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Sequences
The following sequences are available for this feature:
mRNA from alignment at An17:392540..393971+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_010617-T1 ID=CBS51388_010617-T1|Name=CBS51388_010617-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1432bp|location=Sequence derived from alignment at An17:392540..393971+ (Aspergillus niger CBS 513.88)
ATGCAGGCCGTCCGCCGTAACACCGTCGCTGCCCTTCGCAATGCTGCTGC
CACGCAGCGCCGGGCATACTCTGCCTCGGCCAGCCCGGCTTACGCTGAGA
CTGTGAACAACCTTCGCATTAATGGAGACACCAAGGTTATCTTCCAGGGT
TTCACTGGAAAGCAGGGAACGTACGTCTTTTTTGCCCGATCCGCAGGGAA
CGCTGTTTATCATGCATGACATGCTGACGTTGCCATTTTTCGTCTTTCCG
CAGTTTCCACGCTGAGCAAGCTATCGCCTATGGTATTATCTCTTCCTACG
TCTGCACCAATTAGATAGGTGTCTCCGGCGGTTTCACATGGGAAACTCAC
AACTGCTAGGCACCAAGGTCGTTGGTGGAACCAACCCGAAGAAGGCCGGC
TCGATGCACCTTGACCGTCCCGTCTTCGCGAACGTGAGCGAGGCCGTTAA
GGAGACTGGAGCTACCGCTACTGCTCTCTTCGTCCCGTATGCATCCGGTG
TCTTAATCGAGGAAAGAAGGATCATTTGCTAATTCCATGACTCTAGCCCC
CCCTTGGCCGCTAAGGGTATCGAGGAGGCCATCGAGGCCGAAATTCCTCT
GGCTGTCTGGTAGGCGACTCCTTCTCAATGACGATAGAACAACCCAGCAT
GTGCTAACAACCGGGATAGTATCACCGAGGGTATCCCTCAGCACGGTATG
TTTATTAGCCATGACTTAGCGTCGACGATCTCTGCATGTTGGGTGTAGGA
CTGACCAACAATCAACCAGACATGGTTCGTATCACCGATATCCTGAAGAC
GCAGAACAAGACCCGTCTGGTGGGTCCTAACTGCCCTGGTATCATCGCTC
CTGTAAGTCGCATCCAAAAACCACTAGGCGATCCTTTTGGACAGGGGTCA
AGATATTAATGGTGAAATTTGCGATGTGTAGGGCCAATGCAAGATTGGTA
TCATGCCTGGATTCATTCACAAGCGTGGACGTATCGGTATTGTGTCTCGG
TCCGGTACCCTGACCTACGAGGCCGTCAACCAGACCACCCAGGCTGGTCT
TGGTCAGTCCCTGGTCGTCGGTATCGGTGGTGACCCCTTCTCCGGCACCA
ACTTCATCGACTGCCTGAAGATCTTCCTCGAGGACGAGGAGACCGACGGT
ATCATCATGATTGGTGAGATCGGTGGTAGCGCCGAGGAGGATGCTGCCGA
GTTCCTCAAGGCCAACAACAAGTACAACAAGCCCGCCGTTGGTTTCATCG
CCGGCATTAGCGCTCCCCCGGGCCGTCGTATGGGTCACGCCGGAGCCATC
GTCAGCGGCGGCAAGGGTGGCGCTGACTCTAAGATCGCCGCTCTCGAGGC
GGCTGGTGTTGTTGTCGAGCGCAGCCCCGCTTCCCTGGGCAAGGCCCTCC
