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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000020.1:1594303..1595643+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_54270-T1 ID=ASPNIDRAFT_54270-T1|Name=ASPNIDRAFT_54270-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1341bp|location=Sequence derived from alignment at ACJE01000020.1:1594303..1595643+ (Aspergillus niger ATCC 1015)
GTCACATTGTGCCTTACTTTGTCTTTCCATACTCGGGGCTGCAGACCTCA
CTTACAGGTTTATTTTCAAGTGTGCCCTCAAAAGGAACATTCAGCGTTCA
GAAGTATTGAATTGATTTGCCTCTCGGATTAAAACGAATCATGACTTTAC
AGGCAATCAGATATAATGATGGCGATTTGTCTATTATAGATCAGTTGCAG
CTTCCATATGTTGAACGTTACATAACGGTACAATCGAGTGAGGAAGCATG
GCACGCAATAAAAGATATGCGAGTAAGAGGGGCACCCGCTATTGCCATTG
TAGCGGCCCTCGCTCTTGCATCCGAGCTTCATAGGCTCATGGCATGCAAT
AACATACCTTCGGAAGCCCCAGAGGTTCAAGCCTTTATTGCGAAAAAGCT
CGATTATCTCGTGAGCAGCAGGCCCACAGCAGTGAATCTTGCCGATGCTG
CTCGGAAACTCAGGGCCGTGGCGAGTGATCATACACAAAGGCCTGGATCG
ACCGGGCGCAGCGTCGCTACTGCTTTGATACAAGCAGCAGAGGAAATGCT
GAAGAAGGATATCGAGGACAATAAAAACATAGGAAAGCATGGTGCCCAAT
GGATCATGGCCAATGCCGCGGGTAAGCCGAAGGCTACTGTTCTCACTCAT
TGCAATACGGGGTAAGTACAGCGAAGCTCAACTGCAGGTTATCCGGTTCT
AACCCGCTGTCAGCTCCCTTGCAACATCAGGATACGGCACTGCGCTCGGG
GTTATCCGCGCCCTTGCGTCTGCAGACAATTTGAACCATGCTTACTGCAC
CGAGACACGACCCTACAATCAAGGATCTCGGTTGACTGCGTTCGAATTGG
TCCACGACCGTCTCCCCGCCACCCTCATAACAGACTCCATGGCCGCTGCT
CTACTTGCGAAGTCTGGTTCTAAGGTAGATGCCATCGTAGTGGGGGCGGA
TAGGGTGGCTGCTAACGGAGATACGGCGAATAAAATTGGTACTTATGGCC
TCGCTGTGCTTGCAAGGTATCACGGTGTAAAGTTCCTCGTCGCTGCACCG
CTTACTACAATTGATCTGGCCACCCCATCCGGGAATGAAATCATAATCGA
GGAACGTGCGGCCTCCGAGGTCACAAATGTCAGAGGGCCGCGTGCCAGCA
ATTCTACCAATGGGATTGAACTAGAAACTGTGCGCATAGCCGCCGATGGC
ATCGATGTCTGGAACCCGGCCTTTGATGTCACACCGTCCACACTTATTGA
CGGTATCATTACAGAGAGGGGCGTGGTCGAGAAGGACGCCAGTGGACAAT
TTCACTTGGAGGACTTGTTTCGCAACTCATCTTCAACATGA back to topCoding sequence (CDS) from alignment at ACJE01000020.1:1594303..1595643+ >ASPNIDRAFT_54270-T1 ID=ASPNIDRAFT_54270-T1|Name=ASPNIDRAFT_54270-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2298bp|location=Sequence derived from alignment at ACJE01000020.1:1594303..1595643+ (Aspergillus niger ATCC 1015)
ATGACTTTACAGGCAATCAGATATAATGATGGCGATTTGTCTATTATAGA
TCAGTTGCAGCTTCCATATGTTGAACGTTACATAACGGTACAATCGAGTG
AGGAAGCATGGCACGCAATAAAAGATATGCGAGTAAGAGGGGCACCCGCT
ATTGCCATTGTAGCGGCCCTCGCTCTTGCATCCGAGCTTCATAGGCTCAT
GGCATGCAATAACATACCTTCGGAAGCCCCAGAGGTTCAAGCCTTTATTG
CGAAAAAGCTCGATTATCTCGTGAGCAGCAGGCCCACAGCAGTGAATCTT
GCCGATGCTGCTCGGAAACTCAGGGCCGTGGCGAGTGATCATACACAAAG
GCCTGGATCGACCGGGCGCAGCGTCGCTACTGCTTTGATACAAGCAGCAG
