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ASPNIDRAFT_214784-T1, ASPNIDRAFT_214784-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_214784-T1
Unique NameASPNIDRAFT_214784-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000017.1:178079..179756+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_214784-T1 ID=ASPNIDRAFT_214784-T1|Name=ASPNIDRAFT_214784-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1678bp|location=Sequence derived from alignment at ACJE01000017.1:178079..179756+ (Aspergillus niger ATCC 1015)
AACATGTCGATGGACCTGGATGCGCCGGTGCCTTTCGAGGCCATCCCGCA
AGATCAGATCGCTGCGACGTGAGTTACCCCGCAAATTAAAAGAAAATTTC
TCTATAAACATACACGAGGGGCAGTATGATCGAGGACTTCAACTAACAAA
TGTGCTTAATAGTATCCTTTGTTGCAACTGTGGCGCGCCCATCGATGGAA
CAACATCCGCAGGCGCCCTTTGCCAGGACTGTGTGAAATTGACGGTTGAT
ATCTCCCAGGGCATCCAGAGAGAGGCAGTTCTCCACTGCTGCAAGGACTG
CGAGCGGTGGCTTCAACCTCCCACCAGCTGGGTTAGTGCTGCGCTCGAAT
CGAAGGAACTCCTCGCACACTGCTTGCGCAAGCTCCGCGGCTTGTCCAAG
GTTCGCATTATCGATGCCAGCTTCATCTGGACCGAACCCCACTCGAAGCG
TATTAAGGTCAAGATCACCATCCAGCAGGAGGCATTCCAGGGCACCATTG
TGCAGCAGACTTTCGAGGTTGAATACGTTGTCGCCTCGCTACAATGCCCT
GACTGCAAGAAGTCGTTCACTGTCAACACTTGGAACTCCAGCATTCAGCT
GCGCCAGAAGGTGCCTCACAAGCGAACCTTCTTGTACCTTGAGCAAATCA
TCCTCAAGCACAACGCTCACCGCGATACAATCAACATCAAGGAGGCCAAG
GACGGTTTGGATTTCTACTTTGCGCAGAGGAATCATGCGGAGAAGATGGT
CGAGTTCCTCTCCTCCGTCGTCCCCACCAAGGTCAAGAAGTCGCAGGAGC
TTATCTCCATGGATATTCACACCTCCACGAAGTCATACAAGTTCACCTTC
TCGATTGAATTGATCCCTATCTGCAAGGATGATTTGGTTGCGCTGCCCAT
CAAACTTGCCAGATCACTGGGCAACATCTCGCCCCTGGCCCTCTGCTACC
GCGTCGGTACCTCTGTCAACCTTCTCGACCCCAACACGCTCCAGACCGCC
GATGTCCCGACAAACACCTACTGGAGATCACCCTTCAGGAGTCTTGCCGA
TGTGACGGAGCTGACCGAGTTCATCATCATGGATATTGAGCTGGTTGGAC
GGTCGAACGGACGGTTCTATCTGGCCGAGGCAACTGTTGCCCGTGCCTCG
GATCTTGGCTCGAACGATCAAACCTATTTCACCCGCACCCACCTGGGTGG
AGTACTCCACGTCGGTGACTCTGTTCTCGGTTACCACCTGACTGGTACCA
ATTTTAACGACCCCAACTTCGAGGCGATCGAGGCTAGTGGCCAGTACAGC
TCCGCGATTCCCGACGTTGTGCTCGTGAAGAAGTTCTATGCCCGCAAGAA
GAAGAACAAGAACCGCAACTGGCGTCTTAAGCGCATGGCTCTTGAGTACG
AGGAGGAGGCGGCCCAGCAAGCTGCTGGCAACCTCAACCGTAAGCAGGAA
GCCGAGCGCAACCGCCTTGAAGAGGACTTTGAGATGTTCTTGCGCGATGT
TGAAGAGGATCAGGAATTGCGTGGCACTCTTGATCTGTACAAGGCACGGA
ACCGTGCCCCCGTGGAGCACGGTGGTATGGATATGGATGAGGATAGCGAA
GATGATGAGGTGCCCAAGATCAACATGGATGAGCTGCTTGATGACTTTGA
