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ASPNIDRAFT_42907-T1, ASPNIDRAFT_42907-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_42907-T1
Unique NameASPNIDRAFT_42907-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000020.1:1112461..1114033-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_42907-T1 ID=ASPNIDRAFT_42907-T1|Name=ASPNIDRAFT_42907-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1573bp|location=Sequence derived from alignment at ACJE01000020.1:1112461..1114033- (Aspergillus niger ATCC 1015)
ATGGCGTACGGCAGCCGAATGAGCCAGCAATTCCATGGCTCCCAGCAACA
CCACAATAGAGGTCGCAAGAAGGAGGATGAGAATGATGCTCTTATGCGCC
TGGTTAGTTCGCAGTTGAACAAGGCCTCTTCGCTTACAATATCTAACGCT
GCTATTAGCCGGACAAGGAAATCGCAGGATGCATTAATGACATAGGCATC
CCCTTCACCGCCGCCGACTTGATCAAGCCAAACCCGCAACAGATTCAAAT
GGTCTTTGAATGGTTTGCCGAGCTCCTTATGAATATGACACGCGAAACCG
TCGAGCCAGCGATGCGAGCGGCGGCGGACGATATCTGTGGCGACTACCCC
GACATTGTACCTACCGACACGCGCAACCTCATGGGGTTCTTTACCAGCTT
ACGGCGGTTGATGATGGAGGTGCGTATAAACCCGCTTCTTATTTGAAACA
GATGAGCTCAGTCGGACCTAACACGGCATATGGAAACATAGTGTGGTGTC
AATGATTTTATGTTTACCGATCTCACCAAGCCAACGCATGATCGACTCGT
TAAGATATTCTCCTACCTCATCAACTTTGTCAGATTCCGCGAATCTCAAA
CGCCCGTTATTGATGAGCATTTCAACAAGGGCGAGAAGGTCAAGTCGCGC
ATTGACACCCTGTACACGGAGAACCAGGAGATGGAGCAGCGCCTCGAGGA
AATGCGCCGGACTCTGAAGGCCAACGAGGCACAGGTTAAGGAGAAGGTAC
GACGGAATGACGAGTTGAAAGCACGGCTACTCGAATTGCGACGAAACCAA
GAGCGAGTGGCCGAGATGCTAGAAAGAGCCAAGGCGGATAAGGCAAGACG
GCAAGCGCAGCTTGAGGAGAAGACGGAAAAGGTCGTTCGTACGCGACAAG
AAGTCGAGAAACTGCGTCCCTATGTTATGGAGAGCCCCATCTCTCTCCAG
TCGTCGCTGAGTGAATTGTCGGAAAATCTCCTTCGTGAGAAAGCGCAAAT
CGACGCGATGGAGAAACGAGCGAGAGCTCTGCAAACATCATCGGACACGT
TTACGGTCGTTAGTAACGACGTGCAAGCTTGTGTGCGCCTTCTCGAAGAT
ATATCCGTGGAACTGCAAAAGGAAGATGATGAAGAGTCAAGGGCCTCTAG
GAATAGAGAAGCCATTTCAGAGCGGGGGAATAATGTCAGGGAAGTGGAGC
AGACCGAGAAGTTGCTGCAGCGGCAGCTGGCACGATGGAATGAGAGGATC
GAGGCTTTACGGAAAAATGCTCAAGAAAAAGCCGAAGTAGCGCAGGCGCG
CATGGAGGAACTCCGGGAAGTTCAGAAACAACTCCGGGAGGAGCGAGCTG
AAAAGCAACGCGACATGGAGCGGAGGAGAATCCGGATCGAACAAACTGAG
AAGAAGGTAAATGTCTCTTGTTTCCTTCGGCTTTGCATGCTTTACTAATT
TCCATCCAGATGGCCGATCTCAAGGAGAACATTGAGAGCGAAATCCAAAG
CGCTCACGATGAGTACTTGAAGTTGGAGTCACACATCAAACTCTATATCA
CGGACATGGAGAAATGCCTATAA
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Coding sequence (CDS) from alignment at ACJE01000020.1:1112461..1114033-

