You are here

Home

ASPNIDRAFT_178892-T1, ASPNIDRAFT_178892-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_178892-T1
Unique NameASPNIDRAFT_178892-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000019.1:2465130..2466363+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_178892-T1 ID=ASPNIDRAFT_178892-T1|Name=ASPNIDRAFT_178892-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1234bp|location=Sequence derived from alignment at ACJE01000019.1:2465130..2466363+ (Aspergillus niger ATCC 1015)
ATGCGCTCCCTCCTCTCCGTCCTCTCCCGGACGGGCTCAAGAACCACTCC
CCTACGCCCCACATCCTCAATCCTGCGCACCGCTCTCAACAGAACAGGAA
CAGCAGCAGGACCGGACTCCCTCTGCACGCGCTGCCTCCGCCGCACCAAC
AACACCACCCAACTTCGCTTCTACAACAACAACCAATTTACCGACGACCA
GCGCTGGCTCTCCGTCGTCGATGCCCCCTCTCAAGTCGTCCGCACAGGCC
GGAAACATGGTCCGGGACTGATCATTCTCGGTGCGCTATAACCCCGTCCA
TTCCAACCTCATAACCATAGACTAACATACAATGATGAAATACAGCACTA
ATCCCCATAATCTCCTTCGCCCTCGGAACATGGCAAATTCAACGCCTAGA
GTGGAAAACGAACCTAATTGCCAAATTCGAAGACCGGCTAATCAAGCCCC
CGCTGCCTCTACCCCCGCGGGTCGACCCGTCCGCGATCTCCGAGTTCGAT
TACCGCCGTGTCGTCGCGACGGGGACGCTGCGACATGATCAGGAGATGCT
GGTGGGTCCGCGCATGCGGGAGGGCCAGGATGGGTTCTTTGTGGTGACGC
CGCTGGAGCGCGAGGGTGGGAGTACGGTGTTGGTGAATCGGGGGTGGATT
AGTCGGAAGATGAAGGAGAAGAGGGATAGATTGAGGCAGGGGGAAGGGAG
GGCGCTGCCGGAGGGAGAGGTCGTGGTGGAGGGATTGTTGAGGGAACCGT
GGAAGAAGAATATGTTTACGCCGGATAATGTGCCGGCTGAGGGAAAGTTT
TATTTCCCTGATATTGAGCAGATGGCGGAGTTGACGGGGAGTCAGCCCGT
TTGGATTGAGGAGACTATGGGTATGTTATTCTTCCTGCTTCACTTTGTCC
TTTCGACTTGGTTTGGCTTCGGCTATGTATTGGGATGAAGAAGCTAATCT
AGGATGCTGGATCAGTCCCCGATATGGTTGAGGCGATGGATCGCGAGGCC
AAGGGTATTCCTATTGGCCGTGCTGCTGAAGTCAACCTCAAGAACAACCA
CAGTCAGTATATCTTTACTTGGTAGGTTTCCCTTCCTCCGTTCCTCCCCG
GATGCTGCATGGCTGCCTGGGATCCTGGCTAACGGCTGCGCAGGTACGGC
TTGTCGTTGGCAACCTCCATCATGCTGTGGATGATCATCCGCAAGCGTCC
CAACGAGGCTACTCGGCGTGTGCGCCAGAACCGG
back to top

Coding sequence (CDS) from alignment at ACJE01000019.1:2465130..2466363+

>ASPNIDRAFT_178892-T1 ID=ASPNIDRAFT_178892-T1|Name=ASPNIDRAFT_178892-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=4008bp|location=Sequence derived from alignment at ACJE01000019.1:2465130..2466363+ (Aspergillus niger ATCC 1015)
ATGCGCTCCCTCCTCTCCGTCCTCTCCCGGACGGGCTCAAGAACCACTCC
CCTACGCCCCACATCCTCAATCCTGCGCACCGCTCTCAACAGAACAGGAA
CAGCAGCAGGACCGGACTCCCTCTGCACGCGCTGCCTCCGCCGCACCAAC
AACACCACCCAACTTCGCTTCTACAACAACAACCAATTTACCGACGACCA
GCGCTGGCTCTCCGTCGTCGATGCCCCCTCTCAAGTCGTCCGCACAGGCC
