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CBS51388_007712-T1, CBS51388_007712-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_007712-T1
Unique NameCBS51388_007712-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An12:974899..975645+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_007712-T1 ID=CBS51388_007712-T1|Name=CBS51388_007712-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=747bp|location=Sequence derived from alignment at An12:974899..975645+ (Aspergillus niger CBS 513.88)
ATGAGCACCCTCGTCCACAACACCGTCGAACGCCTGGACCGGCCGAGTGC
CTACTATCTGGGCAAGGTGAGCTTCATCTCTACGACTAGCGGACCATGAC
AATACTAATTCATTAATCCTCTCCAGAACAAGCGTCGCAAGTTCAGCCAT
GATGAGGGCGAGAAACCCGAAGATCCCACCGACAACCTCAAGGATGCCAC
CACTCTCTACGTTGGCAATCTGTATGTTACAGAGTATCTCCGTTGTCAAG
TCCTTGCTAACAACACAAGTTCTTTTTACACCACCGAAGAGCAGATCCAT
GAGCTATTTGCCAAGTGAGCGGAAACCACCACCGAATGCGTTATCGACGA
GTACCGAGCTGATGGAGTACAGGTGCGGCGAGATTAAGCGGCTAGTCATG
GGCCTTGACCGGTACAACAAGACCCCCTGCGGATTTTGCTTCGTCGAATA
TTACACCCATCAGGATGCGCTGGACTGTCTGAAATACATTGGTGGCACAA
AGCTGGACGAGAGAATCATCCGGACGGATCTGGATCCTGGCTTCGAGGAG
GGTCGGCAATACGGGTATGTATATGATCGGGATTCTCGAACGCGCAGGCT
GCTGACGTTGGTAGACGTGGTAAATCGGGTGGTCAGGTCCGCGATGAGTA
CCGGGAGGAATACGACCCTGGTCGCGGTGGCTATGGACGTGCCTATGCGG
ATGACCAGCGACGACGGGAGGAGGAGGAGTATGGTAAGGGTAAGTAA
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Coding sequence (CDS) from alignment at An12:974899..975645+

>CBS51388_007712-T1 ID=CBS51388_007712-T1|Name=CBS51388_007712-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2655bp|location=Sequence derived from alignment at An12:974899..975645+ (Aspergillus niger CBS 513.88)
ATGAGCACCCTCGTCCACAACACCGTCGAACGCCTGGACCGGCCGAGTGC
CTACTATCTGGGCAAGAACAAGCGTCGCAAGTTCAGCCATGATGAGGGCG
AGAAACCCGAAGATCCCACCGACAACCTCAAGGATGCCACCACTCTCTAC
GTTGGCAATCTTTCTTTTTACACCACCGAAGAGCAGATCCATGAGCTATT
TGCCAAGTGCGGCGAGATTAAGCGGCTAGTCATGGGCCTTGACCGGTACA
ACAAGACCCCCTGCGGATTTTGCTTCGTCGAATATTACACCCATCAGGAT
GCGCTGGACTGTCTGAAATACATTGGTGGCACAAAGCTGGACGAGAGAAT
CATCCGGACGGATCTGGATCCTGGCTTCGAGGAGGGTCGGCAATACGGAC
GTGGTAAATCGGGTGGTCAGGTCCGCGATGAGTACCGGGAGGAATACGAC
CCTGGTCGCGGTGGCTATGGACGTGCCTATGCGGATGACCAGCGACGACG
GGAGGAGGAGGAGTATGGTAAGGGTAAGTAAATGAGCACCCTCGTCCACA
ACACCGTCGAACGCCTGGACCGGCCGAGTGCCTACTATCTGGGCAAGAAC
AAGCGTCGCAAGTTCAGCCATGATGAGGGCGAGAAACCCGAAGATCCCAC
CGACAACCTCAAGGATGCCACCACTCTCTACGTTGGCAATCTTTCTTTTT
ACACCACCGAAGAGCAGATCCATGAGCTATTTGCCAAGTGCGGCGAGATT
AAGCGGCTAGTCATGGGCCTTGACCGGTACAACAAGACCCCCTGCGGATT
TTGCTTCGTCGAATATTACACCCATCAGGATGCGCTGGACTGTCTGAAAT
ACATTGGTGGCACAAAGCTGGACGAGAGAATCATCCGGACGGATCTGGAT
CCTGGCTTCGAGGAGGGTCGGCAATACGGACGTGGTAAATCGGGTGGTCA
GGTCCGCGATGAGTACCGGGAGGAATACGACCCTGGTCGCGGTGGCTATG
GACGTGCCTATGCGGATGACCAGCGACGACGGGAGGAGGAGGAGTATGGT
AAGGGTAAGTAAATGAGCACCCTCGTCCACAACACCGTCGAACGCCTGGA
