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Sequences
The following sequences are available for this feature:
mRNA from alignment at An03:503871..505246- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_002603-T1 ID=CBS51388_002603-T1|Name=CBS51388_002603-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1376bp|location=Sequence derived from alignment at An03:503871..505246- (Aspergillus niger CBS 513.88)
ATGACTGACCCTCCTCAGACTATCCCTCTTCACCACCTTCCCTCATCCAT
CTCCTACAATGCCGCCACCACCACAGCCCTGGAATCTCACCTCAGCACAT
CTGACGAGGAGTCTAGCCCGCCTCCGCGTTACACCCGCGAGAATGACCCC
TTCCAACTAGCCTCGAAGCTGAAAAGTCCCGAAGAAATCGCCCAGATGCA
ACCCCAAGCCAACATCTCCCGCAAACGTCACACCTCCGGCTGCCTCCCGC
ACAACGCCAACCCCCGCAATGCGCTCGCTTCCTCCCTAGCCTCCAAACAA
CTTCAAACGTTCTACGAATCCCAGAATGAGAACATCCAACGCATGCTCAA
GCCCGTCGAAGAACACGTCCGCGATGCCCGTGAAACAAACAGCAGCAACC
AACTCAAGTACAAAATCGCCGTCTGGGGCTCTTTCGCCGCCAATGTCATC
CTCTGCGTTCTTCAACTCTACGGGGCCATTTCCTCCAGCTCACTGTCCTT
GTACACAACCATGGCCGACGCCGTCTTTGATCCTCTCTCCAATATCACTC
TCCTCGTCTCCAACAAGGCCGTCAATCGCGTCGACCCTCGTAAATTCCCC
GCCGGAAAAGCTCGTATCGAAACAGCCGGCAACATCTGCTTCTGTTTTCT
CATGACGGCTGTCTCTTTCATCCTCATTGCTTTCTCTGTCCGCGAACTCG
CCGAAGGATCCAACTCCGAGACGGGATCTTTCCACCTCCCCTCCGTTGTC
GCCGTCATCGTCGCCTTTTGTACTAAATTCGTGCTTTTCCTGTACTGCTT
CGCGCTGAAGGATCAGTATTCCCAGGTCATGATCCTTTGGGAAGACCACC
GCAATGACCTCCTTATCAACGGATTCGGTATCCTTACCAGCGTAGGTGGA
GGTAAACTGCGCTGGTGGATTGACCCCGCGGGAGCTATCGTCCTCTCCGT
GCTTGTCAGTTGTTTGTGGCTGTTCAGCGCGTATCGCGAGTTCCAGTTGC
TTATCGGTGTTACGGCCGATACGAAGATGCAACAGTTGATTACATATATC
TGTGAGCTTATCCCCCTCTCTTATCTCCTTTCCACTCCCGCCTATAGATG
AAAGATAAAAGCTAATAACGTGTTAATCGTAAAGCAATGACCCACTCCCC
CCTCATCACCGCCATCGATACCGTCCGTGCATACACCTCCGGTCCTCGAT
TGCTTGTGGAAGTGGACATCGTCATGGACCCGAACGATTCGCTGCGGGCT
ACGCATGATGTCGCGGAGGAATTGCAGATGAAGTTGGAGTCTTTGCCAGA
CGTGGAGCGTGCGTATGTGCATGTGGATTATGAGACCACGCATAAGCCGG
AGCACTTCTTGAAGAAGGAGTTGTAG back to topCoding sequence (CDS) from alignment at An03:503871..505246- >CBS51388_002603-T1 ID=CBS51388_002603-T1|Name=CBS51388_002603-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2586bp|location=Sequence derived from alignment at An03:503871..505246- (Aspergillus niger CBS 513.88)
CAATGACCCACTCCCCCCTCATCACCGCCATCGATACCGTCCGTGCATAC
ACCTCCGGTCCTCGATTGCTTGTGGAAGTGGACATCGTCATGGACCCGAA
CGATTCGCTGCGGGCTACGCATGATGTCGCGGAGGAATTGCAGATGAAGT
TGGAGTCTTTGCCAGACGTGGAGCGTGCGTATGTGCATGTGGATTATGAG
ACCACGCATAAGCCGGAGCACTTCTTGAAGAAGGAGTTGTAGATGACTGA
CCCTCCTCAGACTATCCCTCTTCACCACCTTCCCTCATCCATCTCCTACA
ATGCCGCCACCACCACAGCCCTGGAATCTCACCTCAGCACATCTGACGAG
GAGTCTAGCCCGCCTCCGCGTTACACCCGCGAGAATGACCCCTTCCAACT
AGCCTCGAAGCTGAAAAGTCCCGAAGAAATCGCCCAGATGCAACCCCAAG
CCAACATCTCCCGCAAACGTCACACCTCCGGCTGCCTCCCGCACAACGCC