>ASPNIDRAFT_42907-T1 ID=ASPNIDRAFT_42907-T1|Name=ASPNIDRAFT_42907-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=5568bp|location=Sequence derived from alignment at ACJE01000020.1:1112461..1114033- (Aspergillus niger ATCC 1015)
ATGGCCGATCTCAAGGAGAACATTGAGAGCGAAATCCAAAGCGCTCACGA
TGAGTACTTGAAGTTGGAGTCACACATCAAACTCTATATCACGGACATGG
AGAAATGCCTATAATGTGGTGTCAATGATTTTATGTTTACCGATCTCACC
AAGCCAACGCATGATCGACTCGTTAAGATATTCTCCTACCTCATCAACTT
TGTCAGATTCCGCGAATCTCAAACGCCCGTTATTGATGAGCATTTCAACA
AGGGCGAGAAGGTCAAGTCGCGCATTGACACCCTGTACACGGAGAACCAG
GAGATGGAGCAGCGCCTCGAGGAAATGCGCCGGACTCTGAAGGCCAACGA
GGCACAGGTTAAGGAGAAGGTACGACGGAATGACGAGTTGAAAGCACGGC
TACTCGAATTGCGACGAAACCAAGAGCGAGTGGCCGAGATGCTAGAAAGA
GCCAAGGCGGATAAGGCAAGACGGCAAGCGCAGCTTGAGGAGAAGACGGA
AAAGGTCGTTCGTACGCGACAAGAAGTCGAGAAACTGCGTCCCTATGTTA
TGGAGAGCCCCATCTCTCTCCAGTCGTCGCTGAGTGAATTGTCGGAAAAT
CTCCTTCGTGAGAAAGCGCAAATCGACGCGATGGAGAAACGAGCGAGAGC
TCTGCAAACATCATCGGACACGTTTACGGTCGTTAGTAACGACGTGCAAG
CTTGTGTGCGCCTTCTCGAAGATATATCCGTGGAACTGCAAAAGGAAGAT
GATGAAGAGTCAAGGGCCTCTAGGAATAGAGAAGCCATTTCAGAGCGGGG
GAATAATGTCAGGGAAGTGGAGCAGACCGAGAAGTTGCTGCAGCGGCAGC
TGGCACGATGGAATGAGAGGATCGAGGCTTTACGGAAAAATGCTCAAGAA
AAAGCCGAAGTAGCGCAGGCGCGCATGGAGGAACTCCGGGAAGTTCAGAA
ACAACTCCGGGAGGAGCGAGCTGAAAAGCAACGCGACATGGAGCGGAGGA
GAATCCGGATCGAACAAACTGAGAAGAAGCCGGACAAGGAAATCGCAGGA
TGCATTAATGACATAGGCATCCCCTTCACCGCCGCCGACTTGATCAAGCC
AAACCCGCAACAGATTCAAATGGTCTTTGAATGGTTTGCCGAGCTCCTTA
TGAATATGACACGCGAAACCGTCGAGCCAGCGATGCGAGCGGCGGCGGAC
GATATCTGTGGCGACTACCCCGACATTGTACCTACCGACACGCGCAACCT
CATGGGGTTCTTTACCAGCTTACGGCGGTTGATGATGGAGATGGCGTACG
GCAGCCGAATGAGCCAGCAATTCCATGGCTCCCAGCAACACCACAATAGA
GGTCGCAAGAAGGAGGATGAGAATGATGCTCTTATGCGCCTGATGGCCGA
TCTCAAGGAGAACATTGAGAGCGAAATCCAAAGCGCTCACGATGAGTACT
TGAAGTTGGAGTCACACATCAAACTCTATATCACGGACATGGAGAAATGC
CTATAATGTGGTGTCAATGATTTTATGTTTACCGATCTCACCAAGCCAAC
GCATGATCGACTCGTTAAGATATTCTCCTACCTCATCAACTTTGTCAGAT
TCCGCGAATCTCAAACGCCCGTTATTGATGAGCATTTCAACAAGGGCGAG
AAGGTCAAGTCGCGCATTGACACCCTGTACACGGAGAACCAGGAGATGGA
GCAGCGCCTCGAGGAAATGCGCCGGACTCTGAAGGCCAACGAGGCACAGG
TTAAGGAGAAGGTACGACGGAATGACGAGTTGAAAGCACGGCTACTCGAA
TTGCGACGAAACCAAGAGCGAGTGGCCGAGATGCTAGAAAGAGCCAAGGC
GGATAAGGCAAGACGGCAAGCGCAGCTTGAGGAGAAGACGGAAAAGGTCG
TTCGTACGCGACAAGAAGTCGAGAAACTGCGTCCCTATGTTATGGAGAGC
CCCATCTCTCTCCAGTCGTCGCTGAGTGAATTGTCGGAAAATCTCCTTCG
TGAGAAAGCGCAAATCGACGCGATGGAGAAACGAGCGAGAGCTCTGCAAA
