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ASPNIDRAFT_198253-T1, ASPNIDRAFT_198253-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_198253-T1
Unique NameASPNIDRAFT_198253-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000021.1:2409932..2411385+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_198253-T1 ID=ASPNIDRAFT_198253-T1|Name=ASPNIDRAFT_198253-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1454bp|location=Sequence derived from alignment at ACJE01000021.1:2409932..2411385+ (Aspergillus niger ATCC 1015)
CTCCCTGTCCAACCCCCTCGTTCTATCGAACTCCCCTCGGTCGCTTCGTC
CATCGAGTGTCGCATCTCACTGTCGACTTTTAATTTCCGTCGACTTCTAT
CGCAGACTCTGTATCGCTTCTCTTCATCTCCAACCCCTCACATCACATCC
AACCTTCATCATGGCTGCTCAGGTACCGACCTTCAAGCTTGTCCTCGTCG
GTGACGGTGGTACTGGAAAGGCAAGTTAAAACAAGAATTTCTTATCCCAT
ATGGCTTACTGGGTGGAGGTGGCATGTCACCTCTTCGACGCCTCTTTATG
CTCGACTGCATTCCTGCCATGCGCGTTTACCCCTCTCTGTTGCCCGTCGT
CTCTATCAACAGAAAACTTCATCGCCCGCCCAACCTCACCCAGACGAGAC
ATCATTACTGACTGAGGATTTTCACTGCAGACCACCTTCGTCAAGCGCCA
CTTGACTGGCGAGTTCGAGAAGAAGTACATCGCCACTCTCGGTGTCGAAG
TGCACCCTCTCGCTTTTAACACCGTATGCCCCGCCGGAAACCCCGCTTTG
TCCATTCCGCCGTCTTTGTGCCGGTCCGACTAACGCTTTTGCCAGAACCT
GGGTAACATCCAGTTCGACGTCTGGGACACTGCTGGTCAGGAGAAGTTCG
GTGGTCTTCGCGATGGTTACTACATCAACGGACAGTGCGGTATCATCATG
TTCGATGTTACCTCCCGTATCACCTACAAGAACGTCCCCAACTGGCACCG
TAAGTGCTTCCACAAATCAGCACTCGAACCACGCGCAATATGGATCAAAT
TGACAAATTCACTCTAGGTGATCTCGTCCGTGTCTGCGAGGGTATCCCCA
TCGTGCTGTGCGGTAACAAGGTCGATGTTAAGGAGCGTAAGGTGAAGGCC
AAGACCATCACCTTCCACCGCAAGAAGAACCTCCAGTACTACGACATCTC
CGCCAAGTCCAACTACAATTTCGAGAAGCCCTTCCTCTGGCTCGCTCGCA
AGTTGGTCGGCAACCCCCAGCTGGTAAGTCAGACACGGTCATTGGTCGCT
TTCACTGGTGAGACTGGAAGCTAACAAGCATTTCCCAGGAATTCGTTGCT
GCCCCCGCTCTTGCTCCCCCCGAGGTCCAAGTCAACCCGGAGCTTCTGGC
CCAGTACGAGAAGGAGATGGACGCTGCTGCCAACATGCCCCTGCCCGACG
AGGAGGACGCCGATTTGTAAACGCGCGATCAATGAAGGCTGGAACCAGAG
CCTGGGTCACGAGCTCGGGCTCGTGGCTGCTGTTCTGTCCCAATAACTGG
GTACGTTATGCAAGATTTCAAATCACGATACAATGATAGCGGAGGGAGGA
AATTAAGCCCGAGAACGGTCGGCATGATTATGCATTTGCAATATTTACCA
CTAGTAGTCTAGACTCTGATTATCTCTACAAAGTTCCTTTTTGATAACGG
TGAC
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Coding sequence (CDS) from alignment at ACJE01000021.1:2409932..2411385+

>ASPNIDRAFT_198253-T1 ID=ASPNIDRAFT_198253-T1|Name=ASPNIDRAFT_198253-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3225bp|location=Sequence derived from alignment at ACJE01000021.1:2409932..2411385+ (Aspergillus niger ATCC 1015)
