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ASPNIDRAFT_135687-T1, ASPNIDRAFT_135687-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_135687-T1
Unique NameASPNIDRAFT_135687-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000016.1:1759248..1760243+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_135687-T1 ID=ASPNIDRAFT_135687-T1|Name=ASPNIDRAFT_135687-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=996bp|location=Sequence derived from alignment at ACJE01000016.1:1759248..1760243+ (Aspergillus niger ATCC 1015)
CTCCAACCAACCAGAGTCTACTTCATCCCCTCCAACCCAAATGCATCCAC
AGGGCTAGCGACTATCACAGAGCGCCTACACACAGCCCTAGCAGACGAGC
CAACATTAGTAGGCCGTTGGTTCCTCGAACACCGACTGATGCGCGATACT
CCATCATGTGTTCCTGCCTCAGCATCCCAGCGCCAAGTACAACCGCGCTA
TATGCAATTCCTATCACTGTCTTTTCACTCTAACCACGGCTTCATCTACA
CCTCTGAAGCACTAGAGAAAAGCACTCATCATTCCACCACCAGTGTTAGC
ACCACGCCAGCTGGCTCACCCACCAATTCTACTGCTCAAAGTGGAGCTCC
AGGCGCAACAGCGCCCACCCCTTCCACCCCATCTAATGCTGCTGCACAGT
CAGGAGGACCAATGGTGATGACCACCGTGCCGCTTCCATCCTGTAATGCA
CTTTTCCAGCACTTCGGCTACGCCTGCCAGCCTTTCTGGTGCCATCGACA
CACGGTAACCGTACCAGGCGGTGTGGTCTACGATGTGGGCGATTTCCGAG
TCCGAGTGGGTGATGTACGACAGACTCAGCCAGCAGCGAGGGTGCGCGGA
ACAGTTGTGGAAATTGAATGGCGGGGTCCGTGCATAGTTGATGCGATTTC
AGCACCACGGAATTCGAGCGACGGACAAATAGCTGATGATGGCGACTCCG
GGATTGATATGGCGTTCCCGGATGCTATTGAAGACGCGGATATTGATGCA
GAGTATGCGGCTAGTGCGGCGTTGATTAGGGAGTTCTGGGCGAGACTCGG
CATTGAAGGAGCCAGAGAAGCTATTTTGTTGCCGGATGTAGGCAAGGAAG
CCAAGGATCGGTTGAGGAGATTGAAGCAGAAGGGCCGAAATACTGTTTCT
AACGAGGCGAGTCTACAGCAAGCGGAGGAGGATCCGGATCCGGATGCGGG
TGTGGATGTGGCGAGGCAGTTTATGGAGATTTTTAGGTTTAATCGG
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Coding sequence (CDS) from alignment at ACJE01000016.1:1759248..1760243+

>ASPNIDRAFT_135687-T1 ID=ASPNIDRAFT_135687-T1|Name=ASPNIDRAFT_135687-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1854bp|location=Sequence derived from alignment at ACJE01000016.1:1759248..1760243+ (Aspergillus niger ATCC 1015)
CTCCAACCAACCAGAGTCTACTTCATCCCCTCCAACCCAAATGCATCCAC
AGGGCTAGCGACTATCACAGAGCGCCTACACACAGCCCTAGCAGACGAGC
CAACATTAGTAGGCCGTTGGTTCCTCGAACACCGACTGATGCGCGATACT
CCATCATGTGTTCCTGCCTCAGCATCCCAGCGCCAAGTACAACCGCGCTA
TATGCAATTCCTATCACTGTCTTTTCACTCTAACCACGGCTTCATCTACA
CCTCTGAAGCACTAGAGAAAAGCACTCATCATTCCACCACCACGCCCACC
CCTTCCACCCCATCTAATGCTGCTGCACAGTCAGGAGGACCAATGGTGAT
GACCACCGTGCCGCTTCCATCCTGTAATGCACTTTTCCAGCACTTCGGCT
ACGCCTGCCAGCCTTTCTGGTGCCATCGACACACGGTAACCGTACCAGGC
