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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000020.1:1449959..1450858+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_43012-T1 ID=ASPNIDRAFT_43012-T1|Name=ASPNIDRAFT_43012-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=900bp|location=Sequence derived from alignment at ACJE01000020.1:1449959..1450858+ (Aspergillus niger ATCC 1015)
ATGCATGAGCTTCTGCTCTTCGCCTCGGTTCCCGCGCACCAGCATCATGA
GCTTCTTCAACAGCTGGCCGGGTTGACGGCCATGCAACCCCGTCACCGCC
TGGAAAGACGCTTGGTTTTCAAGGCCTACCGCAAGCCAGGCTTGACCAAC
ACCCGGGTTGGGGCCAGTCAAGATCTGCAGGGTGTCGAATTGCAGCGCCT
TAATAAGATGCTCAATGGAGGCATGTTCTATACCCAAGTAGTCGGTCCCG
TGGCCAAAGCCGACTTTGGCGGGAACCCTTCCTCGTCGGGAGATCCAGAT
GTCTCCATGTCCGGATTGGAGGAGAAGCCATCGTCATCTTCGTCTTCTTA
CAGTTATGAGGATCAGCCCTGGAAACTCGAATTTAGAGATATCCCCGAGG
CAGGCACTCGATCCGCGGTAACTGCTCGGCTGATGGCTAGTGCCACGCTG
CCTAAAGGTGATATCACGGCGCCCATGAATGCCTGGGGTTATAGGTTAGT
AGCTTCCCATGCCATTCGGTGTTATATCAGCTCCTCCATATCTTGATTGG
TCCTAGTCGGCTGACAAACTGGGTTCAGCTTTGTCACTGAGTACGTGGTG
GAAGGAGATGTCTTTGTTCTCAATGACATCGTTATCTTCCTACACCGTGT
CCTGCTTTACCCGACTGGGGCGCAGGAATCACATGGACCTCGTCGGCAGC
TGCCTGCGTATCAGGAGCTCTCACCGCTGGAACGGACAGGGAGCTATGTC
CTGCAAGCTGCTATCACCGTCCAGGATGGCGGGAATCAGGAGATGATGAG
GACGGCTTCGCAGCATTTGTTCGGGCTTCGCGAGCAGCTCAAGTCGGCTG
TCCGTCTAGAAATGGCGGACCGGCTGTCTCTGGATACGCGAGCGAAGTAA
back to topCoding sequence (CDS) from alignment at ACJE01000020.1:1449959..1450858+ >ASPNIDRAFT_43012-T1 ID=ASPNIDRAFT_43012-T1|Name=ASPNIDRAFT_43012-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1632bp|location=Sequence derived from alignment at ACJE01000020.1:1449959..1450858+ (Aspergillus niger ATCC 1015)
ATGCATGAGCTTCTGCTCTTCGCCTCGGTTCCCGCGCACCAGCATCATGA
GCTTCTTCAACAGCTGGCCGGGTTGACGGCCATGCAACCCCGTCACCGCC
TGGAAAGACGCTTGGTTTTCAAGGCCTACCGCAAGCCAGGCTTGACCAAC
ACCCGGGTTGGGGCCAGTCAAGATCTGCAGGGTGTCGAATTGCAGCGCCT
TAATAAGATGCTCAATGGAGGCATGTTCTATACCCAAGTAGTCGGTCCCG
TGGCCAAAGCCGACTTTGGCGGGAACCCTTCCTCGTCGGGAGATCCAGAT
GTCTCCATGTCCGGATTGGAGGAGAAGCCATCGTCATCTTCGTCTTCTTA
CAGTTATGAGGATCAGCCCTGGAAACTCGAATTTAGAGATATCCCCGAGG
CAGGCACTCGATCCGCGGTAACTGCTCGGCTGATGGCTAGTGCCACGCTG
CCTAAAGGTGATATCACGGCGCCCATGAATGCCTGGGGTTATAGCTTTGT
CACTGAGTACGTGGTGGAAGGAGATGTCTTTGTTCTCAATGACATCGTTA
TCTTCCTACACCGTGTCCTGCTTTACCCGACTGGGGCGCAGGAATCACAT
GGACCTCGTCGGCAGCTGCCTGCGTATCAGGAGCTCTCACCGCTGGAACG
GACAGGGAGCTATGTCCTGCAAGCTGCTATCACCGTCCAGGATGGCGGGA
ATCAGGAGATGATGAGGACGGCTTCGCAGCATTTGTTCGGGCTTCGCGAG
CAGCTCAAGTCGGCTGTCCGTCTAGAAATGGCGGACCGGCTGTCTCTGGA
TACGCGAGCGAAGTAAATGCATGAGCTTCTGCTCTTCGCCTCGGTTCCCG
CGCACCAGCATCATGAGCTTCTTCAACAGCTGGCCGGGTTGACGGCCATG
CAACCCCGTCACCGCCTGGAAAGACGCTTGGTTTTCAAGGCCTACCGCAA
GCCAGGCTTGACCAACACCCGGGTTGGGGCCAGTCAAGATCTGCAGGGTG
TCGAATTGCAGCGCCTTAATAAGATGCTCAATGGAGGCATGTTCTATACC
CAAGTAGTCGGTCCCGTGGCCAAAGCCGACTTTGGCGGGAACCCTTCCTC
GTCGGGAGATCCAGATGTCTCCATGTCCGGATTGGAGGAGAAGCCATCGT
CATCTTCGTCTTCTTACAGTTATGAGGATCAGCCCTGGAAACTCGAATTT
AGAGATATCCCCGAGGCAGGCACTCGATCCGCGGTAACTGCTCGGCTGAT
GGCTAGTGCCACGCTGCCTAAAGGTGATATCACGGCGCCCATGAATGCCT
GGGGTTATAGCTTTGTCACTGAGTACGTGGTGGAAGGAGATGTCTTTGTT
CTCAATGACATCGTTATCTTCCTACACCGTGTCCTGCTTTACCCGACTGG
GGCGCAGGAATCACATGGACCTCGTCGGCAGCTGCCTGCGTATCAGGAGC
TCTCACCGCTGGAACGGACAGGGAGCTATGTCCTGCAAGCTGCTATCACC
GTCCAGGATGGCGGGAATCAGGAGATGATGAGGACGGCTTCGCAGCATTT
GTTCGGGCTTCGCGAGCAGCTCAAGTCGGCTGTCCGTCTAGAAATGGCGG
ACCGGCTGTCTCTGGATACGCGAGCGAAGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016592 | mediator complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006357 | regulation of transcription by RNA polymerase II |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003712 | transcription coregulator activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR019095 |
| DBxref | PFAM:PF09637 |
| Product | Mediator of RNA polymerase II transcription subunit 18 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000020.1 | supercontig | ACJE01000020.1:1449959..1450858 + |
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