|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:1044540..1046477+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007734-T1 ID=CBS51388_007734-T1|Name=CBS51388_007734-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1938bp|location=Sequence derived from alignment at An12:1044540..1046477+ (Aspergillus niger CBS 513.88)
ATGCGTCACCTCTTATCACTGCTGGTGCTTCTGATCGCATCGGCCGCCCT
GGTCTCCGCCGTCCCCGCCGGCTCCATTATCACTCCACAACCACCCGTCG
AGCCCGTTCACCTTCTCTCTTCCCAGCCCTCTGATCCCCGAAGGCCATGG
ATCCGCCTCCGTGACTGGATCATCGAGTCCATATGGGGCATCGAAAAACC
CGCATCTCGTCGATTCCCACTCAACGATTCCCCGCGCAATCGCTCTCCTC
CCTCCCGGATTCTGGCGCGCTACGGTAGTGACGTCGTACTTCGTTTCAGC
CTGCGCAATCACGATGAGGCCGAGGCATTGGCCCAGGCTGCAGACATTCT
ATTCCTGGACGTATGGGCGTCTACTCCAGCATTCGTAGATATCCGACTGG
CCGAGGAAGTCGTAAGTGGTTCATCCTTCCGTCCATATCTGCCCGGTTGA
CTGATGCCTGATCCACTGTGACCCTCGCAACAGATTCCCTCATTATTGGG
CTTGCTACCAAATTCCCTCCAGACCGCATATACTCCCCTAATAGACAACC
TGGCAGAGAGAATCTATACGACCTATCCATCTAAAAAGCCGATAGGACTT
GAAGGACAATCTGGATTTGCGTCCTCGAGTCGACCTGCGCCAAAGTTCGG
TGACCTTTTTTTCCACGAGTATCAGCCTTTGTCCGTCATTATCCCCTGGA
TGCGGCTGCTGGCTTCCATGTTTCCATCCCATGTGCGCATGATTAGCGTT
GGAGTATCTTACGAGGGTCGCGAAATTCCCGCCCTCCGACTGAGCGCAGG
CAGCTCCACCGCGGCGTCAGGCCCTCGTAAAACAATCATCGTTACGGGTG
GTAGCCATGCCCGCGAATGGATTGGCACCTCAACCGTGAACCATGTAATG
TACACGCTCATTACCAAGTATGGCAAATCCAAGGCCGTTACCCGCCTTCT
ACAGGACTTCGACTGGATCATGATCCCCACGATCAATCCCGACGGCTATG
TTTATACCTGGGAGACGGACCGACTATGGCGCAAGAATCGACAGCGGACC
AGCCTACGCTTCTGTCCCGGAATCGATCTTGACCGCGCCTGGGGCTTCGA
ATGGGACGGCGGTCGGACCCGCGCTAACCCTTGTTCAGAAAACTATGCTG
GAGACGAGCCCTTCGAGGGAATGGAAGCACAACAATTAGCACAGTGGGCG
CTCAACGAGACACAAAACAACAATGCCGACATCGTGAGCTTCCTTGACCT
TCACTCTTACTCTCAAACAATTCTCTACCCCTTCTCCTACTCCTGCTCCT
CGATCCCTCCAACGCTCGAGAGCCTGGAAGAGCTAGGCCTTGGCCTAGCC
AAGGCCATTCGGTACGCGACTCACGAAATCTACGATGTCACTTCTGCCTG
CGAAGGCATCGTCACGGCCAGTGCGGCAGATAACAACCCCGGGCGGTTCT
TCCCCATTGGTGGCAACTCCGGTGGCAGTGCGTTGGACTGGTTTTACCAC
CAAGTGCACGCGACTTATTCATACCAGATCAAGCTTCGTGATCGCGGAAG
CTACGGGTTCCTCCTTCCGTCTGAACACATCATCCCCACCGGCAAGGAGA
TCTACAATGTTGTTCTGAAATTGGGATCCTTCCTCATCGGAGGCGACTCA
TTTGACGTCGATTGGGAATCAGAACTCTTCGATCTGTCAAAGGACGAATC
CGATCTGGATAGCCGCTATTCAAAATCCAATGACCGCTCCCCGGCGTATC
TACACAACGCCAACGGCCCCCTGCCCAACATTGACGAAGACGAAGATAAG
GAATGGGTAATGGTGGAGGAAGAAGACTACACAGACGATGACGACGACGA
TGATGATGATGATGAAGAAGAGGAAGAGGAAGAGGAAGATACATATTGGG