TGAACGAATTCGTCAAGAGGGACCTGGTCTAG back to topCoding sequence (CDS) from alignment at An17:392540..393971+ >CBS51388_010617-T1 ID=CBS51388_010617-T1|Name=CBS51388_010617-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6993bp|location=Sequence derived from alignment at An17:392540..393971+ (Aspergillus niger CBS 513.88)
ATGCAGGCCGTCCGCCGTAACACCGTCGCTGCCCTTCGCAATGCTGCTGC
CACGCAGCGCCGGGCATACTCTGCCTCGGCCAGCCCGGCTTACGCTGAGA
CTGTGAACAACCTTCGCATTAATGGAGACACCAAGGTTATCTTCCAGGGT
TTCACTGGAAAGCAGGGAACTTTCCACGCTGAGCAAGCTATCGCCTATGG
CACCAAGGTCGTTGGTGGAACCAACCCGAAGAAGGCCGGCTCGATGCACC
TTGACCGTCCCGTCTTCGCGAACGTGAGCGAGGCCGTTAAGGAGACTGGA
GCTACCGCTACTGCTCTCTTCGTCCCCCCCCCCTTGGCCGCTAAGGGTAT
CGAGGAGGCCATCGAGGCCGAAATTCCTCTGGCTGTCTGTATCACCGAGG
GTATCCCTCAGCACGACATGGTTCGTATCACCGATATCCTGAAGACGCAG
AACAAGACCCGTCTGGTGGGTCCTAACTGCCCTGGTATCATCGCTCCTGG
CCAATGCAAGATTGGTATCATGCCTGGATTCATTCACAAGCGTGGACGTA
TCGGTATTGTGTCTCGGTCCGGTACCCTGACCTACGAGGCCGTCAACCAG
ACCACCCAGGCTGGTCTTGGTCAGTCCCTGGTCGTCGGTATCGGTGGTGA
CCCCTTCTCCGGCACCAACTTCATCGACTGCCTGAAGATCTTCCTCGAGG
ACGAGGAGACCGACGGTATCATCATGATTGGTGAGATCGGTGGTAGCGCC
GAGGAGGATGCTGCCGAGTTCCTCAAGGCCAACAACAAGTACAACAAGCC
CGCCGTTGGTTTCATCGCCGGCATTAGCGCTCCCCCGGGCCGTCGTATGG
GTCACGCCGGAGCCATCGTCAGCGGCGGCAAGGGTGGCGCTGACTCTAAG
ATCGCCGCTCTCGAGGCGGCTGGTGTTGTTGTCGAGCGCAGCCCCGCTTC
CCTGGGCAAGGCCCTCCTGAACGAATTCGTCAAGAGGGACCTGGTCTAGA
TGCAGGCCGTCCGCCGTAACACCGTCGCTGCCCTTCGCAATGCTGCTGCC
ACGCAGCGCCGGGCATACTCTGCCTCGGCCAGCCCGGCTTACGCTGAGAC
TGTGAACAACCTTCGCATTAATGGAGACACCAAGGTTATCTTCCAGGGTT
TCACTGGAAAGCAGGGAACTTTCCACGCTGAGCAAGCTATCGCCTATGGC
ACCAAGGTCGTTGGTGGAACCAACCCGAAGAAGGCCGGCTCGATGCACCT
TGACCGTCCCGTCTTCGCGAACGTGAGCGAGGCCGTTAAGGAGACTGGAG
CTACCGCTACTGCTCTCTTCGTCCCCCCCCCCTTGGCCGCTAAGGGTATC
GAGGAGGCCATCGAGGCCGAAATTCCTCTGGCTGTCTGTATCACCGAGGG
TATCCCTCAGCACGACATGGTTCGTATCACCGATATCCTGAAGACGCAGA
ACAAGACCCGTCTGGTGGGTCCTAACTGCCCTGGTATCATCGCTCCTGGC
CAATGCAAGATTGGTATCATGCCTGGATTCATTCACAAGCGTGGACGTAT
CGGTATTGTGTCTCGGTCCGGTACCCTGACCTACGAGGCCGTCAACCAGA
CCACCCAGGCTGGTCTTGGTCAGTCCCTGGTCGTCGGTATCGGTGGTGAC
CCCTTCTCCGGCACCAACTTCATCGACTGCCTGAAGATCTTCCTCGAGGA
CGAGGAGACCGACGGTATCATCATGATTGGTGAGATCGGTGGTAGCGCCG
