You are here

Home

ASPNIDRAFT_175821-T1, ASPNIDRAFT_175821-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_175821-T1
Unique NameASPNIDRAFT_175821-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000021.1:4981..5733+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_175821-T1 ID=ASPNIDRAFT_175821-T1|Name=ASPNIDRAFT_175821-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=753bp|location=Sequence derived from alignment at ACJE01000021.1:4981..5733+ (Aspergillus niger ATCC 1015)
GGTGTCCCTTTGCATCCATCTGCAAAGGATGCGCTGGGAACCGCTGCAGA
TGACCCGACCGGTCCAGTAGTTCAGGCCATCCGCCTTCTTCGTTCGCGCT
TTCCTCAACTTTATATCGTGACGGATGTTTGTCTTTGTGAATATACCTCA
CATGGTCATTGCGGGATACTACGTGAGGATGGGACGCTCGATAACGCACA
GTCCGTTGATAGAATCTCAGATGTAGCCCTCGCCTATGCTGCTGCCGGTG
CTCACTGCGTGGCTCCGTCAGATATGAATGACGGCAGAGTCCGCGCCATA
AAGCTGAAGCTTATTGAAGCTGGTATAGCTCATCGTGTCCTCCTAATGTC
CTACAGTGCAAAATTCAGTGGATGTCTATATGGTCCCTTCCGAGATGCCG
CAGGCTCTTGCCCATCCTTCGGAGACCGCAGGTGTTACCAATTACCCCCA
GGTGGCCGGGGGCTTGCTCGGCGAGCGATACAGCGCGATATTGGTGAGGG
CGCAGACATCATAATGGTGAAGCCCGCTAGTAGCTATTTGGATATCATAC
GGGACGCCAAGGAGCTCGCCAAAGACATGCCAGTTGCCGCTTACCAAGTT
AGCGGAGAGTATGCCATGATACATGCAGGGGCTAAGGCTGGCGTTTTCGA
TTTGAAATCAATGGCTTTCGAGAGCACAGAGGGTATACTACGGGCAGGAG
CTGGTATTATTGTGAGCTACTTTGTGCCCGACTTTCTGGATTGGCTTTCT
TAA
back to top

Coding sequence (CDS) from alignment at ACJE01000021.1:4981..5733+

>ASPNIDRAFT_175821-T1 ID=ASPNIDRAFT_175821-T1|Name=ASPNIDRAFT_175821-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=753bp|location=Sequence derived from alignment at ACJE01000021.1:4981..5733+ (Aspergillus niger ATCC 1015)
GGTGTCCCTTTGCATCCATCTGCAAAGGATGCGCTGGGAACCGCTGCAGA
TGACCCGACCGGTCCAGTAGTTCAGGCCATCCGCCTTCTTCGTTCGCGCT
TTCCTCAACTTTATATCGTGACGGATGTTTGTCTTTGTGAATATACCTCA
CATGGTCATTGCGGGATACTACGTGAGGATGGGACGCTCGATAACGCACA
GTCCGTTGATAGAATCTCAGATGTAGCCCTCGCCTATGCTGCTGCCGGTG
CTCACTGCGTGGCTCCGTCAGATATGAATGACGGCAGAGTCCGCGCCATA
AAGCTGAAGCTTATTGAAGCTGGTATAGCTCATCGTGTCCTCCTAATGTC
CTACAGTGCAAAATTCAGTGGATGTCTATATGGTCCCTTCCGAGATGCCG
CAGGCTCTTGCCCATCCTTCGGAGACCGCAGGTGTTACCAATTACCCCCA
GGTGGCCGGGGGCTTGCTCGGCGAGCGATACAGCGCGATATTGGTGAGGG
CGCAGACATCATAATGGTGAAGCCCGCTAGTAGCTATTTGGATATCATAC
GGGACGCCAAGGAGCTCGCCAAAGACATGCCAGTTGCCGCTTACCAAGTT
AGCGGAGAGTATGCCATGATACATGCAGGGGCTAAGGCTGGCGTTTTCGA
TTTGAAATCAATGGCTTTCGAGAGCACAGAGGGTATACTACGGGCAGGAG
CTGGTATTATTGTGAGCTACTTTGTGCCCGACTTTCTGGATTGGCTTTCT
TAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0033014tetrapyrrole biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0046872metal ion binding
GO:0004655porphobilinogen synthase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
HEM2ASPNIDRAFT_175821Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_175821-T1.exon1ASPNIDRAFT_175821-T1.exon1Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_175821-T1.cdsASPNIDRAFT_175821-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_175821-T1ASPNIDRAFT_175821-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR030656
DBxrefInterPro:IPR013785
DBxrefInterPro:IPR001731
DBxrefPFAM:PF00490
ProductAminolevulinate dehydratase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000021.1supercontigACJE01000021.1:4981..5733 +
Powered by Drupal