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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000019.1:245426..246389- Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_208562-T1 ID=ASPNIDRAFT_208562-T1|Name=ASPNIDRAFT_208562-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=964bp|location=Sequence derived from alignment at ACJE01000019.1:245426..246389- (Aspergillus niger ATCC 1015)
ATGTCCGCTTCAAATCCCCCCTCACAGTCCGAATACGTGACCCTAGTATC
CGGTGATGGATTCGAATTCGTCATCCCGCGCAGCACAGCCTGCGTGTCGG
GGACGATACGTCGCATGTTAGAGCCGTCTAGTGAGTCTTGTCTCCTCACA
TGTGTGTTTCAGTGGTGGCACTTGCTAACAACTCCATTACTATATAGGTC
GCTTCTCGGAATCCGTTACCGGTCGATGCGTCCTCGAGAATATTAGCGGT
ATTGTGCTTGAAAAAGTATGCGAGTATTTCTGCTACAATGAGAAGAATAA
GAACCAGACATATGTTCCGGATATGGATATCCCGCCGGAGTTGTGTTTGG
AATTGTTGATGGCGGCGGATTATTTGGATGCGTGAGGTGATTTGATCTGA
TCCGTGGGACTTTCTATAGTGTAGGTGAGTTGAATTAGGTTGCGTTGGTT
GGCGTGGGGGTTAGTACTGATTGTGGCACTAGGTTTATTGCAGTGGGCTG
GCTTGGGTTTACGAATAACGCGACACGATGGCTCTATGCTTCTATTGTAT
ATCTTATGGAGTTTGGTGGTTGTGGTTTGGTTTCAGCCTTTTCACACGGT
AGGGTGGCGTTAGAATCTGGGTATAGAACTTGGAAGAATAGACGGGTATC
TCGCTGTCTTTTGTCCCTGTTTCGGACTTTTCCCACCGCATATTTGATCT
TGCTTGGTCAGTGAGCTGTAAATGCCACTGCCTCGCCATCTGAGCATCTA
TATCCGTTCTTTGTGCCCTGTGGACGGATATACTAAAGATGATGGCAGAT
TGTTACCATCCCCTCTATTCAGTCCGCGTCCTTTCTGGTGGATCTCAGGC
CTTATTCCAGGGGAGAAATGCTCTTATCCCTTCAGTTGCTATATTTAGCA
TGAGTTGTATAATGGAACTTCACGCCCTCAGCGCCCTTTTGGCCGTGGAC
GCCAGGGTCCCTTG back to topCoding sequence (CDS) from alignment at ACJE01000019.1:245426..246389- >ASPNIDRAFT_208562-T1 ID=ASPNIDRAFT_208562-T1|Name=ASPNIDRAFT_208562-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=636bp|location=Sequence derived from alignment at ACJE01000019.1:245426..246389- (Aspergillus niger ATCC 1015)
GTCGCTTCTCGGAATCCGTTACCGGTCGATGCGTCCTCGAGAATATTAGC
GGTATTGTGCTTGAAAAAGTATGCGAGTATTTCTGCTACAATGAGAAGAA
TAAGAACCAGACATATGTTCCGGATATGGATATCCCGCCGGAGTTGTGTT
TGGAATTGTTGATGGCGGCGGATTATTTGGATGCGTGAATGTCCGCTTCA
AATCCCCCCTCACAGTCCGAATACGTGACCCTAGTATCCGGTGATGGATT
CGAATTCGTCATCCCGCGCAGCACAGCCTGCGTGTCGGGGACGATACGTC
GCATGTTAGAGCCGTCTAGTCGCTTCTCGGAATCCGTTACCGGTCGATGC
GTCCTCGAGAATATTAGCGGTATTGTGCTTGAAAAAGTATGCGAGTATTT
CTGCTACAATGAGAAGAATAAGAACCAGACATATGTTCCGGATATGGATA
TCCCGCCGGAGTTGTGTTTGGAATTGTTGATGGCGGCGGATTATTTGGAT
GCGTGAATGTCCGCTTCAAATCCCCCCTCACAGTCCGAATACGTGACCCT
AGTATCCGGTGATGGATTCGAATTCGTCATCCCGCGCAGCACAGCCTGCG
TGTCGGGGACGATACGTCGCATGTTAGAGCCGTCTA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006511 | ubiquitin-dependent protein catabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09265QTV |
| DBxref | InterPro:IPR011333 |
| DBxref | InterPro:IPR016073 |
| DBxref | InterPro:IPR001232 |
| DBxref | PFAM:PF03931 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000019.1 | supercontig | ACJE01000019.1:245426..246389 - |
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