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CBS51388_009156-T1, CBS51388_009156-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_009156-T1
Unique NameCBS51388_009156-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An14:1725541..1726227-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_009156-T1 ID=CBS51388_009156-T1|Name=CBS51388_009156-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=687bp|location=Sequence derived from alignment at An14:1725541..1726227- (Aspergillus niger CBS 513.88)
ATGAAGGTCACTGCAGCTTTTGCAAGTCTCTTGCTTACGGCCTTCGCGGC CCCTGCTCCGGAGCCTGTTCTGGTGTCGCGAAGTGCCGGTATCAACTACG TGCAGAACTACAACGGCAACCTTGGTGACTTCACCTACGACGAGAGTACC GGGACATTTTCCATGTACTGGGAGGATGGAGTCAGTTCCGACTTCGTCGT TGGTTTGGGCTGGACCACTGGCTCCTCTAAGTGGGTGACTGTACCCTTTA GGCTAAATCTCTAGGATCTAACGGTTGTCAGATCTATTACCTACTCTGCC CAATACAGCGCTTCTAGCTCCAGCTCCTACCTGGCTGTCTACGGCTGGGT CAACTCTCCTCAGGCCGAATACTACATCGTCGAGGATTACGGTGATTACA ACCCTTGCAGCTCGGCCACGAGCCTTGGTACCGTGTACTCTGATGGAAGC ACCTACCAAGTCTGCACCGACACTCGGACGAACGCGCCATCTATCACAGG AACAAGCACGTTCACGCAGTACTTCTCCGTTCGTGAAAGTACACGCACAT CCGGAACAGTGACTATCGCCAACCATTTCAATTTCTGGGCGCAGCATGGG TTCGGCAATAGCAACTTCAATTATCAGGTCATGGCGGTGGAGGCATGGAA CGGTGCTGGCAGTGCCAGTGTCACGATATCTTCTTAA
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Coding sequence (CDS) from alignment at An14:1725541..1726227-

>CBS51388_009156-T1 ID=CBS51388_009156-T1|Name=CBS51388_009156-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1272bp|location=Sequence derived from alignment at An14:1725541..1726227- (Aspergillus niger CBS 513.88)
ATCTATTACCTACTCTGCCCAATACAGCGCTTCTAGCTCCAGCTCCTACC
TGGCTGTCTACGGCTGGGTCAACTCTCCTCAGGCCGAATACTACATCGTC
GAGGATTACGGTGATTACAACCCTTGCAGCTCGGCCACGAGCCTTGGTAC
CGTGTACTCTGATGGAAGCACCTACCAAGTCTGCACCGACACTCGGACGA
ACGCGCCATCTATCACAGGAACAAGCACGTTCACGCAGTACTTCTCCGTT
CGTGAAAGTACACGCACATCCGGAACAGTGACTATCGCCAACCATTTCAA
TTTCTGGGCGCAGCATGGGTTCGGCAATAGCAACTTCAATTATCAGGTCA
TGGCGGTGGAGGCATGGAACGGTGCTGGCAGTGCCAGTGTCACGATATCT
TCTTAAATGAAGGTCACTGCAGCTTTTGCAAGTCTCTTGCTTACGGCCTT
CGCGGCCCCTGCTCCGGAGCCTGTTCTGGTGTCGCGAAGTGCCGGTATCA
ACTACGTGCAGAACTACAACGGCAACCTTGGTGACTTCACCTACGACGAG
AGTACCGGGACATTTTCCATGTACTGGGAGGATGGAGTCAGTTCCGACTT
CGTCGTTGGTTTGGGCTGGACCACTGGCTCCTCTAAATCTATTACCTACT
CTGCCCAATACAGCGCTTCTAGCTCCAGCTCCTACCTGGCTGTCTACGGC
TGGGTCAACTCTCCTCAGGCCGAATACTACATCGTCGAGGATTACGGTGA
TTACAACCCTTGCAGCTCGGCCACGAGCCTTGGTACCGTGTACTCTGATG
GAAGCACCTACCAAGTCTGCACCGACACTCGGACGAACGCGCCATCTATC
ACAGGAACAAGCACGTTCACGCAGTACTTCTCCGTTCGTGAAAGTACACG
CACATCCGGAACAGTGACTATCGCCAACCATTTCAATTTCTGGGCGCAGC
ATGGGTTCGGCAATAGCAACTTCAATTATCAGGTCATGGCGGTGGAGGCA
TGGAACGGTGCTGGCAGTGCCAGTGTCACGATATCTTCTTAAATGAAGGT
CACTGCAGCTTTTGCAAGTCTCTTGCTTACGGCCTTCGCGGCCCCTGCTC
CGGAGCCTGTTCTGGTGTCGCGAAGTGCCGGTATCAACTACGTGCAGAAC
TACAACGGCAACCTTGGTGACTTCACCTACGACGAGAGTACCGGGACATT
TTCCATGTACTGGGAGGATGGAGTCAGTTCCGACTTCGTCGTTGGTTTGG
GCTGGACCACTGGCTCCTCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
XYN5CBS51388_009156Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009156-T1CBS51388_009156-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009156-T1.cdsCBS51388_009156-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009156-T1.exon2CBS51388_009156-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_009156-T1.exon1CBS51388_009156-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
NoteSECRETED:SignalP(1-16)
NoteCAZy:GH11
DBxrefInterPro:IPR013320
DBxrefInterPro:IPR018208
DBxrefInterPro:IPR033123
DBxrefInterPro:IPR013319
DBxrefInterPro:IPR001137
DBxrefPFAM:PF00457
Product4-beta-xylanase 5
ProductEndo-1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An14supercontigAn14:1725541..1726227 -