You are here

Home

ASPNIDRAFT_54081-T1, ASPNIDRAFT_54081-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_54081-T1
Unique NameASPNIDRAFT_54081-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000020.1:168981..169863-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_54081-T1 ID=ASPNIDRAFT_54081-T1|Name=ASPNIDRAFT_54081-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=883bp|location=Sequence derived from alignment at ACJE01000020.1:168981..169863- (Aspergillus niger ATCC 1015)
GTGATTTGTACCGCACTTTCAGGTTTCTTGTCATTGACTCTCAAAAATCG
ATACTTCCACAAAGTAGCAGTCCTCTTAACACCATATAAAAGCACACCAT
GTCATCCCCGAATCCCGTCGATGCCCCGCAGCATGTCCTACAGCTCCTTT
CCGAACTTCACAAAAAGTCCTTGAAACAGGAAGCTCTGATTTCCAAGAAC
GGCAAGTTTATTTCCACGACTCTTCTCGGCAAGCTAGAAGACAAAGACGC
TGCCGCCAAGCAAGCCGAATTCGACCAAGTCATGCTCGACAAATTCATCG
CGCTGGACGAAGACAAATGCCAATTCACCTATCAGCTGATCAACGCCATG
GGTGCTACTAATGTCATCGAGGCAGGCACCAGCTTTGGGGTCAGCACCAT
CTACCTTGCTCTGGCTGTCGCGAAGACCACCGCCGCAACCGGCAAGTCTG
GCACTGTCATCGCAACGGAGAAGGAGAAATCGAAGGCGGATATTGCCCGT
GGTTACTGGCGTCAGTGTGGTGATCTTGTGGAGAAACAGATCGATCTGAG
AGAGGGTGATCTGCTTGAAACTTTGAAGGAAGGGCTGCCGGAAATTGATC
TTCTCCTTCTTGACAGTAAGTTTGTTGCCTTGTTGGCCGAGGACACCTAT
GTGGCTAACTGAGATCCATAGTCTGGACTCCTCTAGCACTTCCTACCCTT
AAAATCGTTCTCCCTCGGCTCCGACACGGTGCAGTGGTGCTTGCAGATAA
CACGATCTCCGGAGCTCAGGGCTACGCGGATCTGTTGTCTTTCTTGAGAT
CGCCTGAGAATGGCTTCCGCAATATGACGTTGCCTTTCACGAATGGATTT
GAGATGAGCGTTTACCTGCCGCAGGGGAAGTGA
back to top

Coding sequence (CDS) from alignment at ACJE01000020.1:168981..169863-

>ASPNIDRAFT_54081-T1 ID=ASPNIDRAFT_54081-T1|Name=ASPNIDRAFT_54081-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1458bp|location=Sequence derived from alignment at ACJE01000020.1:168981..169863- (Aspergillus niger ATCC 1015)
TCTGGACTCCTCTAGCACTTCCTACCCTTAAAATCGTTCTCCCTCGGCTC
CGACACGGTGCAGTGGTGCTTGCAGATAACACGATCTCCGGAGCTCAGGG
CTACGCGGATCTGTTGTCTTTCTTGAGATCGCCTGAGAATGGCTTCCGCA
ATATGACGTTGCCTTTCACGAATGGATTTGAGATGAGCGTTTACCTGCCG
CAGGGGAAGTGAATGTCATCCCCGAATCCCGTCGATGCCCCGCAGCATGT
CCTACAGCTCCTTTCCGAACTTCACAAAAAGTCCTTGAAACAGGAAGCTC
TGATTTCCAAGAACGGCAAGTTTATTTCCACGACTCTTCTCGGCAAGCTA
GAAGACAAAGACGCTGCCGCCAAGCAAGCCGAATTCGACCAAGTCATGCT
CGACAAATTCATCGCGCTGGACGAAGACAAATGCCAATTCACCTATCAGC
TGATCAACGCCATGGGTGCTACTAATGTCATCGAGGCAGGCACCAGCTTT
GGGGTCAGCACCATCTACCTTGCTCTGGCTGTCGCGAAGACCACCGCCGC
AACCGGCAAGTCTGGCACTGTCATCGCAACGGAGAAGGAGAAATCGAAGG
CGGATATTGCCCGTGGTTACTGGCGTCAGTGTGGTGATCTTGTGGAGAAA
CAGATCGATCTGAGAGAGGGTGATCTGCTTGAAACTTTGAAGGAAGGGCT
GCCGGAAATTGATCTTCTCCTTCTTGACATCTGGACTCCTCTAGCACTTC
CTACCCTTAAAATCGTTCTCCCTCGGCTCCGACACGGTGCAGTGGTGCTT
GCAGATAACACGATCTCCGGAGCTCAGGGCTACGCGGATCTGTTGTCTTT
CTTGAGATCGCCTGAGAATGGCTTCCGCAATATGACGTTGCCTTTCACGA
ATGGATTTGAGATGAGCGTTTACCTGCCGCAGGGGAAGTGAATGTCATCC
CCGAATCCCGTCGATGCCCCGCAGCATGTCCTACAGCTCCTTTCCGAACT
TCACAAAAAGTCCTTGAAACAGGAAGCTCTGATTTCCAAGAACGGCAAGT
TTATTTCCACGACTCTTCTCGGCAAGCTAGAAGACAAAGACGCTGCCGCC
AAGCAAGCCGAATTCGACCAAGTCATGCTCGACAAATTCATCGCGCTGGA
CGAAGACAAATGCCAATTCACCTATCAGCTGATCAACGCCATGGGTGCTA
CTAATGTCATCGAGGCAGGCACCAGCTTTGGGGTCAGCACCATCTACCTT
GCTCTGGCTGTCGCGAAGACCACCGCCGCAACCGGCAAGTCTGGCACTGT
CATCGCAACGGAGAAGGAGAAATCGAAGGCGGATATTGCCCGTGGTTACT
GGCGTCAGTGTGGTGATCTTGTGGAGAAACAGATCGATCTGAGAGAGGGT
GATCTGCTTGAAACTTTGAAGGAAGGGCTGCCGGAAATTGATCTTCTCCT
TCTTGACA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0008171O-methyltransferase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54081ASPNIDRAFT_54081Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54081-T1ASPNIDRAFT_54081-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54081-T1.cdsASPNIDRAFT_54081-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54081-T1.exon2ASPNIDRAFT_54081-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_54081-T1.exon1ASPNIDRAFT_54081-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54081-T1.utr5p1ASPNIDRAFT_54081-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR029063
DBxrefInterPro:IPR002935
DBxrefPFAM:PF01596
DBxrefPFAM:PF13578
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000020.1supercontigACJE01000020.1:168981..169863 -
Powered by Drupal