ATGGCTGCTCAGGTACCGACCTTCAAGCTTGTCCTCGTCGGTGACGGTGG
TACTGGAAAGACCACCTTCGTCAAGCGCCACTTGACTGGCGAGTTCGAGA
AGAAGTACATCGCCACTCTCGGTGTCGAAGTGCACCCTCTCGCTTTTAAC
ACCAACCTGGGTAACATCCAGTTCGACGTCTGGGACACTGCTGGTCAGGA
GAAGTTCGGTGGTCTTCGCGATGGTTACTACATCAACGGACAGTGCGGTA
TCATCATGTTCGATGTTACCTCCCGTATCACCTACAAGAACGTCCCCAAC
TGGCACCGTGATCTCGTCCGTGTCTGCGAGGGTATCCCCATCGTGCTGTG
CGGTAACAAGGTCGATGTTAAGGAGCGTAAGGTGAAGGCCAAGACCATCA
CCTTCCACCGCAAGAAGAACCTCCAGTACTACGACATCTCCGCCAAGTCC
AACTACAATTTCGAGAAGCCCTTCCTCTGGCTCGCTCGCAAGTTGGTCGG
CAACCCCCAGCTGGAATTCGTTGCTGCCCCCGCTCTTGCTCCCCCCGAGG
TCCAAGTCAACCCGGAGCTTCTGGCCCAGTACGAGAAGGAGATGGACGCT
GCTGCCAACATGCCCCTGCCCGACGAGGAGGACGCCGATTTGTAAATGGC
TGCTCAGGTACCGACCTTCAAGCTTGTCCTCGTCGGTGACGGTGGTACTG
GAAAGACCACCTTCGTCAAGCGCCACTTGACTGGCGAGTTCGAGAAGAAG
TACATCGCCACTCTCGGTGTCGAAGTGCACCCTCTCGCTTTTAACACCAA
CCTGGGTAACATCCAGTTCGACGTCTGGGACACTGCTGGTCAGGAGAAGT
TCGGTGGTCTTCGCGATGGTTACTACATCAACGGACAGTGCGGTATCATC
ATGTTCGATGTTACCTCCCGTATCACCTACAAGAACGTCCCCAACTGGCA
CCGTGATCTCGTCCGTGTCTGCGAGGGTATCCCCATCGTGCTGTGCGGTA
ACAAGGTCGATGTTAAGGAGCGTAAGGTGAAGGCCAAGACCATCACCTTC
CACCGCAAGAAGAACCTCCAGTACTACGACATCTCCGCCAAGTCCAACTA
CAATTTCGAGAAGCCCTTCCTCTGGCTCGCTCGCAAGTTGGTCGGCAACC
CCCAGCTGGAATTCGTTGCTGCCCCCGCTCTTGCTCCCCCCGAGGTCCAA
GTCAACCCGGAGCTTCTGGCCCAGTACGAGAAGGAGATGGACGCTGCTGC
CAACATGCCCCTGCCCGACGAGGAGGACGCCGATTTGTAAATGGCTGCTC
AGGTACCGACCTTCAAGCTTGTCCTCGTCGGTGACGGTGGTACTGGAAAG
ACCACCTTCGTCAAGCGCCACTTGACTGGCGAGTTCGAGAAGAAGTACAT
CGCCACTCTCGGTGTCGAAGTGCACCCTCTCGCTTTTAACACCAACCTGG
GTAACATCCAGTTCGACGTCTGGGACACTGCTGGTCAGGAGAAGTTCGGT
GGTCTTCGCGATGGTTACTACATCAACGGACAGTGCGGTATCATCATGTT
CGATGTTACCTCCCGTATCACCTACAAGAACGTCCCCAACTGGCACCGTG
ATCTCGTCCGTGTCTGCGAGGGTATCCCCATCGTGCTGTGCGGTAACAAG
GTCGATGTTAAGGAGCGTAAGGTGAAGGCCAAGACCATCACCTTCCACCG
CAAGAAGAACCTCCAGTACTACGACATCTCCGCCAAGTCCAACTACAATT
TCGAGAAGCCCTTCCTCTGGCTCGCTCGCAAGTTGGTCGGCAACCCCCAG
CTGGAATTCGTTGCTGCCCCCGCTCTTGCTCCCCCCGAGGTCCAAGTCAA
CCCGGAGCTTCTGGCCCAGTACGAGAAGGAGATGGACGCTGCTGCCAACA
TGCCCCTGCCCGACGAGGAGGACGCCGATTTGTAAATGGCTGCTCAGGTA
CCGACCTTCAAGCTTGTCCTCGTCGGTGACGGTGGTACTGGAAAGACCAC
CTTCGTCAAGCGCCACTTGACTGGCGAGTTCGAGAAGAAGTACATCGCCA
CTCTCGGTGTCGAAGTGCACCCTCTCGCTTTTAACACCAACCTGGGTAAC
ATCCAGTTCGACGTCTGGGACACTGCTGGTCAGGAGAAGTTCGGTGGTCT
TCGCGATGGTTACTACATCAACGGACAGTGCGGTATCATCATGTTCGATG
TTACCTCCCGTATCACCTACAAGAACGTCCCCAACTGGCACCGTGATCTC
GTCCGTGTCTGCGAGGGTATCCCCATCGTGCTGTGCGGTAACAAGGTCGA
TGTTAAGGAGCGTAAGGTGAAGGCCAAGACCATCACCTTCCACCGCAAGA