CCACCGAACACACATACGAATTTCGGCGACGACGCTGA back to topCoding sequence (CDS) from alignment at An12:1044540..1046477+ >CBS51388_007734-T1 ID=CBS51388_007734-T1|Name=CBS51388_007734-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3732bp|location=Sequence derived from alignment at An12:1044540..1046477+ (Aspergillus niger CBS 513.88)
ATGCGTCACCTCTTATCACTGCTGGTGCTTCTGATCGCATCGGCCGCCCT
GGTCTCCGCCGTCCCCGCCGGCTCCATTATCACTCCACAACCACCCGTCG
AGCCCGTTCACCTTCTCTCTTCCCAGCCCTCTGATCCCCGAAGGCCATGG
ATCCGCCTCCGTGACTGGATCATCGAGTCCATATGGGGCATCGAAAAACC
CGCATCTCGTCGATTCCCACTCAACGATTCCCCGCGCAATCGCTCTCCTC
CCTCCCGGATTCTGGCGCGCTACGGTAGTGACGTCGTACTTCGTTTCAGC
CTGCGCAATCACGATGAGGCCGAGGCATTGGCCCAGGCTGCAGACATTCT
ATTCCTGGACGTATGGGCGTCTACTCCAGCATTCGTAGATATCCGACTGG
CCGAGGAAGTCATTCCCTCATTATTGGGCTTGCTACCAAATTCCCTCCAG
ACCGCATATACTCCCCTAATAGACAACCTGGCAGAGAGAATCTATACGAC
CTATCCATCTAAAAAGCCGATAGGACTTGAAGGACAATCTGGATTTGCGT
CCTCGAGTCGACCTGCGCCAAAGTTCGGTGACCTTTTTTTCCACGAGTAT
CAGCCTTTGTCCGTCATTATCCCCTGGATGCGGCTGCTGGCTTCCATGTT
TCCATCCCATGTGCGCATGATTAGCGTTGGAGTATCTTACGAGGGTCGCG
AAATTCCCGCCCTCCGACTGAGCGCAGGCAGCTCCACCGCGGCGTCAGGC
CCTCGTAAAACAATCATCGTTACGGGTGGTAGCCATGCCCGCGAATGGAT
TGGCACCTCAACCGTGAACCATGTAATGTACACGCTCATTACCAAGTATG
GCAAATCCAAGGCCGTTACCCGCCTTCTACAGGACTTCGACTGGATCATG
ATCCCCACGATCAATCCCGACGGCTATGTTTATACCTGGGAGACGGACCG
ACTATGGCGCAAGAATCGACAGCGGACCAGCCTACGCTTCTGTCCCGGAA
TCGATCTTGACCGCGCCTGGGGCTTCGAATGGGACGGCGGTCGGACCCGC
GCTAACCCTTGTTCAGAAAACTATGCTGGAGACGAGCCCTTCGAGGGAAT
GGAAGCACAACAATTAGCACAGTGGGCGCTCAACGAGACACAAAACAACA
ATGCCGACATCGTGAGCTTCCTTGACCTTCACTCTTACTCTCAAACAATT
CTCTACCCCTTCTCCTACTCCTGCTCCTCGATCCCTCCAACGCTCGAGAG
CCTGGAAGAGCTAGGCCTTGGCCTAGCCAAGGCCATTCGGTACGCGACTC
ACGAAATCTACGATGTCACTTCTGCCTGCGAAGGCATCGTCACGGCCAGT
GCGGCAGATAACAACCCCGGGCGGTTCTTCCCCATTGGTGGCAACTCCGG
TGGCAGTGCGTTGGACTGGTTTTACCACCAAGTGCACGCGACTTATTCAT
ACCAGATCAAGCTTCGTGATCGCGGAAGCTACGGGTTCCTCCTTCCGTCT
GAACACATCATCCCCACCGGCAAGGAGATCTACAATGTTGTTCTGAAATT
GGGATCCTTCCTCATCGGAGGCGACTCATTTGACGTCGATTGGGAATCAG
AACTCTTCGATCTGTCAAAGGACGAATCCGATCTGGATAGCCGCTATTCA
AAATCCAATGACCGCTCCCCGGCGTATCTACACAACGCCAACGGCCCCCT
GCCCAACATTGACGAAGACGAAGATAAGGAATGGGTAATGGTGGAGGAAG
AAGACTACACAGACGATGACGACGACGATGATGATGATGATGAAGAAGAG
GAAGAGGAAGAGGAAGATACATATTGGGCCACCGAACACACATACGAATT
TCGGCGACGACGCTGAATGCGTCACCTCTTATCACTGCTGGTGCTTCTGA
TCGCATCGGCCGCCCTGGTCTCCGCCGTCCCCGCCGGCTCCATTATCACT
