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CBS51388_008122-T1, CBS51388_008122-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_008122-T1
Unique NameCBS51388_008122-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An12:2258571..2259603-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_008122-T1 ID=CBS51388_008122-T1|Name=CBS51388_008122-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1033bp|location=Sequence derived from alignment at An12:2258571..2259603- (Aspergillus niger CBS 513.88)
ATGTCTCTCAGTATAGACGCATACACCCCCACCGAAGTAATCAACCTCGT
CGCCTGAGCAGGCATTGCCAAAGGCAATACCCGCCTCGACAAAGTCTTCC
TCAGCTCCGTCTCCGCAGGATGTCTACTTGCCTTGGCGTGCGGAACCGCC
CTCAGCACAAACACAAGTACCTGGTTCCAGGAGAATGCGCCGGGGTTGAT
TCGCACCATTAGCGCGCTGGTCTTTCCGTATGGATTGTGCATGATTATCT
TAACCGGGGCGGATTTGTGCACAGGGTCATTTATGGTATACCCCCCTCCC
CTTTACTCCACTCCAACTGTGGATAATGTAGTACTAATATACCCAGTTCA
CAACGGTCGCAGCCCTACAGCGCCAACTCCCCTGGTGGAAGATGCTCCTC
CACTGGTTCATCACATTTTGGGGAAACCTATGTGGATCGCTATTTGTCGT
GGCGATTATCTTCGGCTGTATTCTCTCCCCCCTTCTCCACACCCACACCC
TAACCTAAAATCCTAACAATTGCACAGACGGCGAAGTTTTCTCCACAGAC
CCCTACAAAAGCGAAGTCATCTCCTTCGCCACCAAAAAGCAAGTCACTCC
GCACTTCCAACAAATCTTCCTCCGCGGCATCGGATGCAACTGGCTCGTTT
GTCTCGCCTGTTTCTTCGGTCTACAGGGTCGTGACCTCGCGTCTAAGATC
ATGGGCATCTGGTGGCCGATCTTCGCGTTCGTATCGCTGGGATTCGATCA
CGTCGTCGCGAACATGACCTTCATTCCGCTGGCTATCTGGCTGGATGCGC
CGGACATTACGGTGGGGTTGTACGTGTGGAAGGGGATTATCCCGACGTTG
TTGGGGAATATTGTCGGGGGTGGGCTTTTTGTAGGAACGTACTACTGGTA
CATGTATCTCTTGCAAGGGGAGAGTATCACTGTAGCTGGGTTGCGCAGAC
AGGGCATGGCTACTTCGGCGACAGCGACGCCGGCCACGGCGGGTGGGAAG
GATGATGTTGAGGCGACTGCCGGGGCGATTTAG
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Coding sequence (CDS) from alignment at An12:2258571..2259603-

>CBS51388_008122-T1 ID=CBS51388_008122-T1|Name=CBS51388_008122-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3660bp|location=Sequence derived from alignment at An12:2258571..2259603- (Aspergillus niger CBS 513.88)
ACAGGGCATGGCTACTTCGGCGACAGCGACGCCGGCCACGGCGGGTGGGA
AGGATGATGTTGAGGCGACTGCCGGGGCGATTTAGACGGCGAAGTTTTCT
CCACAGACCCCTACAAAAGCGAAGTCATCTCCTTCGCCACCAAAAAGCAA
GTCACTCCGCACTTCCAACAAATCTTCCTCCGCGGCATCGGATGCAACTG
GCTCGTTTGTCTCGCCTGTTTCTTCGGTCTACAGGGTCGTGACCTCGCGT
