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CBS51388_007507-T1, CBS51388_007507-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_007507-T1
Unique NameCBS51388_007507-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An12:369557..370424-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_007507-T1 ID=CBS51388_007507-T1|Name=CBS51388_007507-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=868bp|location=Sequence derived from alignment at An12:369557..370424- (Aspergillus niger CBS 513.88)
ATGGCCGCTGTTGCTGAGAACGGCCACGCGCCCGTGGCTGACGAGAACGC
CGCCCCCGTTGCTGCCGCCGTCGAACAGAAGGAACAGACCGAGAAGACGA
ATGGAGACTCTGTCACAGTATTCCACGACCCCGAAAACTTCAATGTGAAG
CATCCTTTGATGCACGAGTGGACTCTGTGGTTTACCAAGCCCCCTAGCGG
CAAGGTACGGATTCTTGCCGAATCAGACGCAGCAGTGGATCAGACAACTA
ACCTTTCCTGTGCGATAGGGCGATAACTGGAATGATCTGTTGAAGGAAGT
CGTGACTTTCAACTCCGTTGAGGAATTCTGGGGTATCTACGTATGTGTTC
TTTTTTTGGGTTCACCGAGGAGACCTGCCCGCTAACCAATGCTTCCATAG
AACAACATCTCGCCGACATCCGAGTTGGGCCTCAAAGCAGACTACCATCT
CTTCAAGAAGGGAGTTCGTCCCGAGTGGGAAGACCCCCAGAACAAGCACG
GAGGCAAGTGGTCATACTCTTTCAAGGACAAGCGCTCCGTGCCCATCGAC
GACCTGTGGCTGCACGCACAACTGGCCGCTATTGGCGAGACTCTTGAGAA
CGACGGTGACAACGAGGTTATGGGTGTTGTTGTGAACGTACGCAAGGGCT
TCTACCGTGTTGGTCTGTGGACTCGGACTGTTGGCAAGAGTATCCCCGGA
GACAAGAATGGTCGCACACCCGCACAGGGCAAGGAGATCCTCGAGAACAT
CGGCCGGCGCTTCAAGGAAGTCCTTCGTCTCAAGGAGGCTGATGCCGTTG
AGTTCTCGGGTCACACGGACAGCGCACACAGCGGCAGCACGAGAGCCAAG
GCCAAGTACACTGTCTAA
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Coding sequence (CDS) from alignment at An12:369557..370424-

>CBS51388_007507-T1 ID=CBS51388_007507-T1|Name=CBS51388_007507-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2232bp|location=Sequence derived from alignment at An12:369557..370424- (Aspergillus niger CBS 513.88)
AACAACATCTCGCCGACATCCGAGTTGGGCCTCAAAGCAGACTACCATCT
CTTCAAGAAGGGAGTTCGTCCCGAGTGGGAAGACCCCCAGAACAAGCACG
GAGGCAAGTGGTCATACTCTTTCAAGGACAAGCGCTCCGTGCCCATCGAC
GACCTGTGGCTGCACGCACAACTGGCCGCTATTGGCGAGACTCTTGAGAA
CGACGGTGACAACGAGGTTATGGGTGTTGTTGTGAACGTACGCAAGGGCT
TCTACCGTGTTGGTCTGTGGACTCGGACTGTTGGCAAGAGTATCCCCGGA
GACAAGAATGGTCGCACACCCGCACAGGGCAAGGAGATCCTCGAGAACAT
CGGCCGGCGCTTCAAGGAAGTCCTTCGTCTCAAGGAGGCTGATGCCGTTG
AGTTCTCGGGTCACACGGACAGCGCACACAGCGGCAGCACGAGAGCCAAG
GCCAAGTACACTGTCTAAGGCGATAACTGGAATGATCTGTTGAAGGAAGT
CGTGACTTTCAACTCCGTTGAGGAATTCTGGGGTATCTACATGGCCGCTG
TTGCTGAGAACGGCCACGCGCCCGTGGCTGACGAGAACGCCGCCCCCGTT
GCTGCCGCCGTCGAACAGAAGGAACAGACCGAGAAGACGAATGGAGACTC
TGTCACAGTATTCCACGACCCCGAAAACTTCAATGTGAAGCATCCTTTGA
TGCACGAGTGGACTCTGTGGTTTACCAAGCCCCCTAGCGGCAAGAACAAC