AGGAGGATGCTGCCGAGTTCCTCAAGGCCAACAACAAGTACAACAAGCCC
GCCGTTGGTTTCATCGCCGGCATTAGCGCTCCCCCGGGCCGTCGTATGGG
TCACGCCGGAGCCATCGTCAGCGGCGGCAAGGGTGGCGCTGACTCTAAGA
TCGCCGCTCTCGAGGCGGCTGGTGTTGTTGTCGAGCGCAGCCCCGCTTCC
CTGGGCAAGGCCCTCCTGAACGAATTCGTCAAGAGGGACCTGGTCTAGAT
GCAGGCCGTCCGCCGTAACACCGTCGCTGCCCTTCGCAATGCTGCTGCCA
CGCAGCGCCGGGCATACTCTGCCTCGGCCAGCCCGGCTTACGCTGAGACT
GTGAACAACCTTCGCATTAATGGAGACACCAAGGTTATCTTCCAGGGTTT
CACTGGAAAGCAGGGAACTTTCCACGCTGAGCAAGCTATCGCCTATGGCA
CCAAGGTCGTTGGTGGAACCAACCCGAAGAAGGCCGGCTCGATGCACCTT
GACCGTCCCGTCTTCGCGAACGTGAGCGAGGCCGTTAAGGAGACTGGAGC
TACCGCTACTGCTCTCTTCGTCCCCCCCCCCTTGGCCGCTAAGGGTATCG
AGGAGGCCATCGAGGCCGAAATTCCTCTGGCTGTCTGTATCACCGAGGGT
ATCCCTCAGCACGACATGGTTCGTATCACCGATATCCTGAAGACGCAGAA
CAAGACCCGTCTGGTGGGTCCTAACTGCCCTGGTATCATCGCTCCTGGCC
AATGCAAGATTGGTATCATGCCTGGATTCATTCACAAGCGTGGACGTATC
GGTATTGTGTCTCGGTCCGGTACCCTGACCTACGAGGCCGTCAACCAGAC
CACCCAGGCTGGTCTTGGTCAGTCCCTGGTCGTCGGTATCGGTGGTGACC
CCTTCTCCGGCACCAACTTCATCGACTGCCTGAAGATCTTCCTCGAGGAC
GAGGAGACCGACGGTATCATCATGATTGGTGAGATCGGTGGTAGCGCCGA
GGAGGATGCTGCCGAGTTCCTCAAGGCCAACAACAAGTACAACAAGCCCG
CCGTTGGTTTCATCGCCGGCATTAGCGCTCCCCCGGGCCGTCGTATGGGT
CACGCCGGAGCCATCGTCAGCGGCGGCAAGGGTGGCGCTGACTCTAAGAT
CGCCGCTCTCGAGGCGGCTGGTGTTGTTGTCGAGCGCAGCCCCGCTTCCC
TGGGCAAGGCCCTCCTGAACGAATTCGTCAAGAGGGACCTGGTCTAGATG
CAGGCCGTCCGCCGTAACACCGTCGCTGCCCTTCGCAATGCTGCTGCCAC
GCAGCGCCGGGCATACTCTGCCTCGGCCAGCCCGGCTTACGCTGAGACTG
TGAACAACCTTCGCATTAATGGAGACACCAAGGTTATCTTCCAGGGTTTC
ACTGGAAAGCAGGGAACTTTCCACGCTGAGCAAGCTATCGCCTATGGCAC
CAAGGTCGTTGGTGGAACCAACCCGAAGAAGGCCGGCTCGATGCACCTTG
ACCGTCCCGTCTTCGCGAACGTGAGCGAGGCCGTTAAGGAGACTGGAGCT
ACCGCTACTGCTCTCTTCGTCCCCCCCCCCTTGGCCGCTAAGGGTATCGA
GGAGGCCATCGAGGCCGAAATTCCTCTGGCTGTCTGTATCACCGAGGGTA
TCCCTCAGCACGACATGGTTCGTATCACCGATATCCTGAAGACGCAGAAC
AAGACCCGTCTGGTGGGTCCTAACTGCCCTGGTATCATCGCTCCTGGCCA
ATGCAAGATTGGTATCATGCCTGGATTCATTCACAAGCGTGGACGTATCG
GTATTGTGTCTCGGTCCGGTACCCTGACCTACGAGGCCGTCAACCAGACC
ACCCAGGCTGGTCTTGGTCAGTCCCTGGTCGTCGGTATCGGTGGTGACCC
CTTCTCCGGCACCAACTTCATCGACTGCCTGAAGATCTTCCTCGAGGACG
