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Sequences
The following sequences are available for this feature:
mRNA from alignment at An16:530435..531833+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_009983-T1 ID=CBS51388_009983-T1|Name=CBS51388_009983-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1399bp|location=Sequence derived from alignment at An16:530435..531833+ (Aspergillus niger CBS 513.88)
ATGTCGATGCCTGAGTTTGACCCGGCTCGTCGGCCCTCTCAGTCCGAGAA
CCAAACCATTCTCAAGTCCGAAATCCCGTTGAAGGAACGGTTCTTCCGCT
ATTTTCAGCATGAGATCACTGGTATGATTGAGCTGGTCCAGCTGATTACC
TATGCTCTTTCCTCTTTTCAGAAGAGAGGAGTCTGACGCCTGTTCTTCCT
GTAGCGCTCCAGGAACAGATGGATCGGCTGGCAGACACCTCGTTAGTGGG
AGGAGAACGAACGGACGCAACCGATCACTGTCTGGCCGGCATTGCGCGCT
TGTCCAACGAGGTCAAGGACGCGGCCAGCTATATCCCAACCTACGACCAG
CGGATATATGCTGAGGTACACACTCTCGCGCCTGAGTACCGCTTGACATA
TTGACTTTTGCAGGCCATCAAAGCTCTGCAGGATAAACTCGTCGAAACCC
GAGCTGCAGTCGAGCCACGACCCAAGTTTAGCTTCAAGACCAAGAAGAAT
GCCTCCGCCATATCGTTGTCCGATGCAGCGCATCTTGCCGCTCAGGGGCG
ACGCAGTATACCTGGGTTCCCCTCCCCTGACACATCTTCGGTCAGCTCGT
CCGCGACACAAACCCCCATGTATCCGTCAACGCCTCTGAACGAGCCCGAC
AACCGCCTTCATCTACAAAGACCGGAGCTTGCCCCGACCTCTATCCCTGC
CTTTACAATGGACGAAGATGAGGACAAGCCCAAGTCAGACGTAGGGGCTG
GATTCGCCGCGACGGCGGTATCCTCAGTGTCCGTGAACAACCACCATAAC
CTGCACATCATGCTGCCGTCCTCAGGCTCGACCGCAACTGTGCCCGCGTC
CATCACCCATCTCCGTCACTGTGTAGTCGACATGTCCATTCCCACTGCCA
ACGGAAAGCCATACACCAGTCTTACTATCAAGAGCGTCAAAGAAAGTCTG
CTCGTTTGTGGCCAGATCAACGGCCCAGCCCATATCACTGGGGTAGAGAA
CAGCATTCTTGTGATTGACTGTCGGCAGTTCCGGATGCACGACTGCTCCA
ATGTGGACGTCTACCTCAGCTGCTCCAGCAACCCGATCATCGAGGATTGC
AGCAATGTCCGATTCGGTCGGAAACCCCGTATTTACGTAGGTGGACACCC
TGCAAATATATTTCGCTCTTACTAACTAAAAACAAAACCTAGACGCTCGA
TCACGATCGTCCCGATGACGAAGACCACTGGAGCCAGGTCGAAGACTTTA
AATGGATCAAGCCGGAACCCAGTCCCAACTGGAGCCTGCTGGATGCCGAA
GACGCCGTGCCGGAAGAAGTCTGGGCGGAGATTGTTCCGGGTGGACCAGG
CTGGTCGCTGGATGATATTCTGCGAGCGATCAATATTTCATCTCATTAA back to topCoding sequence (CDS) from alignment at An16:530435..531833+ >CBS51388_009983-T1 ID=CBS51388_009983-T1|Name=CBS51388_009983-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4848bp|location=Sequence derived from alignment at An16:530435..531833+ (Aspergillus niger CBS 513.88)
ATGTCGATGCCTGAGTTTGACCCGGCTCGTCGGCCCTCTCAGTCCGAGAA
CCAAACCATTCTCAAGTCCGAAATCCCGTTGAAGGAACGGTTCTTCCGCT
ATTTTCAGCATGAGATCACTGCGCTCCAGGAACAGATGGATCGGCTGGCA
GACACCTCGTTAGTGGGAGGAGAACGAACGGACGCAACCGATCACTGTCT
GGCCGGCATTGCGCGCTTGTCCAACGAGGTCAAGGACGCGGCCAGCTATA
TCCCAACCTACGACCAGCGGATATATGCTGAGGCCATCAAAGCTCTGCAG
GATAAACTCGTCGAAACCCGAGCTGCAGTCGAGCCACGACCCAAGTTTAG
CTTCAAGACCAAGAAGAATGCCTCCGCCATATCGTTGTCCGATGCAGCGC
