You are here

Home

CBS51388_006578-T1, CBS51388_006578-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_006578-T1
Unique NameCBS51388_006578-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An11:214890..216350-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_006578-T1 ID=CBS51388_006578-T1|Name=CBS51388_006578-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1461bp|location=Sequence derived from alignment at An11:214890..216350- (Aspergillus niger CBS 513.88)
ATGAACAACAGGCCTGTCGAACAAGCGCTGGCCACGCTACTGCCTACACA
CGCTCAAGACCTCCCACAAGAACTTCTTAGTCTCGCCATATCACTCGTCG
CCCAATCGCGCAGCTTCTCCAGCAGTCTCAAGCCCGAAGAAGAGATCGCT
CGGCCGTATGCGTGCGCTGAAATCGCTTGCAAAAGGTGTGTAGAACGCCA
TTCTTGACAAACCAGAACCTGGTCAACATGGATGATTCTAACCATTCCTC
ACGATGATAGATTAACTCGCGCTCTCAAACTCCCTCCTCTCCTTGGCCAC
CCGCCATGTCCTCCCCGCGCCTACAAAAACCTCTACGCCTTCCTTGACCG
ATCCCTATCCACTGGAATTTCCCGCGCAAGTGCCTCAGCCCCAGGGACAC
CGTCTCGCGCTGGATCAGCACCATCAACACCGAGAAAGGGCACACAAAGG
ACTCCGTCAAAGACTGCCGCAACTGCTACTCCGCGAGGGCTACAACAACA
ACAACAACACCACCAACAGAACACACCTACGAAATCCACCCCTCTCAAGC
GCGCTCTCTCACACACCGACAACGACAAGCCCTCGCCATCACCTCGACCC
CAGAAAATCCCCAAATTCCGCGCGAATGGCCTCTCCGGCTCAACTATCAT
CCCCGACGCCCCTAGCTGGGTGATGACTTCCATCCGAACAGTTTGCAAGA
CGCTTTCGACGCCCGCACCGCGCATGAGCACGTGGTCTCGGCCGCCTATC
TCACGGACTCTCCCGCCACATATCTTCGCCGGTGTATCTTCCATTCTGTA
TATGATTTCCGAAGCGACGGCGAAACACGACGAAGAAATTGACGAGGAGA
TGATGGAGTTTCTGGAGCCGGTGATCACAGCCAAGGATAAAGAGAATGAT
GAAGATTTCAAGGACATTATCAATGCCTTGATTGTTGCAGTGTACTTCCT
CGTCCTTGCTCGTCGACGCCAACCGGGCCCTTCGTCAACCGGGGATAGTG
CCGAGGCAGTGGAAGCGAAGAAAATGGATAAGAAGACGTTCTCGGAGATG
CGACAGACTGCGCTGGTTAGTCTTGGGCTTCCGTCAACGGAGAGGCGGCA
TCGGGAGGATGTGGATCAGTGGATTGCGCTGGTTATGGAGCAGGGGTGGG
CTCATGGCAAGGAGTGGTTTGAGAATGTGCCGTTAGCTGGGGAGTTAGAT
GGAGATGAGAGGGATTTAGGGGATGAGCTGGCGGGTGGGGTTGTCGAGGA
GGATGGTGGTAGGGGCAGGTTGATGGTGTCTGGGAGGGGGGCATTGGTTG
CGGGCCAGTCTTCGAGGCGTGGGCTGCTTCCTGGGTTGGGGACTATGATG
CAGGATCGGGTGGATTGGTTGAGTGAGGATCGGAGGGAGGATTATCTTGA
GTGGAAGGCGGATATGGTGGCGCGGATTGAACAGATTGAGAGGACGGCTC
AGGCTGTGTAA
back to top

