|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An02:2912457..2914482- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_002164-T1 ID=CBS51388_002164-T1|Name=CBS51388_002164-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2026bp|location=Sequence derived from alignment at An02:2912457..2914482- (Aspergillus niger CBS 513.88)
ATGGGCGACCCCAAGAAATCAGATCGGCCGACCACCCGCAATGCTGCTGC
AGGCGCACCAGCCGTCAAGTCGCCGGATCGTACCGGTCCAAATGCGTTGA
CGATCGCATCACCTCCTGGCTCCAGGACGCCCCCTAGTATGCCGTCGAAG
AAGACCTTATTTTACCCGGAGCCGCAAGGCAGGCGCCAGAATTCTCGAAC
TACCTCTGGGCCAATCGATCCAGACGCCCTTGCGAAGGCTCTGAAGGATT
TTGAGGATGCTGGGCGTCCCCGCGAGAGAACACCGGGTACCAGTCCCAGC
AGGAAGAGGCAGAGAGTGTACGGTGATAGGTCAGTAAAACATTCAATGGT
GCTCTTTGAGAGCGATTCATCGGTCATGACCATGGACCTATGTCCCTTGA
CATCATGTCACTAAACTGTGGATCCTACCTCCAGGTTTATTCCCAATCGT
GAGGGCCAAGACCTTCAAGCAACGTTCAGCTTGCTTCATGAGGACGGCTG
CCCTTCGACACCGTCAAAGTCGAAAAAGCGTGCTCCACATTCGGAGCTTC
ACTTTCAAAAGAGTGAGTCGCATCTGCCGTGATTCTGGCGTTGCCGATCA
CCGTCGCTAACCCCAGTGTAGCCGAAGAAGCAAATCGCATGTACTCGCGA
GTTTTGCGAAGTGAACTGTTTGGGAATACTGTTCCACAGGCCGATTTGGA
TTCCCTATCACCGGACCCGTTGTTGGGTATGGGTAATGGCATTAACGACA
AGACCCGCTCACATACGCCACCTTCACATGTAGTCTCGAACCTACCACCT
GCCAGCATAACACCATCGACGCCCCACAAAAACCTTTTCAACTACGCTTC
CCCACGTGCTGGCTCAGCTCACCCCACACCTTCAAAGACTCCGCGAAGTC
AGCACGGTCCGAACCTCAATGTCCGTTCAGAGCTCTATAGTCTATCACCA
ATCCGCCTCGACAGCCAACGTATTCTGGAGACGCCCCGGAAACAGCCTCG
CTATGTGAACAAGGTACCCTACAAGGTCCTTGATGCGCCCGATCTGCAAG
ATGATTTCTATCTCAACTTAGTCGATTGGGGCAGCAGCAACGTTCTTGGA
GTGGGCCTAGGAAACTCGGTGTACATGTGGAACTCCCAGACAGGCCGCGT
GACGAAACTCTGTGAGCTACGAGATGATACAGTCACAAGTGTTAGCTGGA
TACAAAGGGTGAGTGCCCAGATATTGGTCATCATGTTGGACAGAAGTGCT
AATGGGACTAGGGAACACATCTTTCAATAGGCACAGGCAAGGGTCTTGTA
CAAATATGGGATGCTGAGCGCTGTCGGCGTCTCCGTACGATGATTGGACA
TACGAATCGTGTAGGAGCGTTGGCTTGGAACGATCATATCCTCACGTCCG
GCTCTCGAGACCGACTGATCTTCCATCGAGACGTCCGGTCCCCGGATCAA
TACCTGCGTCGCTTATCTGGTCATAAGCAAGAGGTATGTGGTCTCCGTTG
GAACACAGAAGATGGTCAATTAGCCTCTGGCGGGAACGACAACAAACTGC
TGGTCTGGGACAAGCTCAACGAAACACCGCTTTACCGCTTTTCCGACCAT
ACTGCGGCCGTCAAGGCAATCACTTGGTCTCCACACCAGCATCACCTCCT
CGCATCTGGTGGTGGTACAGCTGATCGAACCATCAAGTTCTGGAACACGT
