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Sequences
The following sequences are available for this feature:
mRNA from alignment at An18:881215..882940+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_010977-T1 ID=CBS51388_010977-T1|Name=CBS51388_010977-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1726bp|location=Sequence derived from alignment at An18:881215..882940+ (Aspergillus niger CBS 513.88)
ATGGCAGCCGCGCCAGATATCGATCCATATGAGGTGTTGGGGGTGGCAAG
GGATGCAGCCTTGTCGGATATCAAATCTGCCCATCGCAAGCTCGTGTTGA
AATGTCACCCCGATAAGATCAAAGATGAGTCGCTGAGAAGTCAGGCTCAG
GATGAATTTCAGAAGGTGCAGCAGGCCTACGAGACCCTTTCGGATGAGAC
GAGAAGGGCCAAGTACGATGCGAAGGCTCGGCTGGCTGAGCTACGTCGCC
AAATGCATGAGCAAGGTGTACCGATCAATGGTTCATCTGCCTATGCCGCC
CCGCGCGCAAGTGGCTCGAGTGGCCCTCGCGAGTATCGCAACGGACGGTA
CTACGAGGAGAGGACGCCGGCTGATGCAGCCACCTATTCCGATGACGATC
TCCAATTCTCCGAAGAGTCGCGCTCAACCTCCCGGAAATACGATGAGTAT
AAGAAACGATACTCCTCCAAACCCCCGAGCGAGAAGAAGAAAAGCAAGAG
CGATGGCCCTAGTACTCGTGCGGCGAAGGATATGGCTCGCGACAATTCGA
GGACGACCCACAGCAGTCGTGCCAAATATCGTACCAGGGAACGACAACGG
GATGCCTACGAGTAAGTATGAGCGGGCCGTTCCGTACAGCGACTCCGAAG
ACGATGGCGGCGCATCTGATTCCAGCGCCTCGTCCACGGTTTACGTGAAG
GTTAAGCGCCCCTCGGAAAGGCGCAACCGGGAGTCATCTTCTCGCAAGTC
CCGACCGGCTGACCTCCCGCGCCGCCATACCTCGACCCGCTACGAAGACG
AGTACACGGACGACTATGAGTCGAAGCATGACAAGCTACACCACACCGCC
AAAGATTACATTAGGCGCTCCAAGGGAACCGTTCCGATCGAAATCGACAG
ACGTCCACAAGCGTCCCGCTCGCCCCCGCGCAATCATGGCTACGAATCCG
CTGATCCGGAGTCTTCCTCGTCACGACACTCGGGCCGCACGAAACGACCG
AGCAAGGAAAGTGTTCGTACAAGTAATTCTCGCAATGGATCATACGAGAA
GCTTGAGGCCCAGGCCCGGTCCTACGACGTCAAGATACCTAGCATACCGA
CTACGGCAACTTCACCGTCAGTGAAGATTCCTTCATCGGTCCGGCCATCC
CTCCAGCCCTCACGCTCTGCGAGCGCTGCACAATCCTATTCCCGCGCCAG
GGGAATGAGTCGGGAAAATCCACTGCATAACATGGTCCATGAAGCGAGTC
GGACAGCGAAACTGCGAACGGACAAGTACGATTCCGGCTACTCGAGTCCA
GGCACGCCAGAAATGGCAGCCGGCGAGAGTCCGCCCAAGTCGACTCGCTA
CAAGATTGTGACGGAACCGGACACCGTGCTTAGAGAACCCAGTATACCAC
TACCCCAGAAGTCCCCAAGATACGCAAGGGGGGGTTCACCGCCACATCAA
GAGCGCCCTATGCCGAAGCCTCCCGTTCGGAGTAGCACCTACACCTACCC
CACAGAACACATGCGCTATGAGTCCGCGGCTCGTCCCAGTATGTCCCGGC
AATCCTCGAGCCGGCCTACGTATGGTGAGATCCGTTCGCCCAAGGACAAA
GAGTACAGGTATGCGCGAGAGGTGGGGCCAGATTACATCCCATCCCGCGA
TGCTTACATGCGACAGCCATACGGGGAGTACCCGGTTCCGCCCCCCGAAC
GGCGGCAATCCACATATGCTGGATGA back to topCoding sequence (CDS) from alignment at An18:881215..882940+ >CBS51388_010977-T1 ID=CBS51388_010977-T1|Name=CBS51388_010977-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3396bp|location=Sequence derived from alignment at An18:881215..882940+ (Aspergillus niger CBS 513.88)
