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Sequences
The following sequences are available for this feature:
mRNA from alignment at An08:2151182..2152780- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_005651-T1 ID=CBS51388_005651-T1|Name=CBS51388_005651-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1599bp|location=Sequence derived from alignment at An08:2151182..2152780- (Aspergillus niger CBS 513.88)
ATGGCCACCTCATCTATCATCACGCGCGGCTCCAGCTCCCTGGCCAATTT
CACGGTCCGCTCCCGCCCAAAAGTTGATATTATTCTCGCCAATCAAACGG
ATGGTCTGGTCCCTTCATTCACCACCGGCGATACCATCAAAGGCACGGTT
ACCATCACGGTCGATCATGACACTCGCTTTGATGACCTAGAGATCACATT
TGAGGGTATGTTGGCTCGCACAATACCAGAAGGTTACCAGGAATAGTCTT
ACTTACTGACTGGGTCAGGAACATCGAGGACCTCGGTGGAGCGCCAATCG
ATGCCCGGCCGCACTGGGGCTTACCATACATTCCTCCGACTGCGACAGCC
CATCGATGAGACCGCATATCCCACCCCCCGGGTACTTGAACCCGGGCGCA
ACTACGAATTCCCCTTCACCTTTGTCGTGCCCGAGCGTCTACTGCCTCAT
ATCTGTAACCACGCCAAAACCAATCTGCATGTCGAACAATCGCACACGCT
GCTGCCACCCACGTTTGGTGATCCCATGATTGCCAGCAACCGCAAATCGG
TCATCGATGACATGGCCCCCGAAATGTGCCGCATCTCCTATCTAGTTCGT
GTGACTCTCCAGAAAAAGCCCATGGCCCAGAACGCCTCGCCGGTTACGCT
AGTGTCTGTTGGGAAAAAGGTGCGGGTCATTCCTGCGGTCGATGAGGAGC
CACCCCTTAACGTGGAAGACAACGATGACTTGTACAGCGTCCGCAAAGAA
AAGGATGTGAAACGTGGTTTGATGAGGGGAAAGCTGGGCCGATTGGTGGT
GGCCGCTGCACAGCCCAAGCCAGTGCGGTTGAGTCCATCCGACACCGGGA
ACTGCGATTCTGTGAGTACCGTTGCCACTATGCAGCTGCGCTTCGATCCG
GTGGGCGACGAGCAGCCCCCTCGCCTAGGCACCGTATGGAGCAAACTTCG
AGTGTCAACATTCTACAGCTCCGATCCTTGGGGAGATTATCCGTCTGCTA
CATGTATCAAATCCTGGGCGCAGATGGGGCGGGCCATGTACACCGAAACT
GTACCACTGTCCACCATGTGTGTTGCATCGGCACAATGGACAAAGCACAC
CGACGCCGATCTCGAACGCCGTGACTCCATGCACTCGACTTCGTCTACTG
AATCTCTTCCCGGCCCATCTGCCTCGTTCGCCGGAAACACCTACTATACC
GCGTCGGTTGTTGTTCCAATCACCCTCCCCAAAGCCAAGTCATTCGTGCC
GACGTTCTATTCCTGTTTGATCGCGCGCGCCTACGCCCTGGAGCTCAGCA
TTTCCTATCACGCCGCTAATTCCAGGATCCTGACTCCCACCACATCCTTG
AAGGTCCCACTGCAGCTGACTTGCGAGGCACAGCCAGGCGTCGGATCTAA
GGGCACCGTGGTCGACATTTCCCAGGATGAAGTGAACTCCCAATTTTTCA
GCCCTCGCAGCATTGCGCCCCCATCTGTCTCCGAGCTCGTCCCTATTGCA
CCACCCGAGTATACATCTGTCCAGGTCTCCAACCTGTCTCCTGACCGCTC
GAGAATGTTACCACCATCGGTGACCAATTCGGGCAGTGTTAGAGTTTAG back to topCoding sequence (CDS) from alignment at An08:2151182..2152780- >CBS51388_005651-T1 ID=CBS51388_005651-T1|Name=CBS51388_005651-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3072bp|location=Sequence derived from alignment at An08:2151182..2152780- (Aspergillus niger CBS 513.88)
GAACATCGAGGACCTCGGTGGAGCGCCAATCGATGCCCGGCCGCACTGGG
GCTTACCATACATTCCTCCGACTGCGACAGCCCATCGATGAGACCGCATA
TCCCACCCCCCGGGTACTTGAACCCGGGCGCAACTACGAATTCCCCTTCA
CCTTTGTCGTGCCCGAGCGTCTACTGCCTCATATCTGTAACCACGCCAAA
ACCAATCTGCATGTCGAACAATCGCACACGCTGCTGCCACCCACGTTTGG
TGATCCCATGATTGCCAGCAACCGCAAATCGGTCATCGATGACATGGCCC
CCGAAATGTGCCGCATCTCCTATCTAGTTCGTGTGACTCTCCAGAAAAAG
CCCATGGCCCAGAACGCCTCGCCGGTTACGCTAGTGTCTGTTGGGAAAAA
GGTGCGGGTCATTCCTGCGGTCGATGAGGAGCCACCCCTTAACGTGGAAG
ACAACGATGACTTGTACAGCGTCCGCAAAGAAAAGGATGTGAAACGTGGT