CGAGTTGAACATGGACGATGACCATTAA
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Coding sequence (CDS) from alignment at ACJE01000017.1:178079..179756+

>ASPNIDRAFT_214784-T1 ID=ASPNIDRAFT_214784-T1|Name=ASPNIDRAFT_214784-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3162bp|location=Sequence derived from alignment at ACJE01000017.1:178079..179756+ (Aspergillus niger ATCC 1015)
ATGTCGATGGACCTGGATGCGCCGGTGCCTTTCGAGGCCATCCCGCAAGA
TCAGATCGCTGCGACTATCCTTTGTTGCAACTGTGGCGCGCCCATCGATG
GAACAACATCCGCAGGCGCCCTTTGCCAGGACTGTGTGAAATTGACGGTT
GATATCTCCCAGGGCATCCAGAGAGAGGCAGTTCTCCACTGCTGCAAGGA
CTGCGAGCGGTGGCTTCAACCTCCCACCAGCTGGGTTAGTGCTGCGCTCG
AATCGAAGGAACTCCTCGCACACTGCTTGCGCAAGCTCCGCGGCTTGTCC
AAGGTTCGCATTATCGATGCCAGCTTCATCTGGACCGAACCCCACTCGAA
GCGTATTAAGGTCAAGATCACCATCCAGCAGGAGGCATTCCAGGGCACCA
TTGTGCAGCAGACTTTCGAGGTTGAATACGTTGTCGCCTCGCTACAATGC
CCTGACTGCAAGAAGTCGTTCACTGTCAACACTTGGAACTCCAGCATTCA
GCTGCGCCAGAAGGTGCCTCACAAGCGAACCTTCTTGTACCTTGAGCAAA
TCATCCTCAAGCACAACGCTCACCGCGATACAATCAACATCAAGGAGGCC
AAGGACGGTTTGGATTTCTACTTTGCGCAGAGGAATCATGCGGAGAAGAT
GGTCGAGTTCCTCTCCTCCGTCGTCCCCACCAAGGTCAAGAAGTCGCAGG
AGCTTATCTCCATGGATATTCACACCTCCACGAAGTCATACAAGTTCACC
TTCTCGATTGAATTGATCCCTATCTGCAAGGATGATTTGGTTGCGCTGCC
CATCAAACTTGCCAGATCACTGGGCAACATCTCGCCCCTGGCCCTCTGCT
ACCGCGTCGGTACCTCTGTCAACCTTCTCGACCCCAACACGCTCCAGACC
GCCGATGTCCCGACAAACACCTACTGGAGATCACCCTTCAGGAGTCTTGC
CGATGTGACGGAGCTGACCGAGTTCATCATCATGGATATTGAGCTGGTTG
GACGGTCGAACGGACGGTTCTATCTGGCCGAGGCAACTGTTGCCCGTGCC
TCGGATCTTGGCTCGAACGATCAAACCTATTTCACCCGCACCCACCTGGG
TGGAGTACTCCACGTCGGTGACTCTGTTCTCGGTTACCACCTGACTGGTA
CCAATTTTAACGACCCCAACTTCGAGGCGATCGAGGCTAGTGGCCAGTAC
AGCTCCGCGATTCCCGACGTTGTGCTCGTGAAGAAGTTCTATGCCCGCAA
GAAGAAGAACAAGAACCGCAACTGGCGTCTTAAGCGCATGGCTCTTGAGT
ACGAGGAGGAGGCGGCCCAGCAAGCTGCTGGCAACCTCAACCGTAAGCAG
GAAGCCGAGCGCAACCGCCTTGAAGAGGACTTTGAGATGTTCTTGCGCGA
TGTTGAAGAGGATCAGGAATTGCGTGGCACTCTTGATCTGTACAAGGCAC
GGAACCGTGCCCCCGTGGAGCACGGTGGTATGGATATGGATGAGGATAGC
GAAGATGATGAGGTGCCCAAGATCAACATGGATGAGCTGCTTGATGACTT
TGACGAGTTGAACATGGACGATGACCATTAAATGTCGATGGACCTGGATG
CGCCGGTGCCTTTCGAGGCCATCCCGCAAGATCAGATCGCTGCGACTATC
CTTTGTTGCAACTGTGGCGCGCCCATCGATGGAACAACATCCGCAGGCGC
CCTTTGCCAGGACTGTGTGAAATTGACGGTTGATATCTCCCAGGGCATCC
AGAGAGAGGCAGTTCTCCACTGCTGCAAGGACTGCGAGCGGTGGCTTCAA