Coding sequence (CDS) from alignment at An11:214890..216350-

>CBS51388_006578-T1 ID=CBS51388_006578-T1|Name=CBS51388_006578-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2772bp|location=Sequence derived from alignment at An11:214890..216350- (Aspergillus niger CBS 513.88)
ATTAACTCGCGCTCTCAAACTCCCTCCTCTCCTTGGCCACCCGCCATGTC
CTCCCCGCGCCTACAAAAACCTCTACGCCTTCCTTGACCGATCCCTATCC
ACTGGAATTTCCCGCGCAAGTGCCTCAGCCCCAGGGACACCGTCTCGCGC
TGGATCAGCACCATCAACACCGAGAAAGGGCACACAAAGGACTCCGTCAA
AGACTGCCGCAACTGCTACTCCGCGAGGGCTACAACAACAACAACAACAC
CACCAACAGAACACACCTACGAAATCCACCCCTCTCAAGCGCGCTCTCTC
ACACACCGACAACGACAAGCCCTCGCCATCACCTCGACCCCAGAAAATCC
CCAAATTCCGCGCGAATGGCCTCTCCGGCTCAACTATCATCCCCGACGCC
CCTAGCTGGGTGATGACTTCCATCCGAACAGTTTGCAAGACGCTTTCGAC
GCCCGCACCGCGCATGAGCACGTGGTCTCGGCCGCCTATCTCACGGACTC
TCCCGCCACATATCTTCGCCGGTGTATCTTCCATTCTGTATATGATTTCC
GAAGCGACGGCGAAACACGACGAAGAAATTGACGAGGAGATGATGGAGTT
TCTGGAGCCGGTGATCACAGCCAAGGATAAAGAGAATGATGAAGATTTCA
AGGACATTATCAATGCCTTGATTGTTGCAGTGTACTTCCTCGTCCTTGCT
CGTCGACGCCAACCGGGCCCTTCGTCAACCGGGGATAGTGCCGAGGCAGT
GGAAGCGAAGAAAATGGATAAGAAGACGTTCTCGGAGATGCGACAGACTG
CGCTGGTTAGTCTTGGGCTTCCGTCAACGGAGAGGCGGCATCGGGAGGAT
GTGGATCAGTGGATTGCGCTGGTTATGGAGCAGGGGTGGGCTCATGGCAA
GGAGTGGTTTGAGAATGTGCCGTTAGCTGGGGAGTTAGATGGAGATGAGA
GGGATTTAGGGGATGAGCTGGCGGGTGGGGTTGTCGAGGAGGATGGTGGT
AGGGGCAGGTTGATGGTGTCTGGGAGGGGGGCATTGGTTGCGGGCCAGTC
TTCGAGGCGTGGGCTGCTTCCTGGGTTGGGGACTATGATGCAGGATCGGG
TGGATTGGTTGAGTGAGGATCGGAGGGAGGATTATCTTGAGTGGAAGGCG
GATATGGTGGCGCGGATTGAACAGATTGAGAGGACGGCTCAGGCTGTGTA
AATGAACAACAGGCCTGTCGAACAAGCGCTGGCCACGCTACTGCCTACAC
ACGCTCAAGACCTCCCACAAGAACTTCTTAGTCTCGCCATATCACTCGTC
GCCCAATCGCGCAGCTTCTCCAGCAGTCTCAAGCCCGAAGAAGAGATCGC
TCGGCCGTATGCGTGCGCTGAAATCGCTTGCAAAAGATTAACTCGCGCTC
TCAAACTCCCTCCTCTCCTTGGCCACCCGCCATGTCCTCCCCGCGCCTAC
AAAAACCTCTACGCCTTCCTTGACCGATCCCTATCCACTGGAATTTCCCG
CGCAAGTGCCTCAGCCCCAGGGACACCGTCTCGCGCTGGATCAGCACCAT
CAACACCGAGAAAGGGCACACAAAGGACTCCGTCAAAGACTGCCGCAACT
GCTACTCCGCGAGGGCTACAACAACAACAACAACACCACCAACAGAACAC
ACCTACGAAATCCACCCCTCTCAAGCGCGCTCTCTCACACACCGACAACG
ACAAGCCCTCGCCATCACCTCGACCCCAGAAAATCCCCAAATTCCGCGCG
AATGGCCTCTCCGGCTCAACTATCATCCCCGACGCCCCTAGCTGGGTGAT
GACTTCCATCCGAACAGTTTGCAAGACGCTTTCGACGCCCGCACCGCGCA
TGAGCACGTGGTCTCGGCCGCCTATCTCACGGACTCTCCCGCCACATATC
TTCGCCGGTGTATCTTCCATTCTGTATATGATTTCCGAAGCGACGGCGAA
ACACGACGAAGAAATTGACGAGGAGATGATGGAGTTTCTGGAGCCGGTGA
TCACAGCCAAGGATAAAGAGAATGATGAAGATTTCAAGGACATTATCAAT
GCCTTGATTGTTGCAGTGTACTTCCTCGTCCTTGCTCGTCGACGCCAACC
GGGCCCTTCGTCAACCGGGGATAGTGCCGAGGCAGTGGAAGCGAAGAAAA
TGGATAAGAAGACGTTCTCGGAGATGCGACAGACTGCGCTGGTTAGTCTT
GGGCTTCCGTCAACGGAGAGGCGGCATCGGGAGGATGTGGATCAGTGGAT
TGCGCTGGTTATGGAGCAGGGGTGGGCTCATGGCAAGGAGTGGTTTGAGA
ATGTGCCGTTAGCTGGGGAGTTAGATGGAGATGAGAGGGATTTAGGGGAT
GAGCTGGCGGGTGGGGTTGTCGAGGAGGATGGTGGTAGGGGCAGGTTGAT
GGTGTCTGGGAGGGGGGCATTGGTTGCGGGCCAGTCTTCGAGGCGTGGGC
TGCTTCCTGGGTTGGGGACTATGATGCAGGATCGGGTGGATTGGTTGAGT
GAGGATCGGAGGGAGGATTATCTTGAGTGGAAGGCGGATATGGTGGCGCG
GATTGAACAGATTGAGAGGACGGCTCAGGCTGTGTAAATGAACAACAGGC
CTGTCGAACAAGCGCTGGCCACGCTACTGCCTACACACGCTCAAGACCTC
CCACAAGAACTTCTTAGTCTCGCCATATCACTCGTCGCCCAATCGCGCAG
CTTCTCCAGCAGTCTCAAGCCCGAAGAAGAGATCGCTCGGCCGTATGCGT
GCGCTGAAATCGCTTGCAAAAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005664nuclear origin of replication recognition complex
Vocabulary: Biological Process
TermDefinition
GO:0006260DNA replication
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_006578CBS51388_006578Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006578-T1CBS51388_006578-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006578-T1.cdsCBS51388_006578-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006578-T1.exon2CBS51388_006578-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_006578-T1.exon1CBS51388_006578-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR008721
DBxrefPFAM:PF05460
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An11supercontigAn11:214890..216350 -
Powered by Drupal