TTGATGAGGGGAAAGCTGGGCCGATTGGTGGTGGCCGCTGCACAGCCCAA
GCCAGTGCGGTTGAGTCCATCCGACACCGGGAACTGCGATTCTGTGAGTA
CCGTTGCCACTATGCAGCTGCGCTTCGATCCGGTGGGCGACGAGCAGCCC
CCTCGCCTAGGCACCGTATGGAGCAAACTTCGAGTGTCAACATTCTACAG
CTCCGATCCTTGGGGAGATTATCCGTCTGCTACATGTATCAAATCCTGGG
CGCAGATGGGGCGGGCCATGTACACCGAAACTGTACCACTGTCCACCATG
TGTGTTGCATCGGCACAATGGACAAAGCACACCGACGCCGATCTCGAACG
CCGTGACTCCATGCACTCGACTTCGTCTACTGAATCTCTTCCCGGCCCAT
CTGCCTCGTTCGCCGGAAACACCTACTATACCGCGTCGGTTGTTGTTCCA
ATCACCCTCCCCAAAGCCAAGTCATTCGTGCCGACGTTCTATTCCTGTTT
GATCGCGCGCGCCTACGCCCTGGAGCTCAGCATTTCCTATCACGCCGCTA
ATTCCAGGATCCTGACTCCCACCACATCCTTGAAGGTCCCACTGCAGCTG
ACTTGCGAGGCACAGCCAGGCGTCGGATCTAAGGGCACCGTGGTCGACAT
TTCCCAGGATGAAGTGAACTCCCAATTTTTCAGCCCTCGCAGCATTGCGC
CCCCATCTGTCTCCGAGCTCGTCCCTATTGCACCACCCGAGTATACATCT
GTCCAGGTCTCCAACCTGTCTCCTGACCGCTCGAGAATGTTACCACCATC
GGTGACCAATTCGGGCAGTGTTAGAGTTTAGATGGCCACCTCATCTATCA
TCACGCGCGGCTCCAGCTCCCTGGCCAATTTCACGGTCCGCTCCCGCCCA
AAAGTTGATATTATTCTCGCCAATCAAACGGATGGTCTGGTCCCTTCATT
CACCACCGGCGATACCATCAAAGGCACGGTTACCATCACGGTCGATCATG
ACACTCGCTTTGATGACCTAGAGATCACATTTGAGGGAACATCGAGGACC
TCGGTGGAGCGCCAATCGATGCCCGGCCGCACTGGGGCTTACCATACATT
CCTCCGACTGCGACAGCCCATCGATGAGACCGCATATCCCACCCCCCGGG
TACTTGAACCCGGGCGCAACTACGAATTCCCCTTCACCTTTGTCGTGCCC
GAGCGTCTACTGCCTCATATCTGTAACCACGCCAAAACCAATCTGCATGT
CGAACAATCGCACACGCTGCTGCCACCCACGTTTGGTGATCCCATGATTG
CCAGCAACCGCAAATCGGTCATCGATGACATGGCCCCCGAAATGTGCCGC
ATCTCCTATCTAGTTCGTGTGACTCTCCAGAAAAAGCCCATGGCCCAGAA
CGCCTCGCCGGTTACGCTAGTGTCTGTTGGGAAAAAGGTGCGGGTCATTC
CTGCGGTCGATGAGGAGCCACCCCTTAACGTGGAAGACAACGATGACTTG
TACAGCGTCCGCAAAGAAAAGGATGTGAAACGTGGTTTGATGAGGGGAAA
GCTGGGCCGATTGGTGGTGGCCGCTGCACAGCCCAAGCCAGTGCGGTTGA
GTCCATCCGACACCGGGAACTGCGATTCTGTGAGTACCGTTGCCACTATG
CAGCTGCGCTTCGATCCGGTGGGCGACGAGCAGCCCCCTCGCCTAGGCAC
CGTATGGAGCAAACTTCGAGTGTCAACATTCTACAGCTCCGATCCTTGGG
GAGATTATCCGTCTGCTACATGTATCAAATCCTGGGCGCAGATGGGGCGG
GCCATGTACACCGAAACTGTACCACTGTCCACCATGTGTGTTGCATCGGC
ACAATGGACAAAGCACACCGACGCCGATCTCGAACGCCGTGACTCCATGC
ACTCGACTTCGTCTACTGAATCTCTTCCCGGCCCATCTGCCTCGTTCGCC
GGAAACACCTACTATACCGCGTCGGTTGTTGTTCCAATCACCCTCCCCAA
AGCCAAGTCATTCGTGCCGACGTTCTATTCCTGTTTGATCGCGCGCGCCT
ACGCCCTGGAGCTCAGCATTTCCTATCACGCCGCTAATTCCAGGATCCTG
ACTCCCACCACATCCTTGAAGGTCCCACTGCAGCTGACTTGCGAGGCACA
GCCAGGCGTCGGATCTAAGGGCACCGTGGTCGACATTTCCCAGGATGAAG
TGAACTCCCAATTTTTCAGCCCTCGCAGCATTGCGCCCCCATCTGTCTCC
GAGCTCGTCCCTATTGCACCACCCGAGTATACATCTGTCCAGGTCTCCAA
CCTGTCTCCTGACCGCTCGAGAATGTTACCACCATCGGTGACCAATTCGG
GCAGTGTTAGAGTTTAGATGGCCACCTCATCTATCATCACGCGCGGCTCC
AGCTCCCTGGCCAATTTCACGGTCCGCTCCCGCCCAAAAGTTGATATTAT
TCTCGCCAATCAAACGGATGGTCTGGTCCCTTCATTCACCACCGGCGATA
CCATCAAAGGCACGGTTACCATCACGGTCGATCATGACACTCGCTTTGAT
GACCTAGAGATCACATTTGAGG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR014752 |
| DBxref | InterPro:IPR011021 |
| DBxref | PFAM:PF00339 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An08 | supercontig | An08:2151182..2152780 - |
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