GGAAACATGGTCCGGGACTGATCATTCTCGCACTAATCCCCATAATCTCC
TTCGCCCTCGGAACATGGCAAATTCAACGCCTAGAGTGGAAAACGAACCT
AATTGCCAAATTCGAAGACCGGCTAATCAAGCCCCCGCTGCCTCTACCCC
CGCGGGTCGACCCGTCCGCGATCTCCGAGTTCGATTACCGCCGTGTCGTC
GCGACGGGGACGCTGCGACATGATCAGGAGATGCTGGTGGGTCCGCGCAT
GCGGGAGGGCCAGGATGGGTTCTTTGTGGTGACGCCGCTGGAGCGCGAGG
GTGGGAGTACGGTGTTGGTGAATCGGGGGTGGATTAGTCGGAAGATGAAG
GAGAAGAGGGATAGATTGAGGCAGGGGGAAGGGAGGGCGCTGCCGGAGGG
AGAGGTCGTGGTGGAGGGATTGTTGAGGGAACCGTGGAAGAAGAATATGT
TTACGCCGGATAATGTGCCGGCTGAGGGAAAGTTTTATTTCCCTGATATT
GAGCAGATGGCGGAGTTGACGGGGAGTCAGCCCGTTTGGATTGAGGAGAC
TATGGTCCCCGATATGGTTGAGGCGATGGATCGCGAGGCCAAGGGTATTC
CTATTGGCCGTGCTGCTGAAGTCAACCTCAAGAACAACCACAGTCAGTAT
ATCTTTACTTGGTACGGCTTGTCGTTGGCAACCTCCATCATGCTGTGGAT
GATCATCCGCAAGCGTCCCAACGAGGCTACTCGGCGTGTGCGCCAGAACC
GGATGCGCTCCCTCCTCTCCGTCCTCTCCCGGACGGGCTCAAGAACCACT
CCCCTACGCCCCACATCCTCAATCCTGCGCACCGCTCTCAACAGAACAGG
AACAGCAGCAGGACCGGACTCCCTCTGCACGCGCTGCCTCCGCCGCACCA
ACAACACCACCCAACTTCGCTTCTACAACAACAACCAATTTACCGACGAC
CAGCGCTGGCTCTCCGTCGTCGATGCCCCCTCTCAAGTCGTCCGCACAGG
CCGGAAACATGGTCCGGGACTGATCATTCTCGCACTAATCCCCATAATCT
CCTTCGCCCTCGGAACATGGCAAATTCAACGCCTAGAGTGGAAAACGAAC
CTAATTGCCAAATTCGAAGACCGGCTAATCAAGCCCCCGCTGCCTCTACC
CCCGCGGGTCGACCCGTCCGCGATCTCCGAGTTCGATTACCGCCGTGTCG
TCGCGACGGGGACGCTGCGACATGATCAGGAGATGCTGGTGGGTCCGCGC
ATGCGGGAGGGCCAGGATGGGTTCTTTGTGGTGACGCCGCTGGAGCGCGA
GGGTGGGAGTACGGTGTTGGTGAATCGGGGGTGGATTAGTCGGAAGATGA
AGGAGAAGAGGGATAGATTGAGGCAGGGGGAAGGGAGGGCGCTGCCGGAG
GGAGAGGTCGTGGTGGAGGGATTGTTGAGGGAACCGTGGAAGAAGAATAT
GTTTACGCCGGATAATGTGCCGGCTGAGGGAAAGTTTTATTTCCCTGATA
TTGAGCAGATGGCGGAGTTGACGGGGAGTCAGCCCGTTTGGATTGAGGAG
ACTATGGTCCCCGATATGGTTGAGGCGATGGATCGCGAGGCCAAGGGTAT
TCCTATTGGCCGTGCTGCTGAAGTCAACCTCAAGAACAACCACAGTCAGT
ATATCTTTACTTGGTACGGCTTGTCGTTGGCAACCTCCATCATGCTGTGG
ATGATCATCCGCAAGCGTCCCAACGAGGCTACTCGGCGTGTGCGCCAGAA
CCGGATGCGCTCCCTCCTCTCCGTCCTCTCCCGGACGGGCTCAAGAACCA
CTCCCCTACGCCCCACATCCTCAATCCTGCGCACCGCTCTCAACAGAACA
GGAACAGCAGCAGGACCGGACTCCCTCTGCACGCGCTGCCTCCGCCGCAC
CAACAACACCACCCAACTTCGCTTCTACAACAACAACCAATTTACCGACG
ACCAGCGCTGGCTCTCCGTCGTCGATGCCCCCTCTCAAGTCGTCCGCACA
GGCCGGAAACATGGTCCGGGACTGATCATTCTCGCACTAATCCCCATAAT
CTCCTTCGCCCTCGGAACATGGCAAATTCAACGCCTAGAGTGGAAAACGA
ACCTAATTGCCAAATTCGAAGACCGGCTAATCAAGCCCCCGCTGCCTCTA
CCCCCGCGGGTCGACCCGTCCGCGATCTCCGAGTTCGATTACCGCCGTGT
CGTCGCGACGGGGACGCTGCGACATGATCAGGAGATGCTGGTGGGTCCGC
GCATGCGGGAGGGCCAGGATGGGTTCTTTGTGGTGACGCCGCTGGAGCGC