CGACGGGTTCCTTGATCAAAGAAGTCGACACAGGCAGTCAGGTCTGTAAT
TTGGCGTGGTCGAAGAATTCAGATGAGATCATCAGCACGCACGGCTACAG
CCAGAACCAAATCGTCATCTGGAAGTACCCTCGTATGGAGCAGATTGTCT
CTCTAACCGGCCATACATTCCGAGTACTGTACTTGGCCATGAGTCCTGAT
GGCCAAACAGTTGTCACCGGGGCTGGAGATGAGACCCTGCGGTTCTGGAA
GATCTTCAATAAACGACCGGGCAGAGAGCACGGGCGTGAAGGTAGCAAGC
TAGCAGAATGGGGTACCATACGCTGA back to topCoding sequence (CDS) from alignment at An02:2912457..2914482- >CBS51388_002164-T1 ID=CBS51388_002164-T1|Name=CBS51388_002164-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=7140bp|location=Sequence derived from alignment at An02:2912457..2914482- (Aspergillus niger CBS 513.88)
GGAACACATCTTTCAATAGGCACAGGCAAGGGTCTTGTACAAATATGGGA
TGCTGAGCGCTGTCGGCGTCTCCGTACGATGATTGGACATACGAATCGTG
TAGGAGCGTTGGCTTGGAACGATCATATCCTCACGTCCGGCTCTCGAGAC
CGACTGATCTTCCATCGAGACGTCCGGTCCCCGGATCAATACCTGCGTCG
CTTATCTGGTCATAAGCAAGAGGTATGTGGTCTCCGTTGGAACACAGAAG
ATGGTCAATTAGCCTCTGGCGGGAACGACAACAAACTGCTGGTCTGGGAC
AAGCTCAACGAAACACCGCTTTACCGCTTTTCCGACCATACTGCGGCCGT
CAAGGCAATCACTTGGTCTCCACACCAGCATCACCTCCTCGCATCTGGTG
GTGGTACAGCTGATCGAACCATCAAGTTCTGGAACACGTCGACGGGTTCC
TTGATCAAAGAAGTCGACACAGGCAGTCAGGTCTGTAATTTGGCGTGGTC
GAAGAATTCAGATGAGATCATCAGCACGCACGGCTACAGCCAGAACCAAA
TCGTCATCTGGAAGTACCCTCGTATGGAGCAGATTGTCTCTCTAACCGGC
CATACATTCCGAGTACTGTACTTGGCCATGAGTCCTGATGGCCAAACAGT
TGTCACCGGGGCTGGAGATGAGACCCTGCGGTTCTGGAAGATCTTCAATA
AACGACCGGGCAGAGAGCACGGGCGTGAAGGTAGCAAGCTAGCAGAATGG
GGTACCATACGCTGATGAACTGTTTGGGAATACTGTTCCACAGGCCGATT
TGGATTCCCTATCACCGGACCCGTTGTTGGGTATGGGTAATGGCATTAAC
GACAAGACCCGCTCACATACGCCACCTTCACATGTAGTCTCGAACCTACC
ACCTGCCAGCATAACACCATCGACGCCCCACAAAAACCTTTTCAACTACG
CTTCCCCACGTGCTGGCTCAGCTCACCCCACACCTTCAAAGACTCCGCGA
AGTCAGCACGGTCCGAACCTCAATGTCCGTTCAGAGCTCTATAGTCTATC
ACCAATCCGCCTCGACAGCCAACGTATTCTGGAGACGCCCCGGAAACAGC
CTCGCTATGTGAACAAGGTACCCTACAAGGTCCTTGATGCGCCCGATCTG
CAAGATGATTTCTATCTCAACTTAGTCGATTGGGGCAGCAGCAACGTTCT
TGGAGTGGGCCTAGGAAACTCGGTGTACATGTGGAACTCCCAGACAGGCC
GCGTGACGAAACTCTGTGAGCTACGAGATGATACAGTCACAAGTGTTAGC
TGGATACAAAGGGTTTATTCCCAATCGTGAGGGCCAAGACCTTCAAGCAA
CGTTCAGCTTGCTTCATGAGGACGGCTGCCCTTCGACACCGTCAAAGTCG