AACCCCCGCAATGCGCTCGCTTCCTCCCTAGCCTCCAAACAACTTCAAAC
GTTCTACGAATCCCAGAATGAGAACATCCAACGCATGCTCAAGCCCGTCG
AAGAACACGTCCGCGATGCCCGTGAAACAAACAGCAGCAACCAACTCAAG
TACAAAATCGCCGTCTGGGGCTCTTTCGCCGCCAATGTCATCCTCTGCGT
TCTTCAACTCTACGGGGCCATTTCCTCCAGCTCACTGTCCTTGTACACAA
CCATGGCCGACGCCGTCTTTGATCCTCTCTCCAATATCACTCTCCTCGTC
TCCAACAAGGCCGTCAATCGCGTCGACCCTCGTAAATTCCCCGCCGGAAA
AGCTCGTATCGAAACAGCCGGCAACATCTGCTTCTGTTTTCTCATGACGG
CTGTCTCTTTCATCCTCATTGCTTTCTCTGTCCGCGAACTCGCCGAAGGA
TCCAACTCCGAGACGGGATCTTTCCACCTCCCCTCCGTTGTCGCCGTCAT
CGTCGCCTTTTGTACTAAATTCGTGCTTTTCCTGTACTGCTTCGCGCTGA
AGGATCAGTATTCCCAGGTCATGATCCTTTGGGAAGACCACCGCAATGAC
CTCCTTATCAACGGATTCGGTATCCTTACCAGCGTAGGTGGAGGTAAACT
GCGCTGGTGGATTGACCCCGCGGGAGCTATCGTCCTCTCCGTGCTTGTCA
GTTGTTTGTGGCTGTTCAGCGCGTATCGCGAGTTCCAGTTGCTTATCGGT
GTTACGGCCGATACGAAGATGCAACAGTTGATTACATATATCTCAATGAC
CCACTCCCCCCTCATCACCGCCATCGATACCGTCCGTGCATACACCTCCG
GTCCTCGATTGCTTGTGGAAGTGGACATCGTCATGGACCCGAACGATTCG
CTGCGGGCTACGCATGATGTCGCGGAGGAATTGCAGATGAAGTTGGAGTC
TTTGCCAGACGTGGAGCGTGCGTATGTGCATGTGGATTATGAGACCACGC
ATAAGCCGGAGCACTTCTTGAAGAAGGAGTTGTAGATGACTGACCCTCCT
CAGACTATCCCTCTTCACCACCTTCCCTCATCCATCTCCTACAATGCCGC
CACCACCACAGCCCTGGAATCTCACCTCAGCACATCTGACGAGGAGTCTA
GCCCGCCTCCGCGTTACACCCGCGAGAATGACCCCTTCCAACTAGCCTCG
AAGCTGAAAAGTCCCGAAGAAATCGCCCAGATGCAACCCCAAGCCAACAT
CTCCCGCAAACGTCACACCTCCGGCTGCCTCCCGCACAACGCCAACCCCC
GCAATGCGCTCGCTTCCTCCCTAGCCTCCAAACAACTTCAAACGTTCTAC
GAATCCCAGAATGAGAACATCCAACGCATGCTCAAGCCCGTCGAAGAACA
CGTCCGCGATGCCCGTGAAACAAACAGCAGCAACCAACTCAAGTACAAAA
TCGCCGTCTGGGGCTCTTTCGCCGCCAATGTCATCCTCTGCGTTCTTCAA
CTCTACGGGGCCATTTCCTCCAGCTCACTGTCCTTGTACACAACCATGGC
CGACGCCGTCTTTGATCCTCTCTCCAATATCACTCTCCTCGTCTCCAACA
AGGCCGTCAATCGCGTCGACCCTCGTAAATTCCCCGCCGGAAAAGCTCGT
ATCGAAACAGCCGGCAACATCTGCTTCTGTTTTCTCATGACGGCTGTCTC
TTTCATCCTCATTGCTTTCTCTGTCCGCGAACTCGCCGAAGGATCCAACT
CCGAGACGGGATCTTTCCACCTCCCCTCCGTTGTCGCCGTCATCGTCGCC
TTTTGTACTAAATTCGTGCTTTTCCTGTACTGCTTCGCGCTGAAGGATCA
GTATTCCCAGGTCATGATCCTTTGGGAAGACCACCGCAATGACCTCCTTA
TCAACGGATTCGGTATCCTTACCAGCGTAGGTGGAGGTAAACTGCGCTGG
TGGATTGACCCCGCGGGAGCTATCGTCCTCTCCGTGCTTGTCAGTTGTTT
GTGGCTGTTCAGCGCGTATCGCGAGTTCCAGTTGCTTATCGGTGTTACGG
CCGATACGAAGATGCAACAGTTGATTACATATATCT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
| GO:0006812 | cation transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008324 | cation transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR002524 |
| DBxref | InterPro:IPR027469 |
| DBxref | InterPro:IPR036837 |
| DBxref | InterPro:IPR027470 |
| DBxref | PFAM:PF16916 |
| DBxref | PFAM:PF01545 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An03 | supercontig | An03:503871..505246 - |
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