GAGGGTGGGAGTACGGTGTTGGTGAATCGGGGGTGGATTAGTCGGAAGAT
GAAGGAGAAGAGGGATAGATTGAGGCAGGGGGAAGGGAGGGCGCTGCCGG
AGGGAGAGGTCGTGGTGGAGGGATTGTTGAGGGAACCGTGGAAGAAGAAT
ATGTTTACGCCGGATAATGTGCCGGCTGAGGGAAAGTTTTATTTCCCTGA
TATTGAGCAGATGGCGGAGTTGACGGGGAGTCAGCCCGTTTGGATTGAGG
AGACTATGGTCCCCGATATGGTTGAGGCGATGGATCGCGAGGCCAAGGGT
ATTCCTATTGGCCGTGCTGCTGAAGTCAACCTCAAGAACAACCACAGTCA
GTATATCTTTACTTGGTACGGCTTGTCGTTGGCAACCTCCATCATGCTGT
GGATGATCATCCGCAAGCGTCCCAACGAGGCTACTCGGCGTGTGCGCCAG
AACCGGATGCGCTCCCTCCTCTCCGTCCTCTCCCGGACGGGCTCAAGAAC
CACTCCCCTACGCCCCACATCCTCAATCCTGCGCACCGCTCTCAACAGAA
CAGGAACAGCAGCAGGACCGGACTCCCTCTGCACGCGCTGCCTCCGCCGC
ACCAACAACACCACCCAACTTCGCTTCTACAACAACAACCAATTTACCGA
CGACCAGCGCTGGCTCTCCGTCGTCGATGCCCCCTCTCAAGTCGTCCGCA
CAGGCCGGAAACATGGTCCGGGACTGATCATTCTCGCACTAATCCCCATA
ATCTCCTTCGCCCTCGGAACATGGCAAATTCAACGCCTAGAGTGGAAAAC
GAACCTAATTGCCAAATTCGAAGACCGGCTAATCAAGCCCCCGCTGCCTC
TACCCCCGCGGGTCGACCCGTCCGCGATCTCCGAGTTCGATTACCGCCGT
GTCGTCGCGACGGGGACGCTGCGACATGATCAGGAGATGCTGGTGGGTCC
GCGCATGCGGGAGGGCCAGGATGGGTTCTTTGTGGTGACGCCGCTGGAGC
GCGAGGGTGGGAGTACGGTGTTGGTGAATCGGGGGTGGATTAGTCGGAAG
ATGAAGGAGAAGAGGGATAGATTGAGGCAGGGGGAAGGGAGGGCGCTGCC
GGAGGGAGAGGTCGTGGTGGAGGGATTGTTGAGGGAACCGTGGAAGAAGA
ATATGTTTACGCCGGATAATGTGCCGGCTGAGGGAAAGTTTTATTTCCCT
GATATTGAGCAGATGGCGGAGTTGACGGGGAGTCAGCCCGTTTGGATTGA
GGAGACTATGGTCCCCGATATGGTTGAGGCGATGGATCGCGAGGCCAAGG
GTATTCCTATTGGCCGTGCTGCTGAAGTCAACCTCAAGAACAACCACAGT
CAGTATATCTTTACTTGGTACGGCTTGTCGTTGGCAACCTCCATCATGCT
GTGGATGATCATCCGCAAGCGTCCCAACGAGGCTACTCGGCGTGTGCGCC
AGAACCGG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_178892ASPNIDRAFT_178892Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_178892-T1.exon1ASPNIDRAFT_178892-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_178892-T1.exon2ASPNIDRAFT_178892-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_178892-T1.exon3ASPNIDRAFT_178892-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_178892-T1.exon4ASPNIDRAFT_178892-T1.exon4Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_178892-T1.cdsASPNIDRAFT_178892-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_178892-T1ASPNIDRAFT_178892-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09263V60
DBxrefInterPro:IPR002994
DBxrefPFAM:PF02104
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000019.1supercontigACJE01000019.1:2465130..2466363 +
Powered by Drupal