AAAAAGCGTGCTCCACATTCGGAGCTTCACTTTCAAAAGAGTGAGTCGCA
TCTGCCATGGGCGACCCCAAGAAATCAGATCGGCCGACCACCCGCAATGC
TGCTGCAGGCGCACCAGCCGTCAAGTCGCCGGATCGTACCGGTCCAAATG
CGTTGACGATCGCATCACCTCCTGGCTCCAGGACGCCCCCTAGTATGCCG
TCGAAGAAGACCTTATTTTACCCGGAGCCGCAAGGCAGGCGCCAGAATTC
TCGAACTACCTCTGGGCCAATCGATCCAGACGCCCTTGCGAAGGCTCTGA
AGGATTTTGAGGATGCTGGGCGTCCCCGCGAGAGAACACCGGGTACCAGT
CCCAGCAGGAAGAGGCAGAGAGTGTACGGTGATAGGGAACACATCTTTCA
ATAGGCACAGGCAAGGGTCTTGTACAAATATGGGATGCTGAGCGCTGTCG
GCGTCTCCGTACGATGATTGGACATACGAATCGTGTAGGAGCGTTGGCTT
GGAACGATCATATCCTCACGTCCGGCTCTCGAGACCGACTGATCTTCCAT
CGAGACGTCCGGTCCCCGGATCAATACCTGCGTCGCTTATCTGGTCATAA
GCAAGAGGTATGTGGTCTCCGTTGGAACACAGAAGATGGTCAATTAGCCT
CTGGCGGGAACGACAACAAACTGCTGGTCTGGGACAAGCTCAACGAAACA
CCGCTTTACCGCTTTTCCGACCATACTGCGGCCGTCAAGGCAATCACTTG
GTCTCCACACCAGCATCACCTCCTCGCATCTGGTGGTGGTACAGCTGATC
GAACCATCAAGTTCTGGAACACGTCGACGGGTTCCTTGATCAAAGAAGTC
GACACAGGCAGTCAGGTCTGTAATTTGGCGTGGTCGAAGAATTCAGATGA
GATCATCAGCACGCACGGCTACAGCCAGAACCAAATCGTCATCTGGAAGT
ACCCTCGTATGGAGCAGATTGTCTCTCTAACCGGCCATACATTCCGAGTA
CTGTACTTGGCCATGAGTCCTGATGGCCAAACAGTTGTCACCGGGGCTGG
AGATGAGACCCTGCGGTTCTGGAAGATCTTCAATAAACGACCGGGCAGAG
AGCACGGGCGTGAAGGTAGCAAGCTAGCAGAATGGGGTACCATACGCTGA
TGAACTGTTTGGGAATACTGTTCCACAGGCCGATTTGGATTCCCTATCAC
CGGACCCGTTGTTGGGTATGGGTAATGGCATTAACGACAAGACCCGCTCA
CATACGCCACCTTCACATGTAGTCTCGAACCTACCACCTGCCAGCATAAC
ACCATCGACGCCCCACAAAAACCTTTTCAACTACGCTTCCCCACGTGCTG
GCTCAGCTCACCCCACACCTTCAAAGACTCCGCGAAGTCAGCACGGTCCG
AACCTCAATGTCCGTTCAGAGCTCTATAGTCTATCACCAATCCGCCTCGA
CAGCCAACGTATTCTGGAGACGCCCCGGAAACAGCCTCGCTATGTGAACA
AGGTACCCTACAAGGTCCTTGATGCGCCCGATCTGCAAGATGATTTCTAT
CTCAACTTAGTCGATTGGGGCAGCAGCAACGTTCTTGGAGTGGGCCTAGG
AAACTCGGTGTACATGTGGAACTCCCAGACAGGCCGCGTGACGAAACTCT
GTGAGCTACGAGATGATACAGTCACAAGTGTTAGCTGGATACAAAGGGTT
TATTCCCAATCGTGAGGGCCAAGACCTTCAAGCAACGTTCAGCTTGCTTC
ATGAGGACGGCTGCCCTTCGACACCGTCAAAGTCGAAAAAGCGTGCTCCA
CATTCGGAGCTTCACTTTCAAAAGAGTGAGTCGCATCTGCCATGGGCGAC
CCCAAGAAATCAGATCGGCCGACCACCCGCAATGCTGCTGCAGGCGCACC
AGCCGTCAAGTCGCCGGATCGTACCGGTCCAAATGCGTTGACGATCGCAT
CACCTCCTGGCTCCAGGACGCCCCCTAGTATGCCGTCGAAGAAGACCTTA
