You are here

Home

CBS51388_001268-T1, CBS51388_001268-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_001268-T1
Unique NameCBS51388_001268-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An02:93601..94622+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_001268-T1 ID=CBS51388_001268-T1|Name=CBS51388_001268-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1022bp|location=Sequence derived from alignment at An02:93601..94622+ (Aspergillus niger CBS 513.88)
ATGGAAGGGAAGCATTTAGAACCCCTAGCAGTTGTTGGCATCTCTCTCCG
CTTTCCCGGGGAGGCTGTCACACCTGGCGCCTTCTGGGACTTGATCCTTA
GTGGCAGAGCTGCGGCAAAGGAGGTTCCTCCAGACCGATATGACATTGAA
GCATGGTACGATCCAGACTACAGTCATTTGGACCGGGTGTCCCAGCGGAA
GGCGAACTTCTTGGAAGGGGATATCGGCCATTTCGATGCAGGCTTTTTCT
CCATCTCTGCTGCGGAAGCCGAGGCGATGGACCCGCAGCAGCGGCTCGCC
CTCGAAGCAGCGTACCATGCCCTCGAAAATGCAGGATATCCTATTGAGTC
TATTACTGGGTCAAGGATGGCTGTTTTCACTGGTGCATTTGGTAATGACT
ATCAGCGTCTTCACGCAAAAGATCTTATGACCTTACCAAAAGGTCATGCT
ACTGGGACATCCATGAACATGCTCGCGAACCGAGTCAGTTGGTTCTTCAA
TCTCCGAGGCCCAAGTGCAAATGTCGATACTGCATGTTCAAGTAGCCTGA
TGGCCTTGCATCTTGCCTGTCAGTCCATCTGGAATGGCGAATCTTCGATG
GTCTGAATAAGCCCTCCTGCGCCGAGTCATCCGTTGCGCCACTAACTCTC
CGGCAGGGAATGGCAATCGGCTGTAATGCAATTCTTGGCTTAGACACCGT
TATGGCTCTAGACAACCTTGGGATCTTGTCCAAGGATGGCCGCTCGTACA
GCTTTGACCAAAGAGGCAATGGATATTCGCGTGGAGAAGGAGTGGGAGCT
TTGGTAGTACGTCCACTACGTGAGGCTATTAAGAATGGCGACAGCATCCG
AGCCCTCATTCGGTCCACTGGCTCCAACCAGGACGGTAAAACACCGGGTA
TAACACAGCCAAGTATGCAAAGGCAAGAAGACCTCTATCGGGATACATAT
GAGAGAGCTGGCCTAAGCTTGGATGTTACTCGATATGTGGAGGGCCATGG
AACAGGTACGGAAAACAAATAG
back to top

Coding sequence (CDS) from alignment at An02:93601..94622+

>CBS51388_001268-T1 ID=CBS51388_001268-T1|Name=CBS51388_001268-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1872bp|location=Sequence derived from alignment at An02:93601..94622+ (Aspergillus niger CBS 513.88)
ATGGAAGGGAAGCATTTAGAACCCCTAGCAGTTGTTGGCATCTCTCTCCG
CTTTCCCGGGGAGGCTGTCACACCTGGCGCCTTCTGGGACTTGATCCTTA
GTGGCAGAGCTGCGGCAAAGGAGGTTCCTCCAGACCGATATGACATTGAA
GCATGGTACGATCCAGACTACAGTCATTTGGACCGGGTGTCCCAGCGGAA
GGCGAACTTCTTGGAAGGGGATATCGGCCATTTCGATGCAGGCTTTTTCT
CCATCTCTGCTGCGGAAGCCGAGGCGATGGACCCGCAGCAGCGGCTCGCC
CTCGAAGCAGCGTACCATGCCCTCGAAAATGCAGGATATCCTATTGAGTC
TATTACTGGGTCAAGGATGGCTGTTTTCACTGGTGCATTTGGTAATGACT
ATCAGCGTCTTCACGCAAAAGATCTTATGACCTTACCAAAAGGTCATGCT
ACTGGGACATCCATGAACATGCTCGCGAACCGAGTCATCCATCTGGAATG
GCGAATCTTCGATGGTCTGAATAAGCCCTCCTGCGCCGAGTCATCCGTTG
CGCCACTAACTCTCCGGCAGGGAATGGCAATCGGCTGTAATGCAATTCTT
GGCTTAGACACCGTTATGGCTCTAGACAACCTTGGGATCTTGTCCAAGGA
TGGCCGCTCGTACAGCTTTGACCAAAGAGGCAATGGATATTCGCGTGGAG
AAGGAGTGGGAGCTTTGGTAGTACGTCCACTACGTGAGGCTATTAAGAAT
GGCGACAGCATCCGAGCCCTCATTCGGTCCACTGGCTCCAACCAGGACGG
TAAAACACCGGGTATAACACAGCCAAGTATGCAAAGGCAAGAAGACCTCT
ATCGGGATACATATGAGAGAGCTGGCCTAAGCTTGGATGTTACTCGATAT
GTGGAGGGCCATGGAACAGGTACGGAAAACAAATAGATGGAAGGGAAGCA
TTTAGAACCCCTAGCAGTTGTTGGCATCTCTCTCCGCTTTCCCGGGGAGG
CTGTCACACCTGGCGCCTTCTGGGACTTGATCCTTAGTGGCAGAGCTGCG
GCAAAGGAGGTTCCTCCAGACCGATATGACATTGAAGCATGGTACGATCC
AGACTACAGTCATTTGGACCGGGTGTCCCAGCGGAAGGCGAACTTCTTGG
AAGGGGATATCGGCCATTTCGATGCAGGCTTTTTCTCCATCTCTGCTGCG
GAAGCCGAGGCGATGGACCCGCAGCAGCGGCTCGCCCTCGAAGCAGCGTA
CCATGCCCTCGAAAATGCAGGATATCCTATTGAGTCTATTACTGGGTCAA
GGATGGCTGTTTTCACTGGTGCATTTGGTAATGACTATCAGCGTCTTCAC
GCAAAAGATCTTATGACCTTACCAAAAGGTCATGCTACTGGGACATCCAT
GAACATGCTCGCGAACCGAGTCATCCATCTGGAATGGCGAATCTTCGATG
GTCTGAATAAGCCCTCCTGCGCCGAGTCATCCGTTGCGCCACTAACTCTC
CGGCAGGGAATGGCAATCGGCTGTAATGCAATTCTTGGCTTAGACACCGT
TATGGCTCTAGACAACCTTGGGATCTTGTCCAAGGATGGCCGCTCGTACA
GCTTTGACCAAAGAGGCAATGGATATTCGCGTGGAGAAGGAGTGGGAGCT
TTGGTAGTACGTCCACTACGTGAGGCTATTAAGAATGGCGACAGCATCCG
AGCCCTCATTCGGTCCACTGGCTCCAACCAGGACGGTAAAACACCGGGTA
TAACACAGCCAAGTATGCAAAGGCAAGAAGACCTCTATCGGGATACATAT
GAGAGAGCTGGCCTAAGCTTGGATGTTACTCGATATGTGGAGGGCCATGG
AACAGGTACGGAAAACAAATAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_001268CBS51388_001268Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001268-T1.exon1CBS51388_001268-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_001268-T1.exon2CBS51388_001268-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001268-T1.cdsCBS51388_001268-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001268-T1CBS51388_001268-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR016039
DBxrefInterPro:IPR014030
DBxrefInterPro:IPR014031
DBxrefInterPro:IPR020841
DBxrefPFAM:PF00109
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An02supercontigAn02:93601..94622 +
Powered by Drupal