CATCATCGGACACGTTTACGGTCGTTAGTAACGACGTGCAAGCTTGTGTG
CGCCTTCTCGAAGATATATCCGTGGAACTGCAAAAGGAAGATGATGAAGA
GTCAAGGGCCTCTAGGAATAGAGAAGCCATTTCAGAGCGGGGGAATAATG
TCAGGGAAGTGGAGCAGACCGAGAAGTTGCTGCAGCGGCAGCTGGCACGA
TGGAATGAGAGGATCGAGGCTTTACGGAAAAATGCTCAAGAAAAAGCCGA
AGTAGCGCAGGCGCGCATGGAGGAACTCCGGGAAGTTCAGAAACAACTCC
GGGAGGAGCGAGCTGAAAAGCAACGCGACATGGAGCGGAGGAGAATCCGG
ATCGAACAAACTGAGAAGAAGCCGGACAAGGAAATCGCAGGATGCATTAA
TGACATAGGCATCCCCTTCACCGCCGCCGACTTGATCAAGCCAAACCCGC
AACAGATTCAAATGGTCTTTGAATGGTTTGCCGAGCTCCTTATGAATATG
ACACGCGAAACCGTCGAGCCAGCGATGCGAGCGGCGGCGGACGATATCTG
TGGCGACTACCCCGACATTGTACCTACCGACACGCGCAACCTCATGGGGT
TCTTTACCAGCTTACGGCGGTTGATGATGGAGATGGCGTACGGCAGCCGA
ATGAGCCAGCAATTCCATGGCTCCCAGCAACACCACAATAGAGGTCGCAA
GAAGGAGGATGAGAATGATGCTCTTATGCGCCTGATGGCCGATCTCAAGG
AGAACATTGAGAGCGAAATCCAAAGCGCTCACGATGAGTACTTGAAGTTG
GAGTCACACATCAAACTCTATATCACGGACATGGAGAAATGCCTATAATG
TGGTGTCAATGATTTTATGTTTACCGATCTCACCAAGCCAACGCATGATC
GACTCGTTAAGATATTCTCCTACCTCATCAACTTTGTCAGATTCCGCGAA
TCTCAAACGCCCGTTATTGATGAGCATTTCAACAAGGGCGAGAAGGTCAA
GTCGCGCATTGACACCCTGTACACGGAGAACCAGGAGATGGAGCAGCGCC
TCGAGGAAATGCGCCGGACTCTGAAGGCCAACGAGGCACAGGTTAAGGAG
AAGGTACGACGGAATGACGAGTTGAAAGCACGGCTACTCGAATTGCGACG
AAACCAAGAGCGAGTGGCCGAGATGCTAGAAAGAGCCAAGGCGGATAAGG
CAAGACGGCAAGCGCAGCTTGAGGAGAAGACGGAAAAGGTCGTTCGTACG
CGACAAGAAGTCGAGAAACTGCGTCCCTATGTTATGGAGAGCCCCATCTC
TCTCCAGTCGTCGCTGAGTGAATTGTCGGAAAATCTCCTTCGTGAGAAAG
CGCAAATCGACGCGATGGAGAAACGAGCGAGAGCTCTGCAAACATCATCG
GACACGTTTACGGTCGTTAGTAACGACGTGCAAGCTTGTGTGCGCCTTCT
CGAAGATATATCCGTGGAACTGCAAAAGGAAGATGATGAAGAGTCAAGGG
CCTCTAGGAATAGAGAAGCCATTTCAGAGCGGGGGAATAATGTCAGGGAA
GTGGAGCAGACCGAGAAGTTGCTGCAGCGGCAGCTGGCACGATGGAATGA
GAGGATCGAGGCTTTACGGAAAAATGCTCAAGAAAAAGCCGAAGTAGCGC
AGGCGCGCATGGAGGAACTCCGGGAAGTTCAGAAACAACTCCGGGAGGAG
CGAGCTGAAAAGCAACGCGACATGGAGCGGAGGAGAATCCGGATCGAACA
AACTGAGAAGAAGCCGGACAAGGAAATCGCAGGATGCATTAATGACATAG
GCATCCCCTTCACCGCCGCCGACTTGATCAAGCCAAACCCGCAACAGATT
CAAATGGTCTTTGAATGGTTTGCCGAGCTCCTTATGAATATGACACGCGA
AACCGTCGAGCCAGCGATGCGAGCGGCGGCGGACGATATCTGTGGCGACT
ACCCCGACATTGTACCTACCGACACGCGCAACCTCATGGGGTTCTTTACC
AGCTTACGGCGGTTGATGATGGAGATGGCGTACGGCAGCCGAATGAGCCA
GCAATTCCATGGCTCCCAGCAACACCACAATAGAGGTCGCAAGAAGGAGG
ATGAGAATGATGCTCTTATGCGCCTGATGGCCGATCTCAAGGAGAACATT
GAGAGCGAAATCCAAAGCGCTCACGATGAGTACTTGAAGTTGGAGTCACA
CATCAAACTCTATATCACGGACATGGAGAAATGCCTATAATGTGGTGTCA
ATGATTTTATGTTTACCGATCTCACCAAGCCAACGCATGATCGACTCGTT