TTTTACCCGGAGCCGCAAGGCAGGCGCCAGAATTCTCGAACTACCTCTGG
GCCAATCGATCCAGACGCCCTTGCGAAGGCTCTGAAGGATTTTGAGGATG
CTGGGCGTCCCCGCGAGAGAACACCGGGTACCAGTCCCAGCAGGAAGAGG
CAGAGAGTGTACGGTGATAGGGAACACATCTTTCAATAGGCACAGGCAAG
GGTCTTGTACAAATATGGGATGCTGAGCGCTGTCGGCGTCTCCGTACGAT
GATTGGACATACGAATCGTGTAGGAGCGTTGGCTTGGAACGATCATATCC
TCACGTCCGGCTCTCGAGACCGACTGATCTTCCATCGAGACGTCCGGTCC
CCGGATCAATACCTGCGTCGCTTATCTGGTCATAAGCAAGAGGTATGTGG
TCTCCGTTGGAACACAGAAGATGGTCAATTAGCCTCTGGCGGGAACGACA
ACAAACTGCTGGTCTGGGACAAGCTCAACGAAACACCGCTTTACCGCTTT
TCCGACCATACTGCGGCCGTCAAGGCAATCACTTGGTCTCCACACCAGCA
TCACCTCCTCGCATCTGGTGGTGGTACAGCTGATCGAACCATCAAGTTCT
GGAACACGTCGACGGGTTCCTTGATCAAAGAAGTCGACACAGGCAGTCAG
GTCTGTAATTTGGCGTGGTCGAAGAATTCAGATGAGATCATCAGCACGCA
CGGCTACAGCCAGAACCAAATCGTCATCTGGAAGTACCCTCGTATGGAGC
AGATTGTCTCTCTAACCGGCCATACATTCCGAGTACTGTACTTGGCCATG
AGTCCTGATGGCCAAACAGTTGTCACCGGGGCTGGAGATGAGACCCTGCG
GTTCTGGAAGATCTTCAATAAACGACCGGGCAGAGAGCACGGGCGTGAAG
GTAGCAAGCTAGCAGAATGGGGTACCATACGCTGATGAACTGTTTGGGAA
TACTGTTCCACAGGCCGATTTGGATTCCCTATCACCGGACCCGTTGTTGG
GTATGGGTAATGGCATTAACGACAAGACCCGCTCACATACGCCACCTTCA
CATGTAGTCTCGAACCTACCACCTGCCAGCATAACACCATCGACGCCCCA
CAAAAACCTTTTCAACTACGCTTCCCCACGTGCTGGCTCAGCTCACCCCA
CACCTTCAAAGACTCCGCGAAGTCAGCACGGTCCGAACCTCAATGTCCGT
TCAGAGCTCTATAGTCTATCACCAATCCGCCTCGACAGCCAACGTATTCT
GGAGACGCCCCGGAAACAGCCTCGCTATGTGAACAAGGTACCCTACAAGG
TCCTTGATGCGCCCGATCTGCAAGATGATTTCTATCTCAACTTAGTCGAT
TGGGGCAGCAGCAACGTTCTTGGAGTGGGCCTAGGAAACTCGGTGTACAT
GTGGAACTCCCAGACAGGCCGCGTGACGAAACTCTGTGAGCTACGAGATG
ATACAGTCACAAGTGTTAGCTGGATACAAAGGGTTTATTCCCAATCGTGA
GGGCCAAGACCTTCAAGCAACGTTCAGCTTGCTTCATGAGGACGGCTGCC
CTTCGACACCGTCAAAGTCGAAAAAGCGTGCTCCACATTCGGAGCTTCAC
TTTCAAAAGAGTGAGTCGCATCTGCCATGGGCGACCCCAAGAAATCAGAT
CGGCCGACCACCCGCAATGCTGCTGCAGGCGCACCAGCCGTCAAGTCGCC
GGATCGTACCGGTCCAAATGCGTTGACGATCGCATCACCTCCTGGCTCCA
GGACGCCCCCTAGTATGCCGTCGAAGAAGACCTTATTTTACCCGGAGCCG
CAAGGCAGGCGCCAGAATTCTCGAACTACCTCTGGGCCAATCGATCCAGA
CGCCCTTGCGAAGGCTCTGAAGGATTTTGAGGATGCTGGGCGTCCCCGCG
AGAGAACACCGGGTACCAGTCCCAGCAGGAAGAGGCAGAGAGTGTACGGT
GATAGGGAACACATCTTTCAATAGGCACAGGCAAGGGTCTTGTACAAATA
TGGGATGCTGAGCGCTGTCGGCGTCTCCGTACGATGATTGGACATACGAA