ATCTCGCCGACATCCGAGTTGGGCCTCAAAGCAGACTACCATCTCTTCAA
GAAGGGAGTTCGTCCCGAGTGGGAAGACCCCCAGAACAAGCACGGAGGCA
AGTGGTCATACTCTTTCAAGGACAAGCGCTCCGTGCCCATCGACGACCTG
TGGCTGCACGCACAACTGGCCGCTATTGGCGAGACTCTTGAGAACGACGG
TGACAACGAGGTTATGGGTGTTGTTGTGAACGTACGCAAGGGCTTCTACC
GTGTTGGTCTGTGGACTCGGACTGTTGGCAAGAGTATCCCCGGAGACAAG
AATGGTCGCACACCCGCACAGGGCAAGGAGATCCTCGAGAACATCGGCCG
GCGCTTCAAGGAAGTCCTTCGTCTCAAGGAGGCTGATGCCGTTGAGTTCT
CGGGTCACACGGACAGCGCACACAGCGGCAGCACGAGAGCCAAGGCCAAG
TACACTGTCTAAGGCGATAACTGGAATGATCTGTTGAAGGAAGTCGTGAC
TTTCAACTCCGTTGAGGAATTCTGGGGTATCTACATGGCCGCTGTTGCTG
AGAACGGCCACGCGCCCGTGGCTGACGAGAACGCCGCCCCCGTTGCTGCC
GCCGTCGAACAGAAGGAACAGACCGAGAAGACGAATGGAGACTCTGTCAC
AGTATTCCACGACCCCGAAAACTTCAATGTGAAGCATCCTTTGATGCACG
AGTGGACTCTGTGGTTTACCAAGCCCCCTAGCGGCAAGAACAACATCTCG
CCGACATCCGAGTTGGGCCTCAAAGCAGACTACCATCTCTTCAAGAAGGG
AGTTCGTCCCGAGTGGGAAGACCCCCAGAACAAGCACGGAGGCAAGTGGT
CATACTCTTTCAAGGACAAGCGCTCCGTGCCCATCGACGACCTGTGGCTG
CACGCACAACTGGCCGCTATTGGCGAGACTCTTGAGAACGACGGTGACAA
CGAGGTTATGGGTGTTGTTGTGAACGTACGCAAGGGCTTCTACCGTGTTG
GTCTGTGGACTCGGACTGTTGGCAAGAGTATCCCCGGAGACAAGAATGGT
CGCACACCCGCACAGGGCAAGGAGATCCTCGAGAACATCGGCCGGCGCTT
CAAGGAAGTCCTTCGTCTCAAGGAGGCTGATGCCGTTGAGTTCTCGGGTC
ACACGGACAGCGCACACAGCGGCAGCACGAGAGCCAAGGCCAAGTACACT
GTCTAAGGCGATAACTGGAATGATCTGTTGAAGGAAGTCGTGACTTTCAA
CTCCGTTGAGGAATTCTGGGGTATCTACATGGCCGCTGTTGCTGAGAACG
GCCACGCGCCCGTGGCTGACGAGAACGCCGCCCCCGTTGCTGCCGCCGTC
GAACAGAAGGAACAGACCGAGAAGACGAATGGAGACTCTGTCACAGTATT
CCACGACCCCGAAAACTTCAATGTGAAGCATCCTTTGATGCACGAGTGGA
CTCTGTGGTTTACCAAGCCCCCTAGCGGCAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0003743translation initiation factor activity
Vocabulary: Biological Process
TermDefinition
GO:0006413translational initiation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_007507CBS51388_007507Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007507-T1CBS51388_007507-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007507-T1.cdsCBS51388_007507-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007507-T1.exon3CBS51388_007507-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_007507-T1.exon2CBS51388_007507-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_007507-T1.exon1CBS51388_007507-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
NoteBUSCO:EOG092646VF
DBxrefInterPro:IPR019770
DBxrefInterPro:IPR001040
DBxrefInterPro:IPR023398
DBxrefPFAM:PF01652
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An12supercontigAn12:369557..370424 -
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