ATCTTGCCGCTCAGGGGCGACGCAGTATACCTGGGTTCCCCTCCCCTGAC
ACATCTTCGGTCAGCTCGTCCGCGACACAAACCCCCATGTATCCGTCAAC
GCCTCTGAACGAGCCCGACAACCGCCTTCATCTACAAAGACCGGAGCTTG
CCCCGACCTCTATCCCTGCCTTTACAATGGACGAAGATGAGGACAAGCCC
AAGTCAGACGTAGGGGCTGGATTCGCCGCGACGGCGGTATCCTCAGTGTC
CGTGAACAACCACCATAACCTGCACATCATGCTGCCGTCCTCAGGCTCGA
CCGCAACTGTGCCCGCGTCCATCACCCATCTCCGTCACTGTGTAGTCGAC
ATGTCCATTCCCACTGCCAACGGAAAGCCATACACCAGTCTTACTATCAA
GAGCGTCAAAGAAAGTCTGCTCGTTTGTGGCCAGATCAACGGCCCAGCCC
ATATCACTGGGGTAGAGAACAGCATTCTTGTGATTGACTGTCGGCAGTTC
CGGATGCACGACTGCTCCAATGTGGACGTCTACCTCAGCTGCTCCAGCAA
CCCGATCATCGAGGATTGCAGCAATGTCCGATTCGGTCGGAAACCCCGTA
TTTACACGCTCGATCACGATCGTCCCGATGACGAAGACCACTGGAGCCAG
GTCGAAGACTTTAAATGGATCAAGCCGGAACCCAGTCCCAACTGGAGCCT
GCTGGATGCCGAAGACGCCGTGCCGGAAGAAGTCTGGGCGGAGATTGTTC
CGGGTGGACCAGGCTGGTCGCTGGATGATATTCTGCGAGCGATCAATATT
TCATCTCATTAAATGTCGATGCCTGAGTTTGACCCGGCTCGTCGGCCCTC
TCAGTCCGAGAACCAAACCATTCTCAAGTCCGAAATCCCGTTGAAGGAAC
GGTTCTTCCGCTATTTTCAGCATGAGATCACTGCGCTCCAGGAACAGATG
GATCGGCTGGCAGACACCTCGTTAGTGGGAGGAGAACGAACGGACGCAAC
CGATCACTGTCTGGCCGGCATTGCGCGCTTGTCCAACGAGGTCAAGGACG
CGGCCAGCTATATCCCAACCTACGACCAGCGGATATATGCTGAGGCCATC
AAAGCTCTGCAGGATAAACTCGTCGAAACCCGAGCTGCAGTCGAGCCACG
ACCCAAGTTTAGCTTCAAGACCAAGAAGAATGCCTCCGCCATATCGTTGT
CCGATGCAGCGCATCTTGCCGCTCAGGGGCGACGCAGTATACCTGGGTTC
CCCTCCCCTGACACATCTTCGGTCAGCTCGTCCGCGACACAAACCCCCAT
GTATCCGTCAACGCCTCTGAACGAGCCCGACAACCGCCTTCATCTACAAA
GACCGGAGCTTGCCCCGACCTCTATCCCTGCCTTTACAATGGACGAAGAT
GAGGACAAGCCCAAGTCAGACGTAGGGGCTGGATTCGCCGCGACGGCGGT
ATCCTCAGTGTCCGTGAACAACCACCATAACCTGCACATCATGCTGCCGT
CCTCAGGCTCGACCGCAACTGTGCCCGCGTCCATCACCCATCTCCGTCAC
TGTGTAGTCGACATGTCCATTCCCACTGCCAACGGAAAGCCATACACCAG
TCTTACTATCAAGAGCGTCAAAGAAAGTCTGCTCGTTTGTGGCCAGATCA
ACGGCCCAGCCCATATCACTGGGGTAGAGAACAGCATTCTTGTGATTGAC
TGTCGGCAGTTCCGGATGCACGACTGCTCCAATGTGGACGTCTACCTCAG
CTGCTCCAGCAACCCGATCATCGAGGATTGCAGCAATGTCCGATTCGGTC
GGAAACCCCGTATTTACACGCTCGATCACGATCGTCCCGATGACGAAGAC
CACTGGAGCCAGGTCGAAGACTTTAAATGGATCAAGCCGGAACCCAGTCC
CAACTGGAGCCTGCTGGATGCCGAAGACGCCGTGCCGGAAGAAGTCTGGG
CGGAGATTGTTCCGGGTGGACCAGGCTGGTCGCTGGATGATATTCTGCGA
GCGATCAATATTTCATCTCATTAAATGTCGATGCCTGAGTTTGACCCGGC
TCGTCGGCCCTCTCAGTCCGAGAACCAAACCATTCTCAAGTCCGAAATCC
CGTTGAAGGAACGGTTCTTCCGCTATTTTCAGCATGAGATCACTGCGCTC
CAGGAACAGATGGATCGGCTGGCAGACACCTCGTTAGTGGGAGGAGAACG
AACGGACGCAACCGATCACTGTCTGGCCGGCATTGCGCGCTTGTCCAACG
AGGTCAAGGACGCGGCCAGCTATATCCCAACCTACGACCAGCGGATATAT
GCTGAGGCCATCAAAGCTCTGCAGGATAAACTCGTCGAAACCCGAGCTGC
AGTCGAGCCACGACCCAAGTTTAGCTTCAAGACCAAGAAGAATGCCTCCG
CCATATCGTTGTCCGATGCAGCGCATCTTGCCGCTCAGGGGCGACGCAGT
ATACCTGGGTTCCCCTCCCCTGACACATCTTCGGTCAGCTCGTCCGCGAC