TCGTGTAGGAGCGTTGGCTTGGAACGATCATATCCTCACGTCCGGCTCTC
GAGACCGACTGATCTTCCATCGAGACGTCCGGTCCCCGGATCAATACCTG
CGTCGCTTATCTGGTCATAAGCAAGAGGTATGTGGTCTCCGTTGGAACAC
AGAAGATGGTCAATTAGCCTCTGGCGGGAACGACAACAAACTGCTGGTCT
GGGACAAGCTCAACGAAACACCGCTTTACCGCTTTTCCGACCATACTGCG
GCCGTCAAGGCAATCACTTGGTCTCCACACCAGCATCACCTCCTCGCATC
TGGTGGTGGTACAGCTGATCGAACCATCAAGTTCTGGAACACGTCGACGG
GTTCCTTGATCAAAGAAGTCGACACAGGCAGTCAGGTCTGTAATTTGGCG
TGGTCGAAGAATTCAGATGAGATCATCAGCACGCACGGCTACAGCCAGAA
CCAAATCGTCATCTGGAAGTACCCTCGTATGGAGCAGATTGTCTCTCTAA
CCGGCCATACATTCCGAGTACTGTACTTGGCCATGAGTCCTGATGGCCAA
ACAGTTGTCACCGGGGCTGGAGATGAGACCCTGCGGTTCTGGAAGATCTT
CAATAAACGACCGGGCAGAGAGCACGGGCGTGAAGGTAGCAAGCTAGCAG
AATGGGGTACCATACGCTGATGAACTGTTTGGGAATACTGTTCCACAGGC
CGATTTGGATTCCCTATCACCGGACCCGTTGTTGGGTATGGGTAATGGCA
TTAACGACAAGACCCGCTCACATACGCCACCTTCACATGTAGTCTCGAAC
CTACCACCTGCCAGCATAACACCATCGACGCCCCACAAAAACCTTTTCAA
CTACGCTTCCCCACGTGCTGGCTCAGCTCACCCCACACCTTCAAAGACTC
CGCGAAGTCAGCACGGTCCGAACCTCAATGTCCGTTCAGAGCTCTATAGT
CTATCACCAATCCGCCTCGACAGCCAACGTATTCTGGAGACGCCCCGGAA
ACAGCCTCGCTATGTGAACAAGGTACCCTACAAGGTCCTTGATGCGCCCG
ATCTGCAAGATGATTTCTATCTCAACTTAGTCGATTGGGGCAGCAGCAAC
GTTCTTGGAGTGGGCCTAGGAAACTCGGTGTACATGTGGAACTCCCAGAC
AGGCCGCGTGACGAAACTCTGTGAGCTACGAGATGATACAGTCACAAGTG
TTAGCTGGATACAAAGGGTTTATTCCCAATCGTGAGGGCCAAGACCTTCA
AGCAACGTTCAGCTTGCTTCATGAGGACGGCTGCCCTTCGACACCGTCAA
AGTCGAAAAAGCGTGCTCCACATTCGGAGCTTCACTTTCAAAAGAGTGAG
TCGCATCTGCCATGGGCGACCCCAAGAAATCAGATCGGCCGACCACCCGC
AATGCTGCTGCAGGCGCACCAGCCGTCAAGTCGCCGGATCGTACCGGTCC
AAATGCGTTGACGATCGCATCACCTCCTGGCTCCAGGACGCCCCCTAGTA
TGCCGTCGAAGAAGACCTTATTTTACCCGGAGCCGCAAGGCAGGCGCCAG
AATTCTCGAACTACCTCTGGGCCAATCGATCCAGACGCCCTTGCGAAGGC
TCTGAAGGATTTTGAGGATGCTGGGCGTCCCCGCGAGAGAACACCGGGTA
CCAGTCCCAGCAGGAAGAGGCAGAGAGTGTACGGTGATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036322 |
| DBxref | InterPro:IPR017986 |
| DBxref | InterPro:IPR019775 |
| DBxref | InterPro:IPR015943 |
| DBxref | InterPro:IPR001680 |
| DBxref | PFAM:PF00400 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An02 | supercontig | An02:2912457..2914482 - |
|
