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ASPNIDRAFT_54204-T1, ASPNIDRAFT_54204-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_54204-T1
Unique NameASPNIDRAFT_54204-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000020.1:1204803..1206387+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_54204-T1 ID=ASPNIDRAFT_54204-T1|Name=ASPNIDRAFT_54204-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1585bp|location=Sequence derived from alignment at ACJE01000020.1:1204803..1206387+ (Aspergillus niger ATCC 1015)
CCAGATAATTCCATTTCTACACGATAAAAATGCCTGGAGTCAAGAAGCGC
AAGGTCGCCCGTGAGGCACCTGCGCCTGCGCCCGCACAAGAGAGCGATGT
CGAATCTTCCACCCCAGAGCAAACGCAAGAACCAGAAGCACAAGAGCAAG
AACAAGAAGAGGGACAGTCCAAGACATTCAAGGAACTAGGAATCATCGAA
CAGCTATGCGAGGCTTGCGAGACCATGGGCTACAAAGCACCTACACCTAT
TCAGCGGGAGTCGATTCCTCTGGCTCTTCAAGGCCGTGATTTGATCGGTC
TTGCAGAGACCGGAAGTGGAAAGACGGCAGCGTTTGCTCTTCCCATCCTC
CAAGGTACGTTTCCAGCTACAACAATCTTGTATCGCCTTTTATCGGCGCT
CCCAAATATGACTAGATCAAATAACTAACATCACCCCACAGCCTTGATGG
AAAAGCCCCAACCCTTCTTCGGCCTCGTCCTCGCCCCAACCCGAGAACTC
GCCTACCAGATCTCCAAATCTTTCGAGTCCCTAGGCGCCAGCATGGGTGT
GCGAAGCTGCGTCATCGTCGGTGGCATGGACATGGTCTCTCAGTCAATTT
CCCTCGGCAAAAAGCCCCATATCATCGTGGCCACCCCTGGTCGTCTTCTG
GACCACCTCGAGAACACCAAGGGCTTCTCCCTCCGCAACCTGAAGTACCT
GGTGATGGACGAAGCGGATCGACTTCTTGACATGGACTTCGGACCCCTCC
TCGACAAGATCCTGAAAGTCCTGCCCCGTGAGCGCCGCACATTCCTCTTC
TCTGCGACGATGAGCTCAAAGGTCGAATCCCTCCAACGTGCCTCCCTCTC
CAATCCGCTCCGTGTCTCTGTCTCCACAAGCAAATACCAGACCGTCTCGA
CTCTCCTCCAATCTTACCTCTTCATTCCCCAGAAGCACAAGGACCTGTAC
CTTGTCTACCTGTTGAACGAATTCGCCGGCCAGAGTACTATCATCTTCAC
GAGGACGGTGAACGAGACGCAGAGACTTGCGTTCTTGCTTCGTGCGCTTG
GCTTCGGCGCTATCCCGCTGCATGGACAGCTTTCACAGTCTGCTCGTCTC
GGTGCGCTGGGCAAGTTCCGTGCTCGTAGTCGGAATATTCTTGTCGCGAC
GGATGTGGCTGCTCGTGGTTTGGATATTCCGTCCGTTGATGTTGTGCTTA
ACTTTGATTTGCCGGGTGGTATGTATACCCGGTCTTCTGCTATGGGAGTA
TTATTGGAGTCGGCTAATGTTTTTATGTATTAGATTCTCCCAGCTATGTC
CACCGTGTCGGACGTACTGCCCGTGCTGGAAAGAGTGGTCTTGCTATCAG
CTTTGTCGCCCAGTACGATGTTGAGGTTTGGCTGAGGATCGAAGGTGCTT
TGGGCAAGAAGCTCAAGGAATACGACTGCCCTAAGGATGAGGTCATGGTG
CTTGGTGAGAATGTCGCGGAGGCGCAACGGCAGGCGATTATGGATATGAA
GGATTACAATGAGAAGAAGGGAAGCAGGGGCAAGAAGTTCGGTGGGAAGC
GTTCCCGGGATGAGATGGATCAAGAGGAGGGTTAG
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Coding sequence (CDS) from alignment at ACJE01000020.1:1204803..1206387+

>ASPNIDRAFT_54204-T1 ID=ASPNIDRAFT_54204-T1|Name=ASPNIDRAFT_54204-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=4212bp|location=Sequence derived from alignment at ACJE01000020.1:1204803..1206387+ (Aspergillus niger ATCC 1015)
ATGCCTGGAGTCAAGAAGCGCAAGGTCGCCCGTGAGGCACCTGCGCCTGC
GCCCGCACAAGAGAGCGATGTCGAATCTTCCACCCCAGAGCAAACGCAAG