ACAAACCCCCATGTATCCGTCAACGCCTCTGAACGAGCCCGACAACCGCC
TTCATCTACAAAGACCGGAGCTTGCCCCGACCTCTATCCCTGCCTTTACA
ATGGACGAAGATGAGGACAAGCCCAAGTCAGACGTAGGGGCTGGATTCGC
CGCGACGGCGGTATCCTCAGTGTCCGTGAACAACCACCATAACCTGCACA
TCATGCTGCCGTCCTCAGGCTCGACCGCAACTGTGCCCGCGTCCATCACC
CATCTCCGTCACTGTGTAGTCGACATGTCCATTCCCACTGCCAACGGAAA
GCCATACACCAGTCTTACTATCAAGAGCGTCAAAGAAAGTCTGCTCGTTT
GTGGCCAGATCAACGGCCCAGCCCATATCACTGGGGTAGAGAACAGCATT
CTTGTGATTGACTGTCGGCAGTTCCGGATGCACGACTGCTCCAATGTGGA
CGTCTACCTCAGCTGCTCCAGCAACCCGATCATCGAGGATTGCAGCAATG
TCCGATTCGGTCGGAAACCCCGTATTTACACGCTCGATCACGATCGTCCC
GATGACGAAGACCACTGGAGCCAGGTCGAAGACTTTAAATGGATCAAGCC
GGAACCCAGTCCCAACTGGAGCCTGCTGGATGCCGAAGACGCCGTGCCGG
AAGAAGTCTGGGCGGAGATTGTTCCGGGTGGACCAGGCTGGTCGCTGGAT
GATATTCTGCGAGCGATCAATATTTCATCTCATTAAATGTCGATGCCTGA
GTTTGACCCGGCTCGTCGGCCCTCTCAGTCCGAGAACCAAACCATTCTCA
AGTCCGAAATCCCGTTGAAGGAACGGTTCTTCCGCTATTTTCAGCATGAG
ATCACTGCGCTCCAGGAACAGATGGATCGGCTGGCAGACACCTCGTTAGT
GGGAGGAGAACGAACGGACGCAACCGATCACTGTCTGGCCGGCATTGCGC
GCTTGTCCAACGAGGTCAAGGACGCGGCCAGCTATATCCCAACCTACGAC
CAGCGGATATATGCTGAGGCCATCAAAGCTCTGCAGGATAAACTCGTCGA
AACCCGAGCTGCAGTCGAGCCACGACCCAAGTTTAGCTTCAAGACCAAGA
AGAATGCCTCCGCCATATCGTTGTCCGATGCAGCGCATCTTGCCGCTCAG
GGGCGACGCAGTATACCTGGGTTCCCCTCCCCTGACACATCTTCGGTCAG
CTCGTCCGCGACACAAACCCCCATGTATCCGTCAACGCCTCTGAACGAGC
CCGACAACCGCCTTCATCTACAAAGACCGGAGCTTGCCCCGACCTCTATC
CCTGCCTTTACAATGGACGAAGATGAGGACAAGCCCAAGTCAGACGTAGG
GGCTGGATTCGCCGCGACGGCGGTATCCTCAGTGTCCGTGAACAACCACC
ATAACCTGCACATCATGCTGCCGTCCTCAGGCTCGACCGCAACTGTGCCC
GCGTCCATCACCCATCTCCGTCACTGTGTAGTCGACATGTCCATTCCCAC
TGCCAACGGAAAGCCATACACCAGTCTTACTATCAAGAGCGTCAAAGAAA
GTCTGCTCGTTTGTGGCCAGATCAACGGCCCAGCCCATATCACTGGGGTA
GAGAACAGCATTCTTGTGATTGACTGTCGGCAGTTCCGGATGCACGACTG
CTCCAATGTGGACGTCTACCTCAGCTGCTCCAGCAACCCGATCATCGAGG
ATTGCAGCAATGTCCGATTCGGTCGGAAACCCCGTATTTACACGCTCGAT
CACGATCGTCCCGATGACGAAGACCACTGGAGCCAGGTCGAAGACTTTAA
ATGGATCAAGCCGGAACCCAGTCCCAACTGGAGCCTGCTGGATGCCGAAG
ACGCCGTGCCGGAAGAAGTCTGGGCGGAGATTGTTCCGGGTGGACCAGGC
TGGTCGCTGGATGATATTCTGCGAGCGATCAATATTTCATCTCATTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0000902 | cell morphogenesis |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0015631 | tubulin binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR017901 |
| DBxref | InterPro:IPR038397 |
| DBxref | InterPro:IPR016098 |
| DBxref | InterPro:IPR031925 |
| DBxref | InterPro:IPR012945 |
| DBxref | InterPro:IPR006599 |
| DBxref | PFAM:PF07986 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An16 | supercontig | An16:530435..531833 + |
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