CCTCCCACCAGCTGGGTTAGTGCTGCGCTCGAATCGAAGGAACTCCTCGC
ACACTGCTTGCGCAAGCTCCGCGGCTTGTCCAAGGTTCGCATTATCGATG
CCAGCTTCATCTGGACCGAACCCCACTCGAAGCGTATTAAGGTCAAGATC
ACCATCCAGCAGGAGGCATTCCAGGGCACCATTGTGCAGCAGACTTTCGA
GGTTGAATACGTTGTCGCCTCGCTACAATGCCCTGACTGCAAGAAGTCGT
TCACTGTCAACACTTGGAACTCCAGCATTCAGCTGCGCCAGAAGGTGCCT
CACAAGCGAACCTTCTTGTACCTTGAGCAAATCATCCTCAAGCACAACGC
TCACCGCGATACAATCAACATCAAGGAGGCCAAGGACGGTTTGGATTTCT
ACTTTGCGCAGAGGAATCATGCGGAGAAGATGGTCGAGTTCCTCTCCTCC
GTCGTCCCCACCAAGGTCAAGAAGTCGCAGGAGCTTATCTCCATGGATAT
TCACACCTCCACGAAGTCATACAAGTTCACCTTCTCGATTGAATTGATCC
CTATCTGCAAGGATGATTTGGTTGCGCTGCCCATCAAACTTGCCAGATCA
CTGGGCAACATCTCGCCCCTGGCCCTCTGCTACCGCGTCGGTACCTCTGT
CAACCTTCTCGACCCCAACACGCTCCAGACCGCCGATGTCCCGACAAACA
CCTACTGGAGATCACCCTTCAGGAGTCTTGCCGATGTGACGGAGCTGACC
GAGTTCATCATCATGGATATTGAGCTGGTTGGACGGTCGAACGGACGGTT
CTATCTGGCCGAGGCAACTGTTGCCCGTGCCTCGGATCTTGGCTCGAACG
ATCAAACCTATTTCACCCGCACCCACCTGGGTGGAGTACTCCACGTCGGT
GACTCTGTTCTCGGTTACCACCTGACTGGTACCAATTTTAACGACCCCAA
CTTCGAGGCGATCGAGGCTAGTGGCCAGTACAGCTCCGCGATTCCCGACG
TTGTGCTCGTGAAGAAGTTCTATGCCCGCAAGAAGAAGAACAAGAACCGC
AACTGGCGTCTTAAGCGCATGGCTCTTGAGTACGAGGAGGAGGCGGCCCA
GCAAGCTGCTGGCAACCTCAACCGTAAGCAGGAAGCCGAGCGCAACCGCC
TTGAAGAGGACTTTGAGATGTTCTTGCGCGATGTTGAAGAGGATCAGGAA
TTGCGTGGCACTCTTGATCTGTACAAGGCACGGAACCGTGCCCCCGTGGA
GCACGGTGGTATGGATATGGATGAGGATAGCGAAGATGATGAGGTGCCCA
AGATCAACATGGATGAGCTGCTTGATGACTTTGACGAGTTGAACATGGAC
GATGACCATTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NMD3ASPNIDRAFT_214784Aspergillus niger ATCC 1015gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_214784-T1.utr5p1ASPNIDRAFT_214784-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_214784-T1.exon1ASPNIDRAFT_214784-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_214784-T1.exon2ASPNIDRAFT_214784-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_214784-T1.cdsASPNIDRAFT_214784-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_214784-T1ASPNIDRAFT_214784-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09262CA4
DBxrefInterPro:IPR007064
DBxrefPFAM:PF04981
Productribosome-binding protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000017.1supercontigACJE01000017.1:178079..179756 +
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