AACCAGAAGCACAAGAGCAAGAACAAGAAGAGGGACAGTCCAAGACATTC
AAGGAACTAGGAATCATCGAACAGCTATGCGAGGCTTGCGAGACCATGGG
CTACAAAGCACCTACACCTATTCAGCGGGAGTCGATTCCTCTGGCTCTTC
AAGGCCGTGATTTGATCGGTCTTGCAGAGACCGGAAGTGGAAAGACGGCA
GCGTTTGCTCTTCCCATCCTCCAAGCCTTGATGGAAAAGCCCCAACCCTT
CTTCGGCCTCGTCCTCGCCCCAACCCGAGAACTCGCCTACCAGATCTCCA
AATCTTTCGAGTCCCTAGGCGCCAGCATGGGTGTGCGAAGCTGCGTCATC
GTCGGTGGCATGGACATGGTCTCTCAGTCAATTTCCCTCGGCAAAAAGCC
CCATATCATCGTGGCCACCCCTGGTCGTCTTCTGGACCACCTCGAGAACA
CCAAGGGCTTCTCCCTCCGCAACCTGAAGTACCTGGTGATGGACGAAGCG
GATCGACTTCTTGACATGGACTTCGGACCCCTCCTCGACAAGATCCTGAA
AGTCCTGCCCCGTGAGCGCCGCACATTCCTCTTCTCTGCGACGATGAGCT
CAAAGGTCGAATCCCTCCAACGTGCCTCCCTCTCCAATCCGCTCCGTGTC
TCTGTCTCCACAAGCAAATACCAGACCGTCTCGACTCTCCTCCAATCTTA
CCTCTTCATTCCCCAGAAGCACAAGGACCTGTACCTTGTCTACCTGTTGA
ACGAATTCGCCGGCCAGAGTACTATCATCTTCACGAGGACGGTGAACGAG
ACGCAGAGACTTGCGTTCTTGCTTCGTGCGCTTGGCTTCGGCGCTATCCC
GCTGCATGGACAGCTTTCACAGTCTGCTCGTCTCGGTGCGCTGGGCAAGT
TCCGTGCTCGTAGTCGGAATATTCTTGTCGCGACGGATGTGGCTGCTCGT
GGTTTGGATATTCCGTCCGTTGATGTTGTGCTTAACTTTGATTTGCCGGG
TGATTCTCCCAGCTATGTCCACCGTGTCGGACGTACTGCCCGTGCTGGAA
AGAGTGGTCTTGCTATCAGCTTTGTCGCCCAGTACGATGTTGAGGTTTGG
CTGAGGATCGAAGGTGCTTTGGGCAAGAAGCTCAAGGAATACGACTGCCC
TAAGGATGAGGTCATGGTGCTTGGTGAGAATGTCGCGGAGGCGCAACGGC
AGGCGATTATGGATATGAAGGATTACAATGAGAAGAAGGGAAGCAGGGGC
AAGAAGTTCGGTGGGAAGCGTTCCCGGGATGAGATGGATCAAGAGGAGGG
TTAGATGCCTGGAGTCAAGAAGCGCAAGGTCGCCCGTGAGGCACCTGCGC
CTGCGCCCGCACAAGAGAGCGATGTCGAATCTTCCACCCCAGAGCAAACG
CAAGAACCAGAAGCACAAGAGCAAGAACAAGAAGAGGGACAGTCCAAGAC
ATTCAAGGAACTAGGAATCATCGAACAGCTATGCGAGGCTTGCGAGACCA
TGGGCTACAAAGCACCTACACCTATTCAGCGGGAGTCGATTCCTCTGGCT
CTTCAAGGCCGTGATTTGATCGGTCTTGCAGAGACCGGAAGTGGAAAGAC
GGCAGCGTTTGCTCTTCCCATCCTCCAAGCCTTGATGGAAAAGCCCCAAC
CCTTCTTCGGCCTCGTCCTCGCCCCAACCCGAGAACTCGCCTACCAGATC
TCCAAATCTTTCGAGTCCCTAGGCGCCAGCATGGGTGTGCGAAGCTGCGT
CATCGTCGGTGGCATGGACATGGTCTCTCAGTCAATTTCCCTCGGCAAAA
AGCCCCATATCATCGTGGCCACCCCTGGTCGTCTTCTGGACCACCTCGAG
AACACCAAGGGCTTCTCCCTCCGCAACCTGAAGTACCTGGTGATGGACGA
AGCGGATCGACTTCTTGACATGGACTTCGGACCCCTCCTCGACAAGATCC
TGAAAGTCCTGCCCCGTGAGCGCCGCACATTCCTCTTCTCTGCGACGATG
AGCTCAAAGGTCGAATCCCTCCAACGTGCCTCCCTCTCCAATCCGCTCCG
TGTCTCTGTCTCCACAAGCAAATACCAGACCGTCTCGACTCTCCTCCAAT
CTTACCTCTTCATTCCCCAGAAGCACAAGGACCTGTACCTTGTCTACCTG
TTGAACGAATTCGCCGGCCAGAGTACTATCATCTTCACGAGGACGGTGAA
CGAGACGCAGAGACTTGCGTTCTTGCTTCGTGCGCTTGGCTTCGGCGCTA
TCCCGCTGCATGGACAGCTTTCACAGTCTGCTCGTCTCGGTGCGCTGGGC
AAGTTCCGTGCTCGTAGTCGGAATATTCTTGTCGCGACGGATGTGGCTGC
TCGTGGTTTGGATATTCCGTCCGTTGATGTTGTGCTTAACTTTGATTTGC
CGGGTGATTCTCCCAGCTATGTCCACCGTGTCGGACGTACTGCCCGTGCT
GGAAAGAGTGGTCTTGCTATCAGCTTTGTCGCCCAGTACGATGTTGAGGT
TTGGCTGAGGATCGAAGGTGCTTTGGGCAAGAAGCTCAAGGAATACGACT
GCCCTAAGGATGAGGTCATGGTGCTTGGTGAGAATGTCGCGGAGGCGCAA
