTCTTCCCTTCTCGTCTGGTGGCGGTGCTGGCGAAGCAGCCAAG
AAGAAGTCCGCTCAGGCTAAGAAGATCGCCTCCAAGAAGCGCAAGGAGGA
GGAAGAGCTGGAGAGACAGAAGATGATGATGAGCCGGAAGAAGCGCAAGC
TCCTCGAAAAGATGATGTACTCGAACAAGCAGAAGTCTGAGGAGGCTGCC
AAGCTGCGGTCCAAGAGGAGAAAGCTTGAGGGAACCTCTGGCCAGGCCAA
AAACTTTATTACCAGAACCCAGGCCGTGCGCAAACTTCAGATTTCCCTCC
CGGATTTCCGTCGACTATGTATCTTCAAGGGAATTTATCCCCGTGAGCCC
CGGAGCAAGAAGAAGGCCTCCAAGACCTCCACTCCCAACACCACTTTCTA
CTACACGAAAGATATTCAGTTCCTCCTCCATGAGCCTCTCCTGAGAAAGT
TTCGTGACCAAAAGGCGCTTGCGAAGAAGATTGCCCGCTCCCTTGGACGT
GGTGAAGTCTCAGATGCGTCCCGTCTGGAGAAGAACCACGCGCCGAAACT
CACCTTGGATCACATCATCAAGGAGCGCTACCCGACCTTCATTGACGCTC
TGAGAGATCTTGACGATGCCCTGTCTCTGCTGTTCCTCTTTGCCAACCTC
CCCTCTTCTCCCCATGTCCCAGCCAAGACCATCGCTCTCTGCCAGCGGGT
TACCCACGAGTTCCAGCACTACCTGATCACCACGAACTCCCTGCGCAAAT
CTTTCCTGTCGATCAAGGGTATCTACTACCAGGCAACCATCCAGGGACAG
GACATCATGTGGCTTGTGCCCTACCGCTTCGTGCAGCGTGTCAACGGCGA
CGTCGACTACCGTATCATGGCCACTTTCGTCGACTTCTACACCACTCTGC
TCGGATTCGTCAACTACCGTCTTTACTCGACTCTTGGCCTTCGCTATCCC
CCCAAGTTCGATAAGAGGAGTGACGAGAATGGTGCTGAGTTGGCGGCTTT
CACTCTGGAGGGCCGCACCGTCGGCGAAACCCCCAAGGCTCTCGAAGCCA
ACAAGCAGGCGAGCAAGCCTTCCAACCAGGAAGTCTCTAAGGAGGTTCAG
GCCAAGGTCGACAAGGTCATCAAGACCGCAGGCTTGGATCAGACGAAAGA
CGAGCAAGTTACCGAGACAACCGAAGAAGCTTCCGAGGCGATCGATAAAT
TCGAGCCTACTGCCCCCGAGGCCGACACTCTGCCCCAGCCCGACTTGAGC
GGAGATGAGGCTGGCTCTCTGTTCGCACCTTTCGTTTTCTACATCTCCCG
TGAGGCTCCCAAGGCGCCCCTGGAGTTCATCCTCCGCTCCTTCGGCTGCA
GCAGGATCGGCTGGGACGCTGTCCTTGGCGACGGAGCTTTCACCCACGAT
GAGACGGATACTCGCATCACCCACCAGATTGTCGATCGTCCTTCTTTGCC
CGAGTCTTCGCTGCCCGCTATCCCTGCTGCTTCGACAGAGGGCGCTGCTC
AGAAGGTCAGACCGGGAACCCGCATCCCCGGCAGAACCTATGTCCAGCCC
CAATGGGTGTGGGACTGCATCAACGAGGGCAAGCTCCTCCGTGCTGATCT
GTACGCCCCAGGCGCTACTCTCCCCCCTCATTTGAGCCCTTGGGTCAAGC
CTTCCAAGGGTGGCTATGACCCTCGCGCCAGCTTGGCTGAGCAGGAGGAG
GAAGGTGAGGCAGAGCTGGACGAAGACAGCGACGAGGAGATGGAGGAAGC
CGCTGATGAGGAGAAGGCTGAGGCCAAGGATGAGGAGTCCGAGGCTGAAA
GCGAGGAAGAGGATGATATCAACGGTGGCATGGATGTTGCTGAGACTGAT
GAGGACGAGAGTGAGAGCGAGGAAGAGGACGAGGACTTTGGCGGATTCGA
TGACAACGAGGCCGCCTCTGAGTCTGAGGATGAAGAGGAAGCCGCCCGGA
CACAGCACCAGAAGGAACTGGAGGCTGAGGCTGCTGGTCTTCCCTTCTCG
TCTGGTGGCGGTGCTGGCGAAGCAGCCAAGAAGAAGTCCGCTCAGGCTAA
GAAGATCGCCTCCAAGAAGCGCAAGGAGGAGGAAGAGCTGGAGAGACAGA
AGATGATGATGAGCCGGAAGAAGCGCAAGCTCCTCGAAAAGATGATGTAC
TCGAACAAGCAGAAGTCTGAGGAGGCTGCCAAGCTGCGGTCCAAGAGGAG
AAAGCTTGAGGGAACCTCTGGCCAGGCCAAAAACTTTATTACCAGAACCC
AGGCCGTGCGCAAACTTCAGATTTCCCTCCCGGATTTCCGTCGACTATGT
ATCTTCAAGG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005730 | nucleolus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0042254 | ribosome biogenesis |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09261L4M |
| DBxref | InterPro:IPR001357 |
| DBxref | InterPro:IPR036420 |
| DBxref | InterPro:IPR010613 |
| DBxref | PFAM:PF06732 |
| Product | mRNA-binding ribosome synthesis protein nop7 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000016.1 | supercontig | ACJE01000016.1:689163..691221 - |
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