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Sequences
The following sequences are available for this feature:
mRNA from alignment at An02:2937564..2938114+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_002176-T1 ID=CBS51388_002176-T1|Name=CBS51388_002176-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=551bp|location=Sequence derived from alignment at An02:2937564..2938114+ (Aspergillus niger CBS 513.88)
ATGGCCACTCGTCGCTCCGCACCGAAATCTCCGTCTCCCAAGGATGTTGT
CGCGTCTTCGGGCTCTCCAAAGCCCTCTGACTCAGATGTGACCCCTGCCG
TTCCCACGTAGGTGCATCTCATTCGTCCCCTACCAACGAACACTAGGCCA
CATGGCGGCTATCCTGAACTACCGGGTTCAGCCCAACGAACGCATACACC
TTATCAATACATATCACGCACATACGCCCCCTCCCTAACTCTGACTAACA
CATCACTTCCAGAAATGTAATCATGAAACTTCTCGGATTCTCCGTCGCCA
TGGTCGTCATTCCTATCGGAATGTACTTTGTTACAGTGGACTTTGGAGGT
GAGAATCTCATCCAAACAACCCCCCATTACTAATGTTCTTATATTAAATG
ACACATCTGAGCAGCAAGCGCCACAGTCGGCGGTATCGTGGCTGCCATCA
TGGCGAACGTAGTTCTCTTCGCGTACATCTATGTTGCGTGGAAGGATGAT
CAGGCGGAGAGGGAAGCTGACGCTAAGTACAAGGAGAAAAAAGCACAGTG
A back to topCoding sequence (CDS) from alignment at An02:2937564..2938114+ >CBS51388_002176-T1 ID=CBS51388_002176-T1|Name=CBS51388_002176-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=990bp|location=Sequence derived from alignment at An02:2937564..2938114+ (Aspergillus niger CBS 513.88)
ATGGCCACTCGTCGCTCCGCACCGAAATCTCCGTCTCCCAAGGATGTTGT
CGCGTCTTCGGGCTCTCCAAAGCCCTCTGACTCAGATGTGACCCCTGCCG
TTCCCACAAATGTAATCATGAAACTTCTCGGATTCTCCGTCGCCATGGTC
GTCATTCCTATCGGAATGTACTTTGTTACAGTGGACTTTGGAGCAAGCGC
CACAGTCGGCGGTATCGTGGCTGCCATCATGGCGAACGTAGTTCTCTTCG
CGTACATCTATGTTGCGTGGAAGGATGATCAGGCGGAGAGGGAAGCTGAC
GCTAAGTACAAGGAGAAAAAAGCACAGTGAATGGCCACTCGTCGCTCCGC
ACCGAAATCTCCGTCTCCCAAGGATGTTGTCGCGTCTTCGGGCTCTCCAA
AGCCCTCTGACTCAGATGTGACCCCTGCCGTTCCCACAAATGTAATCATG
AAACTTCTCGGATTCTCCGTCGCCATGGTCGTCATTCCTATCGGAATGTA
CTTTGTTACAGTGGACTTTGGAGCAAGCGCCACAGTCGGCGGTATCGTGG
CTGCCATCATGGCGAACGTAGTTCTCTTCGCGTACATCTATGTTGCGTGG
AAGGATGATCAGGCGGAGAGGGAAGCTGACGCTAAGTACAAGGAGAAAAA
AGCACAGTGAATGGCCACTCGTCGCTCCGCACCGAAATCTCCGTCTCCCA
AGGATGTTGTCGCGTCTTCGGGCTCTCCAAAGCCCTCTGACTCAGATGTG
ACCCCTGCCGTTCCCACAAATGTAATCATGAAACTTCTCGGATTCTCCGT
CGCCATGGTCGTCATTCCTATCGGAATGTACTTTGTTACAGTGGACTTTG
GAGCAAGCGCCACAGTCGGCGGTATCGTGGCTGCCATCATGGCGAACGTA
GTTCTCTTCGCGTACATCTATGTTGCGTGGAAGGATGATCAGGCGGAGAG
GGAAGCTGACGCTAAGTACAAGGAGAAAAAAGCACAGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0070072 | vacuolar proton-transporting V-type ATPase complex assembly |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR019013 |
| DBxref | PFAM:PF09446 |
| Product | vacuolar ATPase assembly integral membrane protein vma21 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An02 | supercontig | An02:2937564..2938114 + |
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