CCGGCCGAGTGCCTACTATCTGGGCAAGAACAAGCGTCGCAAGTTCAGCC
ATGATGAGGGCGAGAAACCCGAAGATCCCACCGACAACCTCAAGGATGCC
ACCACTCTCTACGTTGGCAATCTTTCTTTTTACACCACCGAAGAGCAGAT
CCATGAGCTATTTGCCAAGTGCGGCGAGATTAAGCGGCTAGTCATGGGCC
TTGACCGGTACAACAAGACCCCCTGCGGATTTTGCTTCGTCGAATATTAC
ACCCATCAGGATGCGCTGGACTGTCTGAAATACATTGGTGGCACAAAGCT
GGACGAGAGAATCATCCGGACGGATCTGGATCCTGGCTTCGAGGAGGGTC
GGCAATACGGACGTGGTAAATCGGGTGGTCAGGTCCGCGATGAGTACCGG
GAGGAATACGACCCTGGTCGCGGTGGCTATGGACGTGCCTATGCGGATGA
CCAGCGACGACGGGAGGAGGAGGAGTATGGTAAGGGTAAGTAAATGAGCA
CCCTCGTCCACAACACCGTCGAACGCCTGGACCGGCCGAGTGCCTACTAT
CTGGGCAAGAACAAGCGTCGCAAGTTCAGCCATGATGAGGGCGAGAAACC
CGAAGATCCCACCGACAACCTCAAGGATGCCACCACTCTCTACGTTGGCA
ATCTTTCTTTTTACACCACCGAAGAGCAGATCCATGAGCTATTTGCCAAG
TGCGGCGAGATTAAGCGGCTAGTCATGGGCCTTGACCGGTACAACAAGAC
CCCCTGCGGATTTTGCTTCGTCGAATATTACACCCATCAGGATGCGCTGG
ACTGTCTGAAATACATTGGTGGCACAAAGCTGGACGAGAGAATCATCCGG
ACGGATCTGGATCCTGGCTTCGAGGAGGGTCGGCAATACGGACGTGGTAA
ATCGGGTGGTCAGGTCCGCGATGAGTACCGGGAGGAATACGACCCTGGTC
GCGGTGGCTATGGACGTGCCTATGCGGATGACCAGCGACGACGGGAGGAG
GAGGAGTATGGTAAGGGTAAGTAAATGAGCACCCTCGTCCACAACACCGT
CGAACGCCTGGACCGGCCGAGTGCCTACTATCTGGGCAAGAACAAGCGTC
GCAAGTTCAGCCATGATGAGGGCGAGAAACCCGAAGATCCCACCGACAAC
CTCAAGGATGCCACCACTCTCTACGTTGGCAATCTTTCTTTTTACACCAC
CGAAGAGCAGATCCATGAGCTATTTGCCAAGTGCGGCGAGATTAAGCGGC
TAGTCATGGGCCTTGACCGGTACAACAAGACCCCCTGCGGATTTTGCTTC
GTCGAATATTACACCCATCAGGATGCGCTGGACTGTCTGAAATACATTGG
TGGCACAAAGCTGGACGAGAGAATCATCCGGACGGATCTGGATCCTGGCT
TCGAGGAGGGTCGGCAATACGGACGTGGTAAATCGGGTGGTCAGGTCCGC
GATGAGTACCGGGAGGAATACGACCCTGGTCGCGGTGGCTATGGACGTGC
CTATGCGGATGACCAGCGACGACGGGAGGAGGAGGAGTATGGTAAGGGTA
AGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBP20CBS51388_007712Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007712-T1CBS51388_007712-T1-proteinAspergillus niger CBS 513.88polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007712-T1.exon1CBS51388_007712-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_007712-T1.exon2CBS51388_007712-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_007712-T1.exon3CBS51388_007712-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_007712-T1.exon4CBS51388_007712-T1.exon4Aspergillus niger CBS 513.88exon
CBS51388_007712-T1.exon5CBS51388_007712-T1.exon5Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007712-T1.cdsCBS51388_007712-T1.cdsAspergillus niger CBS 513.88CDS


Properties
Property NameValue
NoteBUSCO:EOG09264G04
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR034148
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR000504
DBxrefPFAM:PF00076
ProductNuclear cap-binding protein subunit 2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An12supercontigAn12:974899..975645 +
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