AAGATATTCTCCTACCTCATCAACTTTGTCAGATTCCGCGAATCTCAAAC
GCCCGTTATTGATGAGCATTTCAACAAGGGCGAGAAGGTCAAGTCGCGCA
TTGACACCCTGTACACGGAGAACCAGGAGATGGAGCAGCGCCTCGAGGAA
ATGCGCCGGACTCTGAAGGCCAACGAGGCACAGGTTAAGGAGAAGGTACG
ACGGAATGACGAGTTGAAAGCACGGCTACTCGAATTGCGACGAAACCAAG
AGCGAGTGGCCGAGATGCTAGAAAGAGCCAAGGCGGATAAGGCAAGACGG
CAAGCGCAGCTTGAGGAGAAGACGGAAAAGGTCGTTCGTACGCGACAAGA
AGTCGAGAAACTGCGTCCCTATGTTATGGAGAGCCCCATCTCTCTCCAGT
CGTCGCTGAGTGAATTGTCGGAAAATCTCCTTCGTGAGAAAGCGCAAATC
GACGCGATGGAGAAACGAGCGAGAGCTCTGCAAACATCATCGGACACGTT
TACGGTCGTTAGTAACGACGTGCAAGCTTGTGTGCGCCTTCTCGAAGATA
TATCCGTGGAACTGCAAAAGGAAGATGATGAAGAGTCAAGGGCCTCTAGG
AATAGAGAAGCCATTTCAGAGCGGGGGAATAATGTCAGGGAAGTGGAGCA
GACCGAGAAGTTGCTGCAGCGGCAGCTGGCACGATGGAATGAGAGGATCG
AGGCTTTACGGAAAAATGCTCAAGAAAAAGCCGAAGTAGCGCAGGCGCGC
ATGGAGGAACTCCGGGAAGTTCAGAAACAACTCCGGGAGGAGCGAGCTGA
AAAGCAACGCGACATGGAGCGGAGGAGAATCCGGATCGAACAAACTGAGA
AGAAGCCGGACAAGGAAATCGCAGGATGCATTAATGACATAGGCATCCCC
TTCACCGCCGCCGACTTGATCAAGCCAAACCCGCAACAGATTCAAATGGT
CTTTGAATGGTTTGCCGAGCTCCTTATGAATATGACACGCGAAACCGTCG
AGCCAGCGATGCGAGCGGCGGCGGACGATATCTGTGGCGACTACCCCGAC
ATTGTACCTACCGACACGCGCAACCTCATGGGGTTCTTTACCAGCTTACG
GCGGTTGATGATGGAGATGGCGTACGGCAGCCGAATGAGCCAGCAATTCC
ATGGCTCCCAGCAACACCACAATAGAGGTCGCAAGAAGGAGGATGAGAAT
GATGCTCTTATGCGCCTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0000776kinetochore
GO:0031262Ndc80 complex
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NUF2ASPNIDRAFT_42907Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_42907-T1ASPNIDRAFT_42907-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_42907-T1.cdsASPNIDRAFT_42907-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_42907-T1.exon4ASPNIDRAFT_42907-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_42907-T1.exon3ASPNIDRAFT_42907-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_42907-T1.exon2ASPNIDRAFT_42907-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_42907-T1.exon1ASPNIDRAFT_42907-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
DBxrefInterPro:IPR038275
DBxrefInterPro:IPR005549
DBxrefInterPro:IPR041112
DBxrefPFAM:PF03800
DBxrefPFAM:PF18595
Productkinetochore-associated Ndc80 complex subunit nuf2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000020.1supercontigACJE01000020.1:1112461..1114033 -
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