AGGAAATGCTGAAGAAGGATATCGAGGACAATAAAAACATAGGAAAGCAT
GGTGCCCAATGGATCATGGCCAATGCCGCGGGTAAGCCGAAGGCTACTGT
TCTCACTCATTGCAATACGGGCTCCCTTGCAACATCAGGATACGGCACTG
CGCTCGGGGTTATCCGCGCCCTTGCGTCTGCAGACAATTTGAACCATGCT
TACTGCACCGAGACACGACCCTACAATCAAGGATCTCGGTTGACTGCGTT
CGAATTGGTCCACGACCGTCTCCCCGCCACCCTCATAACAGACTCCATGG
CCGCTGCTCTACTTGCGAAGTCTGGTTCTAAGGTAGATGCCATCGTAGTG
GGGGCGGATAGGGTGGCTGCTAACGGAGATACGGCGAATAAAATTGGTAC
TTATGGCCTCGCTGTGCTTGCAAGGTATCACGGTGTAAAGTTCCTCGTCG
CTGCACCGCTTACTACAATTGATCTGGCCACCCCATCCGGGAATGAAATC
ATAATCGAGGAACGTGCGGCCTCCGAGGTCACAAATGTCAGAGGGCCGCG
TGCCAGCAATTCTACCAATGGGATTGAACTAGAAACTGTGCGCATAGCCG
CCGATGGCATCGATGTCTGGAACCCGGCCTTTGATGTCACACCGTCCACA
CTTATTGACGGTATCATTACAGAGAGGGGCGTGGTCGAGAAGGACGCCAG
TGGACAATTTCACTTGGAGGACTTGTTTCGCAACTCATCTTCAACATGAA
TGACTTTACAGGCAATCAGATATAATGATGGCGATTTGTCTATTATAGAT
CAGTTGCAGCTTCCATATGTTGAACGTTACATAACGGTACAATCGAGTGA
GGAAGCATGGCACGCAATAAAAGATATGCGAGTAAGAGGGGCACCCGCTA
TTGCCATTGTAGCGGCCCTCGCTCTTGCATCCGAGCTTCATAGGCTCATG
GCATGCAATAACATACCTTCGGAAGCCCCAGAGGTTCAAGCCTTTATTGC
GAAAAAGCTCGATTATCTCGTGAGCAGCAGGCCCACAGCAGTGAATCTTG
CCGATGCTGCTCGGAAACTCAGGGCCGTGGCGAGTGATCATACACAAAGG
CCTGGATCGACCGGGCGCAGCGTCGCTACTGCTTTGATACAAGCAGCAGA
GGAAATGCTGAAGAAGGATATCGAGGACAATAAAAACATAGGAAAGCATG
GTGCCCAATGGATCATGGCCAATGCCGCGGGTAAGCCGAAGGCTACTGTT
CTCACTCATTGCAATACGGGCTCCCTTGCAACATCAGGATACGGCACTGC
GCTCGGGGTTATCCGCGCCCTTGCGTCTGCAGACAATTTGAACCATGCTT
ACTGCACCGAGACACGACCCTACAATCAAGGATCTCGGTTGACTGCGTTC
GAATTGGTCCACGACCGTCTCCCCGCCACCCTCATAACAGACTCCATGGC
CGCTGCTCTACTTGCGAAGTCTGGTTCTAAGGTAGATGCCATCGTAGTGG
GGGCGGATAGGGTGGCTGCTAACGGAGATACGGCGAATAAAATTGGTACT
TATGGCCTCGCTGTGCTTGCAAGGTATCACGGTGTAAAGTTCCTCGTCGC
TGCACCGCTTACTACAATTGATCTGGCCACCCCATCCGGGAATGAAATCA
TAATCGAGGAACGTGCGGCCTCCGAGGTCACAAATGTCAGAGGGCCGCGT
GCCAGCAATTCTACCAATGGGATTGAACTAGAAACTGTGCGCATAGCCGC
CGATGGCATCGATGTCTGGAACCCGGCCTTTGATGTCACACCGTCCACAC
TTATTGACGGTATCATTACAGAGAGGGGCGTGGTCGAGAAGGACGCCAGT
GGACAATTTCACTTGGAGGACTTGTTTCGCAACTCATCTTCAACATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0044237 | cellular metabolic process |
| GO:0044249 | cellular biosynthetic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR037171 |
| DBxref | InterPro:IPR000649 |
| DBxref | InterPro:IPR011559 |
| DBxref | InterPro:IPR042529 |
| DBxref | InterPro:IPR005251 |
| DBxref | PFAM:PF01008 |
| Product | S-methyl-5-thioribose-1-phosphate isomerase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000020.1 | supercontig | ACJE01000020.1:1594303..1595643 + |
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