AGAACCTCCAGTACTACGACATCTCCGCCAAGTCCAACTACAATTTCGAG
AAGCCCTTCCTCTGGCTCGCTCGCAAGTTGGTCGGCAACCCCCAGCTGGA
ATTCGTTGCTGCCCCCGCTCTTGCTCCCCCCGAGGTCCAAGTCAACCCGG
AGCTTCTGGCCCAGTACGAGAAGGAGATGGACGCTGCTGCCAACATGCCC
CTGCCCGACGAGGAGGACGCCGATTTGTAAATGGCTGCTCAGGTACCGAC
CTTCAAGCTTGTCCTCGTCGGTGACGGTGGTACTGGAAAGACCACCTTCG
TCAAGCGCCACTTGACTGGCGAGTTCGAGAAGAAGTACATCGCCACTCTC
GGTGTCGAAGTGCACCCTCTCGCTTTTAACACCAACCTGGGTAACATCCA
GTTCGACGTCTGGGACACTGCTGGTCAGGAGAAGTTCGGTGGTCTTCGCG
ATGGTTACTACATCAACGGACAGTGCGGTATCATCATGTTCGATGTTACC
TCCCGTATCACCTACAAGAACGTCCCCAACTGGCACCGTGATCTCGTCCG
TGTCTGCGAGGGTATCCCCATCGTGCTGTGCGGTAACAAGGTCGATGTTA
AGGAGCGTAAGGTGAAGGCCAAGACCATCACCTTCCACCGCAAGAAGAAC
CTCCAGTACTACGACATCTCCGCCAAGTCCAACTACAATTTCGAGAAGCC
CTTCCTCTGGCTCGCTCGCAAGTTGGTCGGCAACCCCCAGCTGGAATTCG
TTGCTGCCCCCGCTCTTGCTCCCCCCGAGGTCCAAGTCAACCCGGAGCTT
CTGGCCCAGTACGAGAAGGAGATGGACGCTGCTGCCAACATGCCCCTGCC
CGACGAGGAGGACGCCGATTTGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006913nucleocytoplasmic transport
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0003924GTPase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
GSP1ASPNIDRAFT_198253Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_198253-T1ASPNIDRAFT_198253-T1-proteinAspergillus niger ATCC 1015polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_198253-T1.utr5p1ASPNIDRAFT_198253-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_198253-T1.exon1ASPNIDRAFT_198253-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_198253-T1.exon2ASPNIDRAFT_198253-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_198253-T1.exon3ASPNIDRAFT_198253-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_198253-T1.exon4ASPNIDRAFT_198253-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_198253-T1.exon5ASPNIDRAFT_198253-T1.exon5Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_198253-T1.cdsASPNIDRAFT_198253-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_198253-T1.utr3p1ASPNIDRAFT_198253-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09264LKR
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR005225
DBxrefInterPro:IPR001806
DBxrefInterPro:IPR002041
DBxrefPFAM:PF08477
DBxrefPFAM:PF00071
DBxrefPFAM:PF00025
ProductGTP-binding nuclear protein gsp1/Ran
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000021.1supercontigACJE01000021.1:2409932..2411385 +
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