CTAAGATCATGGGCATCTGGTGGCCGATCTTCGCGTTCGTATCGCTGGGA
TTCGATCACGTCGTCGCGAACATGACCTTCATTCCGCTGGCTATCTGGCT
GGATGCGCCGGACATTACGGTGGGGTTTTCACAACGGTCGCAGCCCTACA
GCGCCAACTCCCCTGGTGGAAGATGCTCCTCCACTGGTTCATCACATTTT
GGGGAAACCTATGTGGATCGCTATTTGTCGTGGCGATTATCTTCGGCTGC
ATTGCCAAAGGCAATACCCGCCTCGACAAAGTCTTCCTCAGCTCCGTCTC
CGCAGGATGTCTACTTGCCTTGGCGTGCGGAACCGCCCTCAGCACAAACA
CAAGTACCTGGTTCCAGGAGAATGCGCCGGGGTTGATTCGCACCATTAGC
GCGCTGGTCTTTCCGTATGGATTGTGCATGATTATCTTAACCGGGGCGGA
TTTGTGCACAGGGTCATTTATGATGTCTCTCAACAGGGCATGGCTACTTC
GGCGACAGCGACGCCGGCCACGGCGGGTGGGAAGGATGATGTTGAGGCGA
CTGCCGGGGCGATTTAGACGGCGAAGTTTTCTCCACAGACCCCTACAAAA
GCGAAGTCATCTCCTTCGCCACCAAAAAGCAAGTCACTCCGCACTTCCAA
CAAATCTTCCTCCGCGGCATCGGATGCAACTGGCTCGTTTGTCTCGCCTG
TTTCTTCGGTCTACAGGGTCGTGACCTCGCGTCTAAGATCATGGGCATCT
GGTGGCCGATCTTCGCGTTCGTATCGCTGGGATTCGATCACGTCGTCGCG
AACATGACCTTCATTCCGCTGGCTATCTGGCTGGATGCGCCGGACATTAC
GGTGGGGTTTTCACAACGGTCGCAGCCCTACAGCGCCAACTCCCCTGGTG
GAAGATGCTCCTCCACTGGTTCATCACATTTTGGGGAAACCTATGTGGAT
CGCTATTTGTCGTGGCGATTATCTTCGGCTGCATTGCCAAAGGCAATACC
CGCCTCGACAAAGTCTTCCTCAGCTCCGTCTCCGCAGGATGTCTACTTGC
CTTGGCGTGCGGAACCGCCCTCAGCACAAACACAAGTACCTGGTTCCAGG
AGAATGCGCCGGGGTTGATTCGCACCATTAGCGCGCTGGTCTTTCCGTAT
GGATTGTGCATGATTATCTTAACCGGGGCGGATTTGTGCACAGGGTCATT
TATGATGTCTCTCAACAGGGCATGGCTACTTCGGCGACAGCGACGCCGGC
CACGGCGGGTGGGAAGGATGATGTTGAGGCGACTGCCGGGGCGATTTAGA
CGGCGAAGTTTTCTCCACAGACCCCTACAAAAGCGAAGTCATCTCCTTCG
CCACCAAAAAGCAAGTCACTCCGCACTTCCAACAAATCTTCCTCCGCGGC
ATCGGATGCAACTGGCTCGTTTGTCTCGCCTGTTTCTTCGGTCTACAGGG
TCGTGACCTCGCGTCTAAGATCATGGGCATCTGGTGGCCGATCTTCGCGT
TCGTATCGCTGGGATTCGATCACGTCGTCGCGAACATGACCTTCATTCCG
CTGGCTATCTGGCTGGATGCGCCGGACATTACGGTGGGGTTTTCACAACG
GTCGCAGCCCTACAGCGCCAACTCCCCTGGTGGAAGATGCTCCTCCACTG
GTTCATCACATTTTGGGGAAACCTATGTGGATCGCTATTTGTCGTGGCGA
TTATCTTCGGCTGCATTGCCAAAGGCAATACCCGCCTCGACAAAGTCTTC
CTCAGCTCCGTCTCCGCAGGATGTCTACTTGCCTTGGCGTGCGGAACCGC
CCTCAGCACAAACACAAGTACCTGGTTCCAGGAGAATGCGCCGGGGTTGA
TTCGCACCATTAGCGCGCTGGTCTTTCCGTATGGATTGTGCATGATTATC
TTAACCGGGGCGGATTTGTGCACAGGGTCATTTATGATGTCTCTCAACAG
GGCATGGCTACTTCGGCGACAGCGACGCCGGCCACGGCGGGTGGGAAGGA
TGATGTTGAGGCGACTGCCGGGGCGATTTAGACGGCGAAGTTTTCTCCAC
AGACCCCTACAAAAGCGAAGTCATCTCCTTCGCCACCAAAAAGCAAGTCA
CTCCGCACTTCCAACAAATCTTCCTCCGCGGCATCGGATGCAACTGGCTC
