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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000020.1:1079276..1079981- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_187803-T1 ID=ASPNIDRAFT_187803-T1|Name=ASPNIDRAFT_187803-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=706bp|location=Sequence derived from alignment at ACJE01000020.1:1079276..1079981- (Aspergillus niger ATCC 1015)
ATGTTTCCCACGCGAGCTCTCTTCTCCCGCTCGGTCTGGAAGGGTGAGAA
TACCCCATCGAAGTCCCTATTTTAAATCACTGGAGAAATTGAATCCATCT
AACCTGCATACCTACAGGCCCGAACATCGTCCCGTACGTCGTCGCATTTA
TTCCCTTTCCTTCCCTACCTTTCACGAAAGGCACATCACTACCCAATCCC
TATACAATACCGCCACATATCAATTGCAACCGCTACTCGACACATTCTCT
ACTGGAAACTGGAAATAAAATACTAATAAAAGCTATGATAGTCTCCCTCT
CCCCCGCAAACTCCCCGCTCCGCCAGGAACACCACCGATCAAGACGCAGA
AGCGCGGCGCCACGATCCTGCCTAACTTCGTGGGATTGAAGTTCCAGGTC
CACAATGGGAAGATTTATCAGGATGTTGTGATCACGGAGGAGATGGTCGG
CAGGAAGTTGGGGGAGTTTGTTGCGTGAGTTTTTTCTCTATCCAACTCTC
TTCTTTTTTTTTCTTTTTCGCCTGGGGGGTTTGGAGTGGGATATAGGAAA
TGTGGTGAACTTGGAGGATTTGAAGGTTGAAAGGAAAGAGGGAATATTTG
GTGGAATGGGATATTGATTGGTGTATGATGATGGACTTTCTGCTAACTGA
TTGGTTTTGGTAGGACTCGGAAGAGGTTCACGTATAAGCAGTCGAAGAAC
AAATGA back to topCoding sequence (CDS) from alignment at ACJE01000020.1:1079276..1079981- >ASPNIDRAFT_187803-T1 ID=ASPNIDRAFT_187803-T1|Name=ASPNIDRAFT_187803-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=864bp|location=Sequence derived from alignment at ACJE01000020.1:1079276..1079981- (Aspergillus niger ATCC 1015)
GACTCGGAAGAGGTTCACGTATAAGCAGTCGAAGAACAAATGATCTCCCT
CTCCCCCGCAAACTCCCCGCTCCGCCAGGAACACCACCGATCAAGACGCA
GAAGCGCGGCGCCACGATCCTGCCTAACTTCGTGGGATTGAAGTTCCAGG
TCCACAATGGGAAGATTTATCAGGATGTTGTGATCACGGAGGAGATGGTC
GGCAGGAAGTTGGGGGAGTTTGTTGCATGTTTCCCACGCGAGCTCTCTTC
TCCCGCTCGGTCTGGAAGGGTGAGAATACCCCATCGAAGACTCGGAAGAG
GTTCACGTATAAGCAGTCGAAGAACAAATGATCTCCCTCTCCCCCGCAAA
CTCCCCGCTCCGCCAGGAACACCACCGATCAAGACGCAGAAGCGCGGCGC
CACGATCCTGCCTAACTTCGTGGGATTGAAGTTCCAGGTCCACAATGGGA
AGATTTATCAGGATGTTGTGATCACGGAGGAGATGGTCGGCAGGAAGTTG
GGGGAGTTTGTTGCATGTTTCCCACGCGAGCTCTCTTCTCCCGCTCGGTC
TGGAAGGGTGAGAATACCCCATCGAAGACTCGGAAGAGGTTCACGTATAA
GCAGTCGAAGAACAAATGATCTCCCTCTCCCCCGCAAACTCCCCGCTCCG
CCAGGAACACCACCGATCAAGACGCAGAAGCGCGGCGCCACGATCCTGCC
TAACTTCGTGGGATTGAAGTTCCAGGTCCACAATGGGAAGATTTATCAGG
ATGTTGTGATCACGGAGGAGATGGTCGGCAGGAAGTTGGGGGAGTTTGTT
GCATGTTTCCCACGCGAGCTCTCTTCTCCCGCTCGGTCTGGAAGGGTGAG
AATACCCCATCGAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005840 | ribosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003723 | RNA binding |
| GO:0003735 | structural constituent of ribosome |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR020934 |
| DBxref | InterPro:IPR023575 |
| DBxref | InterPro:IPR002222 |
| DBxref | PFAM:PF00203 |
| Product | mitochondrial ribosomal small subunit component |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000020.1 | supercontig | ACJE01000020.1:1079276..1079981 - |
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