AGGAGACCGACGGTATCATCATGATTGGTGAGATCGGTGGTAGCGCCGAG
GAGGATGCTGCCGAGTTCCTCAAGGCCAACAACAAGTACAACAAGCCCGC
CGTTGGTTTCATCGCCGGCATTAGCGCTCCCCCGGGCCGTCGTATGGGTC
ACGCCGGAGCCATCGTCAGCGGCGGCAAGGGTGGCGCTGACTCTAAGATC
GCCGCTCTCGAGGCGGCTGGTGTTGTTGTCGAGCGCAGCCCCGCTTCCCT
GGGCAAGGCCCTCCTGAACGAATTCGTCAAGAGGGACCTGGTCTAGATGC
AGGCCGTCCGCCGTAACACCGTCGCTGCCCTTCGCAATGCTGCTGCCACG
CAGCGCCGGGCATACTCTGCCTCGGCCAGCCCGGCTTACGCTGAGACTGT
GAACAACCTTCGCATTAATGGAGACACCAAGGTTATCTTCCAGGGTTTCA
CTGGAAAGCAGGGAACTTTCCACGCTGAGCAAGCTATCGCCTATGGCACC
AAGGTCGTTGGTGGAACCAACCCGAAGAAGGCCGGCTCGATGCACCTTGA
CCGTCCCGTCTTCGCGAACGTGAGCGAGGCCGTTAAGGAGACTGGAGCTA
CCGCTACTGCTCTCTTCGTCCCCCCCCCCTTGGCCGCTAAGGGTATCGAG
GAGGCCATCGAGGCCGAAATTCCTCTGGCTGTCTGTATCACCGAGGGTAT
CCCTCAGCACGACATGGTTCGTATCACCGATATCCTGAAGACGCAGAACA
AGACCCGTCTGGTGGGTCCTAACTGCCCTGGTATCATCGCTCCTGGCCAA
TGCAAGATTGGTATCATGCCTGGATTCATTCACAAGCGTGGACGTATCGG
TATTGTGTCTCGGTCCGGTACCCTGACCTACGAGGCCGTCAACCAGACCA
CCCAGGCTGGTCTTGGTCAGTCCCTGGTCGTCGGTATCGGTGGTGACCCC
TTCTCCGGCACCAACTTCATCGACTGCCTGAAGATCTTCCTCGAGGACGA
GGAGACCGACGGTATCATCATGATTGGTGAGATCGGTGGTAGCGCCGAGG
AGGATGCTGCCGAGTTCCTCAAGGCCAACAACAAGTACAACAAGCCCGCC
GTTGGTTTCATCGCCGGCATTAGCGCTCCCCCGGGCCGTCGTATGGGTCA
CGCCGGAGCCATCGTCAGCGGCGGCAAGGGTGGCGCTGACTCTAAGATCG
CCGCTCTCGAGGCGGCTGGTGTTGTTGTCGAGCGCAGCCCCGCTTCCCTG
GGCAAGGCCCTCCTGAACGAATTCGTCAAGAGGGACCTGGTCTAGATGCA
GGCCGTCCGCCGTAACACCGTCGCTGCCCTTCGCAATGCTGCTGCCACGC
AGCGCCGGGCATACTCTGCCTCGGCCAGCCCGGCTTACGCTGAGACTGTG
AACAACCTTCGCATTAATGGAGACACCAAGGTTATCTTCCAGGGTTTCAC
TGGAAAGCAGGGAACTTTCCACGCTGAGCAAGCTATCGCCTATGGCACCA
AGGTCGTTGGTGGAACCAACCCGAAGAAGGCCGGCTCGATGCACCTTGAC
CGTCCCGTCTTCGCGAACGTGAGCGAGGCCGTTAAGGAGACTGGAGCTAC
CGCTACTGCTCTCTTCGTCCCCCCCCCCTTGGCCGCTAAGGGTATCGAGG
AGGCCATCGAGGCCGAAATTCCTCTGGCTGTCTGTATCACCGAGGGTATC
CCTCAGCACGACATGGTTCGTATCACCGATATCCTGAAGACGCAGAACAA
GACCCGTCTGGTGGGTCCTAACTGCCCTGGTATCATCGCTCCTGGCCAAT
GCAAGATTGGTATCATGCCTGGATTCATTCACAAGCGTGGACGTATCGGT
ATTGTGTCTCGGTCCGGTACCCTGACCTACGAGGCCGTCAACCAGACCAC
CCAGGCTGGTCTTGGTCAGTCCCTGGTCGTCGGTATCGGTGGTGACCCCT