CGGCAGGCGATTATGGATATGAAGGATTACAATGAGAAGAAGGGAAGCAG
GGGCAAGAAGTTCGGTGGGAAGCGTTCCCGGGATGAGATGGATCAAGAGG
AGGGTTAGATGCCTGGAGTCAAGAAGCGCAAGGTCGCCCGTGAGGCACCT
GCGCCTGCGCCCGCACAAGAGAGCGATGTCGAATCTTCCACCCCAGAGCA
AACGCAAGAACCAGAAGCACAAGAGCAAGAACAAGAAGAGGGACAGTCCA
AGACATTCAAGGAACTAGGAATCATCGAACAGCTATGCGAGGCTTGCGAG
ACCATGGGCTACAAAGCACCTACACCTATTCAGCGGGAGTCGATTCCTCT
GGCTCTTCAAGGCCGTGATTTGATCGGTCTTGCAGAGACCGGAAGTGGAA
AGACGGCAGCGTTTGCTCTTCCCATCCTCCAAGCCTTGATGGAAAAGCCC
CAACCCTTCTTCGGCCTCGTCCTCGCCCCAACCCGAGAACTCGCCTACCA
GATCTCCAAATCTTTCGAGTCCCTAGGCGCCAGCATGGGTGTGCGAAGCT
GCGTCATCGTCGGTGGCATGGACATGGTCTCTCAGTCAATTTCCCTCGGC
AAAAAGCCCCATATCATCGTGGCCACCCCTGGTCGTCTTCTGGACCACCT
CGAGAACACCAAGGGCTTCTCCCTCCGCAACCTGAAGTACCTGGTGATGG
ACGAAGCGGATCGACTTCTTGACATGGACTTCGGACCCCTCCTCGACAAG
ATCCTGAAAGTCCTGCCCCGTGAGCGCCGCACATTCCTCTTCTCTGCGAC
GATGAGCTCAAAGGTCGAATCCCTCCAACGTGCCTCCCTCTCCAATCCGC
TCCGTGTCTCTGTCTCCACAAGCAAATACCAGACCGTCTCGACTCTCCTC
CAATCTTACCTCTTCATTCCCCAGAAGCACAAGGACCTGTACCTTGTCTA
CCTGTTGAACGAATTCGCCGGCCAGAGTACTATCATCTTCACGAGGACGG
TGAACGAGACGCAGAGACTTGCGTTCTTGCTTCGTGCGCTTGGCTTCGGC
GCTATCCCGCTGCATGGACAGCTTTCACAGTCTGCTCGTCTCGGTGCGCT
GGGCAAGTTCCGTGCTCGTAGTCGGAATATTCTTGTCGCGACGGATGTGG
CTGCTCGTGGTTTGGATATTCCGTCCGTTGATGTTGTGCTTAACTTTGAT
TTGCCGGGTGATTCTCCCAGCTATGTCCACCGTGTCGGACGTACTGCCCG
TGCTGGAAAGAGTGGTCTTGCTATCAGCTTTGTCGCCCAGTACGATGTTG
AGGTTTGGCTGAGGATCGAAGGTGCTTTGGGCAAGAAGCTCAAGGAATAC
GACTGCCCTAAGGATGAGGTCATGGTGCTTGGTGAGAATGTCGCGGAGGC
GCAACGGCAGGCGATTATGGATATGAAGGATTACAATGAGAAGAAGGGAA
GCAGGGGCAAGAAGTTCGGTGGGAAGCGTTCCCGGGATGAGATGGATCAA
GAGGAGGGTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0005524ATP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RRP3ASPNIDRAFT_54204Aspergillus niger ATCC 1015gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54204-T1.utr5p1ASPNIDRAFT_54204-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54204-T1.exon1ASPNIDRAFT_54204-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_54204-T1.exon2ASPNIDRAFT_54204-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_54204-T1.exon3ASPNIDRAFT_54204-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54204-T1.cdsASPNIDRAFT_54204-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54204-T1ASPNIDRAFT_54204-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR014014
DBxrefInterPro:IPR000629
DBxrefInterPro:IPR011545
DBxrefInterPro:IPR001650
DBxrefInterPro:IPR014001
DBxrefPFAM:PF04851
DBxrefPFAM:PF00271
DBxrefPFAM:PF00270
Productribosomal RNA processing protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000020.1supercontigACJE01000020.1:1204803..1206387 +
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