GTTTGTCTCGCCTGTTTCTTCGGTCTACAGGGTCGTGACCTCGCGTCTAA
GATCATGGGCATCTGGTGGCCGATCTTCGCGTTCGTATCGCTGGGATTCG
ATCACGTCGTCGCGAACATGACCTTCATTCCGCTGGCTATCTGGCTGGAT
GCGCCGGACATTACGGTGGGGTTTTCACAACGGTCGCAGCCCTACAGCGC
CAACTCCCCTGGTGGAAGATGCTCCTCCACTGGTTCATCACATTTTGGGG
AAACCTATGTGGATCGCTATTTGTCGTGGCGATTATCTTCGGCTGCATTG
CCAAAGGCAATACCCGCCTCGACAAAGTCTTCCTCAGCTCCGTCTCCGCA
GGATGTCTACTTGCCTTGGCGTGCGGAACCGCCCTCAGCACAAACACAAG
TACCTGGTTCCAGGAGAATGCGCCGGGGTTGATTCGCACCATTAGCGCGC
TGGTCTTTCCGTATGGATTGTGCATGATTATCTTAACCGGGGCGGATTTG
TGCACAGGGTCATTTATGATGTCTCTCAACAGGGCATGGCTACTTCGGCG
ACAGCGACGCCGGCCACGGCGGGTGGGAAGGATGATGTTGAGGCGACTGC
CGGGGCGATTTAGACGGCGAAGTTTTCTCCACAGACCCCTACAAAAGCGA
AGTCATCTCCTTCGCCACCAAAAAGCAAGTCACTCCGCACTTCCAACAAA
TCTTCCTCCGCGGCATCGGATGCAACTGGCTCGTTTGTCTCGCCTGTTTC
TTCGGTCTACAGGGTCGTGACCTCGCGTCTAAGATCATGGGCATCTGGTG
GCCGATCTTCGCGTTCGTATCGCTGGGATTCGATCACGTCGTCGCGAACA
TGACCTTCATTCCGCTGGCTATCTGGCTGGATGCGCCGGACATTACGGTG
GGGTTTTCACAACGGTCGCAGCCCTACAGCGCCAACTCCCCTGGTGGAAG
ATGCTCCTCCACTGGTTCATCACATTTTGGGGAAACCTATGTGGATCGCT
ATTTGTCGTGGCGATTATCTTCGGCTGCATTGCCAAAGGCAATACCCGCC
TCGACAAAGTCTTCCTCAGCTCCGTCTCCGCAGGATGTCTACTTGCCTTG
GCGTGCGGAACCGCCCTCAGCACAAACACAAGTACCTGGTTCCAGGAGAA
TGCGCCGGGGTTGATTCGCACCATTAGCGCGCTGGTCTTTCCGTATGGAT
TGTGCATGATTATCTTAACCGGGGCGGATTTGTGCACAGGGTCATTTATG
ATGTCTCTCA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_008122CBS51388_008122Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008122-T1CBS51388_008122-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008122-T1.cdsCBS51388_008122-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008122-T1.exon5CBS51388_008122-T1.exon5Aspergillus niger CBS 513.88exon
CBS51388_008122-T1.exon4CBS51388_008122-T1.exon4Aspergillus niger CBS 513.88exon
CBS51388_008122-T1.exon3CBS51388_008122-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_008122-T1.exon2CBS51388_008122-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_008122-T1.exon1CBS51388_008122-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR024002
DBxrefInterPro:IPR023271
DBxrefInterPro:IPR000292
DBxrefPFAM:PF01226
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An12supercontigAn12:2258571..2259603 -
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