TCTCCGGCACCAACTTCATCGACTGCCTGAAGATCTTCCTCGAGGACGAG
GAGACCGACGGTATCATCATGATTGGTGAGATCGGTGGTAGCGCCGAGGA
GGATGCTGCCGAGTTCCTCAAGGCCAACAACAAGTACAACAAGCCCGCCG
TTGGTTTCATCGCCGGCATTAGCGCTCCCCCGGGCCGTCGTATGGGTCAC
GCCGGAGCCATCGTCAGCGGCGGCAAGGGTGGCGCTGACTCTAAGATCGC
CGCTCTCGAGGCGGCTGGTGTTGTTGTCGAGCGCAGCCCCGCTTCCCTGG
GCAAGGCCCTCCTGAACGAATTCGTCAAGAGGGACCTGGTCTAGATGCAG
GCCGTCCGCCGTAACACCGTCGCTGCCCTTCGCAATGCTGCTGCCACGCA
GCGCCGGGCATACTCTGCCTCGGCCAGCCCGGCTTACGCTGAGACTGTGA
ACAACCTTCGCATTAATGGAGACACCAAGGTTATCTTCCAGGGTTTCACT
GGAAAGCAGGGAACTTTCCACGCTGAGCAAGCTATCGCCTATGGCACCAA
GGTCGTTGGTGGAACCAACCCGAAGAAGGCCGGCTCGATGCACCTTGACC
GTCCCGTCTTCGCGAACGTGAGCGAGGCCGTTAAGGAGACTGGAGCTACC
GCTACTGCTCTCTTCGTCCCCCCCCCCTTGGCCGCTAAGGGTATCGAGGA
GGCCATCGAGGCCGAAATTCCTCTGGCTGTCTGTATCACCGAGGGTATCC
CTCAGCACGACATGGTTCGTATCACCGATATCCTGAAGACGCAGAACAAG
ACCCGTCTGGTGGGTCCTAACTGCCCTGGTATCATCGCTCCTGGCCAATG
CAAGATTGGTATCATGCCTGGATTCATTCACAAGCGTGGACGTATCGGTA
TTGTGTCTCGGTCCGGTACCCTGACCTACGAGGCCGTCAACCAGACCACC
CAGGCTGGTCTTGGTCAGTCCCTGGTCGTCGGTATCGGTGGTGACCCCTT
CTCCGGCACCAACTTCATCGACTGCCTGAAGATCTTCCTCGAGGACGAGG
AGACCGACGGTATCATCATGATTGGTGAGATCGGTGGTAGCGCCGAGGAG
GATGCTGCCGAGTTCCTCAAGGCCAACAACAAGTACAACAAGCCCGCCGT
TGGTTTCATCGCCGGCATTAGCGCTCCCCCGGGCCGTCGTATGGGTCACG
CCGGAGCCATCGTCAGCGGCGGCAAGGGTGGCGCTGACTCTAAGATCGCC
GCTCTCGAGGCGGCTGGTGTTGTTGTCGAGCGCAGCCCCGCTTCCCTGGG
CAAGGCCCTCCTGAACGAATTCGTCAAGAGGGACCTGGTCTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092638CT |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR017440 |
| DBxref | InterPro:IPR033847 |
| DBxref | InterPro:IPR005810 |
| DBxref | InterPro:IPR016102 |
| DBxref | InterPro:IPR005811 |
| DBxref | InterPro:IPR003781 |
| DBxref | PFAM:PF13607 |
| DBxref | PFAM:PF00549 |
| DBxref | PFAM:PF02629 |
| Product | mitochondrial |
| Product | Succinate--CoA ligase [ADP-forming] subunit alpha |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An17 | supercontig | An17:392540..393971 + |
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