CCACAACCACCCGTCGAGCCCGTTCACCTTCTCTCTTCCCAGCCCTCTGA
TCCCCGAAGGCCATGGATCCGCCTCCGTGACTGGATCATCGAGTCCATAT
GGGGCATCGAAAAACCCGCATCTCGTCGATTCCCACTCAACGATTCCCCG
CGCAATCGCTCTCCTCCCTCCCGGATTCTGGCGCGCTACGGTAGTGACGT
CGTACTTCGTTTCAGCCTGCGCAATCACGATGAGGCCGAGGCATTGGCCC
AGGCTGCAGACATTCTATTCCTGGACGTATGGGCGTCTACTCCAGCATTC
GTAGATATCCGACTGGCCGAGGAAGTCATTCCCTCATTATTGGGCTTGCT
ACCAAATTCCCTCCAGACCGCATATACTCCCCTAATAGACAACCTGGCAG
AGAGAATCTATACGACCTATCCATCTAAAAAGCCGATAGGACTTGAAGGA
CAATCTGGATTTGCGTCCTCGAGTCGACCTGCGCCAAAGTTCGGTGACCT
TTTTTTCCACGAGTATCAGCCTTTGTCCGTCATTATCCCCTGGATGCGGC
TGCTGGCTTCCATGTTTCCATCCCATGTGCGCATGATTAGCGTTGGAGTA
TCTTACGAGGGTCGCGAAATTCCCGCCCTCCGACTGAGCGCAGGCAGCTC
CACCGCGGCGTCAGGCCCTCGTAAAACAATCATCGTTACGGGTGGTAGCC
ATGCCCGCGAATGGATTGGCACCTCAACCGTGAACCATGTAATGTACACG
CTCATTACCAAGTATGGCAAATCCAAGGCCGTTACCCGCCTTCTACAGGA
CTTCGACTGGATCATGATCCCCACGATCAATCCCGACGGCTATGTTTATA
CCTGGGAGACGGACCGACTATGGCGCAAGAATCGACAGCGGACCAGCCTA
CGCTTCTGTCCCGGAATCGATCTTGACCGCGCCTGGGGCTTCGAATGGGA
CGGCGGTCGGACCCGCGCTAACCCTTGTTCAGAAAACTATGCTGGAGACG
AGCCCTTCGAGGGAATGGAAGCACAACAATTAGCACAGTGGGCGCTCAAC
GAGACACAAAACAACAATGCCGACATCGTGAGCTTCCTTGACCTTCACTC
TTACTCTCAAACAATTCTCTACCCCTTCTCCTACTCCTGCTCCTCGATCC
CTCCAACGCTCGAGAGCCTGGAAGAGCTAGGCCTTGGCCTAGCCAAGGCC
ATTCGGTACGCGACTCACGAAATCTACGATGTCACTTCTGCCTGCGAAGG
CATCGTCACGGCCAGTGCGGCAGATAACAACCCCGGGCGGTTCTTCCCCA
TTGGTGGCAACTCCGGTGGCAGTGCGTTGGACTGGTTTTACCACCAAGTG
CACGCGACTTATTCATACCAGATCAAGCTTCGTGATCGCGGAAGCTACGG
GTTCCTCCTTCCGTCTGAACACATCATCCCCACCGGCAAGGAGATCTACA
ATGTTGTTCTGAAATTGGGATCCTTCCTCATCGGAGGCGACTCATTTGAC
GTCGATTGGGAATCAGAACTCTTCGATCTGTCAAAGGACGAATCCGATCT
GGATAGCCGCTATTCAAAATCCAATGACCGCTCCCCGGCGTATCTACACA
ACGCCAACGGCCCCCTGCCCAACATTGACGAAGACGAAGATAAGGAATGG
GTAATGGTGGAGGAAGAAGACTACACAGACGATGACGACGACGATGATGA
TGATGATGAAGAAGAGGAAGAGGAAGAGGAAGATACATATTGGGCCACCG
AACACACATACGAATTTCGGCGACGACGCTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006508 | proteolysis |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004181 | metallocarboxypeptidase activity |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-20) |
| Note | MEROPS:MER0003908 |
| DBxref | InterPro:IPR000834 |
| DBxref | PFAM:PF00246 |
| Product | Putative metallocarboxypeptidase ecm14 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:1044540..1046477 + |
|