GGTGTGGTCTACGATGTGGGCGATTTCCGAGTCCGAGTGGGTGATGTACG
ACAGACTCAGCCAGCAGCGAGGGTGCGCGGAACAGTTGTGGAAATTGAAT
GGCGGGGTCCGTGCATAGTTGATGCGATTTCAGCACCACGGAATTCGAGC
GACGGACAAATAGCTGATGATGGCGACTCCGGGATTGATATGGCGTTCCC
GGATGCTATTGAAGACGCGGATATTGATGCAGAGTATGCGGCTAGTGCGG
CGTTGATTAGGGAGTTCTGGGCGAGACTCGGCATTGAAGGAGCCAGAGAA
GCTATTTTGTTGCCGGATGTAGGCAAGGAAGCCAAGGATCGGTTGAGGAG
ATTGAAGCAGAAGGGCCGAAATACTGTTTCTAACGAGGCGAGTCTACAGC
AAGCGGAGGAGGATCCGGATCCGGATGCGGGTGTGGATGTGGCGAGGCAG
TTTATGGAGATTTTTAGGTTTAATCGGCTCCAACCAACCAGAGTCTACTT
CATCCCCTCCAACCCAAATGCATCCACAGGGCTAGCGACTATCACAGAGC
GCCTACACACAGCCCTAGCAGACGAGCCAACATTAGTAGGCCGTTGGTTC
CTCGAACACCGACTGATGCGCGATACTCCATCATGTGTTCCTGCCTCAGC
ATCCCAGCGCCAAGTACAACCGCGCTATATGCAATTCCTATCACTGTCTT
TTCACTCTAACCACGGCTTCATCTACACCTCTGAAGCACTAGAGAAAAGC
ACTCATCATTCCACCACCACGCCCACCCCTTCCACCCCATCTAATGCTGC
TGCACAGTCAGGAGGACCAATGGTGATGACCACCGTGCCGCTTCCATCCT
GTAATGCACTTTTCCAGCACTTCGGCTACGCCTGCCAGCCTTTCTGGTGC
CATCGACACACGGTAACCGTACCAGGCGGTGTGGTCTACGATGTGGGCGA
TTTCCGAGTCCGAGTGGGTGATGTACGACAGACTCAGCCAGCAGCGAGGG
TGCGCGGAACAGTTGTGGAAATTGAATGGCGGGGTCCGTGCATAGTTGAT
GCGATTTCAGCACCACGGAATTCGAGCGACGGACAAATAGCTGATGATGG
CGACTCCGGGATTGATATGGCGTTCCCGGATGCTATTGAAGACGCGGATA
TTGATGCAGAGTATGCGGCTAGTGCGGCGTTGATTAGGGAGTTCTGGGCG
AGACTCGGCATTGAAGGAGCCAGAGAAGCTATTTTGTTGCCGGATGTAGG
CAAGGAAGCCAAGGATCGGTTGAGGAGATTGAAGCAGAAGGGCCGAAATA
CTGTTTCTAACGAGGCGAGTCTACAGCAAGCGGAGGAGGATCCGGATCCG
GATGCGGGTGTGGATGTGGCGAGGCAGTTTATGGAGATTTTTAGGTTTAA
TCGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016592mediator complex
Vocabulary: Molecular Function
TermDefinition
GO:0003712transcription coregulator activity
Vocabulary: Biological Process
TermDefinition
GO:0006357regulation of transcription by RNA polymerase II
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_135687ASPNIDRAFT_135687Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_135687-T1.exon1ASPNIDRAFT_135687-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_135687-T1.exon2ASPNIDRAFT_135687-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_135687-T1.cdsASPNIDRAFT_135687-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_135687-T1ASPNIDRAFT_135687-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR013921
DBxrefPFAM:PF08612
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000016.1supercontigACJE01000016.1:1759248..1760243 +
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