You are here

Home

ASPNIDRAFT_143698-T1, ASPNIDRAFT_143698-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_143698-T1
Unique NameASPNIDRAFT_143698-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000020.1:743427..743809-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_143698-T1 ID=ASPNIDRAFT_143698-T1|Name=ASPNIDRAFT_143698-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=383bp|location=Sequence derived from alignment at ACJE01000020.1:743427..743809- (Aspergillus niger ATCC 1015)
AACCCTCTCCTCCGCACCACAAACCCCCTCGTCAGCTCCCTCGAACAAGA
AGTCCTAGATGAATATACTCGTCTATTAGGGAATGTGAATAAGGTGCGTT
TCCCCCCAAACCCAAACCCCATCAACTCCCAATCCTCTCATCCACTTAAA
ATATATCCAATCCTACAAACACCCTTCAAGCACAGATGACGACCCACCAC
TCCTCTTCCCTGCAATACTAACAATATTTGAATATGGTATAGTTATCAAC
CAAACTCTCCACACTCGCCGAAAACCCCACAACCCTTACGCTCGACGGGC
TCCGCGGCCTGGAACGCCAAACCGCGACGGTCTGCACGCTGCTCAAGGCG
AGCGTGTATAGTATTGTTCTCCAACAGCAGATT
back to top

Coding sequence (CDS) from alignment at ACJE01000020.1:743427..743809-

>ASPNIDRAFT_143698-T1 ID=ASPNIDRAFT_143698-T1|Name=ASPNIDRAFT_143698-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=468bp|location=Sequence derived from alignment at ACJE01000020.1:743427..743809- (Aspergillus niger ATCC 1015)
TTATCAACCAAACTCTCCACACTCGCCGAAAACCCCACAACCCTTACGCT
CGACGGGCTCCGCGGCCTGGAACGCCAAACCGCGACGGTCTGCACGCTGC
TCAAGGCGAGCGTGTATAGTATTGTTCTCCAACAGCAGATTAACCCTCTC
CTCCGCACCACAAACCCCCTCGTCAGCTCCCTCGAACAAGAAGTCCTAGA
TGAATATACTCGTCTATTAGGGAATGTGAATAAGTTATCAACCAAACTCT
CCACACTCGCCGAAAACCCCACAACCCTTACGCTCGACGGGCTCCGCGGC
CTGGAACGCCAAACCGCGACGGTCTGCACGCTGCTCAAGGCGAGCGTGTA
TAGTATTGTTCTCCAACAGCAGATTAACCCTCTCCTCCGCACCACAAACC
CCCTCGTCAGCTCCCTCGAACAAGAAGTCCTAGATGAATATACTCGTCTA
TTAGGGAATGTGAATAAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0072686mitotic spindle
GO:0042729DASH complex
Vocabulary: Biological Process
TermDefinition
GO:0008608attachment of spindle microtubules to kinetochore
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_143698ASPNIDRAFT_143698Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_143698-T1ASPNIDRAFT_143698-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_143698-T1.cdsASPNIDRAFT_143698-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_143698-T1.exon2ASPNIDRAFT_143698-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_143698-T1.exon1ASPNIDRAFT_143698-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteBUSCO:EOG09265RGI
DBxrefInterPro:IPR013965
DBxrefPFAM:PF08656
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000020.1supercontigACJE01000020.1:743427..743809 -
Powered by Drupal