ATGGCAGCCGCGCCAGATATCGATCCATATGAGGTGTTGGGGGTGGCAAG
GGATGCAGCCTTGTCGGATATCAAATCTGCCCATCGCAAGCTCGTGTTGA
AATGTCACCCCGATAAGATCAAAGATGAGTCGCTGAGAAGTCAGGCTCAG
GATGAATTTCAGAAGGTGCAGCAGGCCTACGAGACCCTTTCGGATGAGAC
GAGAAGGGCCAAGTACGATGCGAAGGCTCGGCTGGCTGAGCTACGTCGCC
AAATGCATGAGCAAGGTGTACCGATCAATGGTTCATCTGCCTATGCCGCC
CCGCGCGCAAGTGGCTCGAGTGGCCCTCGCGAGTATCGCAACGGACGGTA
CTACGAGGAGAGGACGCCGGCTGATGCAGCCACCTATTCCGATGACGATC
TCCAATTCTCCGAAGAGTCGCGCTCAACCTCCCGGAAATACGATGAGTAT
AAGAAACGATACTCCTCCAAACCCCCGAGCGAGAAGAAGAAAAGCAAGAG
CGATGGCCCTAGTACTCGTGCGGCGAAGGATATGGCTCGCGACAATTCGA
GGACGACCCACAGCAGTCGTGCCAAATATCGTACCAGGGAACGACAACGG
GATGCCTACGACGACTCCGAAGACGATGGCGGCGCATCTGATTCCAGCGC
CTCGTCCACGGTTTACGTGAAGGTTAAGCGCCCCTCGGAAAGGCGCAACC
GGGAGTCATCTTCTCGCAAGTCCCGACCGGCTGACCTCCCGCGCCGCCAT
ACCTCGACCCGCTACGAAGACGAGTACACGGACGACTATGAGTCGAAGCA
TGACAAGCTACACCACACCGCCAAAGATTACATTAGGCGCTCCAAGGGAA
CCGTTCCGATCGAAATCGACAGACGTCCACAAGCGTCCCGCTCGCCCCCG
CGCAATCATGGCTACGAATCCGCTGATCCGGAGTCTTCCTCGTCACGACA
CTCGGGCCGCACGAAACGACCGAGCAAGGAAAGTGTTCGTACAAGTAATT
CTCGCAATGGATCATACGAGAAGCTTGAGGCCCAGGCCCGGTCCTACGAC
GTCAAGATACCTAGCATACCGACTACGGCAACTTCACCGTCAGTGAAGAT
TCCTTCATCGGTCCGGCCATCCCTCCAGCCCTCACGCTCTGCGAGCGCTG
CACAATCCTATTCCCGCGCCAGGGGAATGAGTCGGGAAAATCCACTGCAT
AACATGGTCCATGAAGCGAGTCGGACAGCGAAACTGCGAACGGACAAGTA
CGATTCCGGCTACTCGAGTCCAGGCACGCCAGAAATGGCAGCCGGCGAGA
GTCCGCCCAAGTCGACTCGCTACAAGATTGTGACGGAACCGGACACCGTG
CTTAGAGAACCCAGTATACCACTACCCCAGAAGTCCCCAAGATACGCAAG
GGGGGGTTCACCGCCACATCAAGAGCGCCCTATGCCGAAGCCTCCCGTTC
GGAGTAGCACCTACACCTACCCCACAGAACACATGCGCTATGAGTCCGCG
GCTCGTCCCAGTATGTCCCGGCAATCCTCGAGCCGGCCTACGTATGGTGA
GATCCGTTCGCCCAAGGACAAAGAGTACAGGTATGCGCGAGAGGTGGGGC
CAGATTACATCCCATCCCGCGATGCTTACATGCGACAGCCATACGGGGAG
TACCCGGTTCCGCCCCCCGAACGGCGGCAATCCACATATGCTGGATGAAT
GGCAGCCGCGCCAGATATCGATCCATATGAGGTGTTGGGGGTGGCAAGGG
ATGCAGCCTTGTCGGATATCAAATCTGCCCATCGCAAGCTCGTGTTGAAA
TGTCACCCCGATAAGATCAAAGATGAGTCGCTGAGAAGTCAGGCTCAGGA
TGAATTTCAGAAGGTGCAGCAGGCCTACGAGACCCTTTCGGATGAGACGA
GAAGGGCCAAGTACGATGCGAAGGCTCGGCTGGCTGAGCTACGTCGCCAA
ATGCATGAGCAAGGTGTACCGATCAATGGTTCATCTGCCTATGCCGCCCC
GCGCGCAAGTGGCTCGAGTGGCCCTCGCGAGTATCGCAACGGACGGTACT
ACGAGGAGAGGACGCCGGCTGATGCAGCCACCTATTCCGATGACGATCTC
CAATTCTCCGAAGAGTCGCGCTCAACCTCCCGGAAATACGATGAGTATAA
GAAACGATACTCCTCCAAACCCCCGAGCGAGAAGAAGAAAAGCAAGAGCG
ATGGCCCTAGTACTCGTGCGGCGAAGGATATGGCTCGCGACAATTCGAGG
ACGACCCACAGCAGTCGTGCCAAATATCGTACCAGGGAACGACAACGGGA
TGCCTACGACGACTCCGAAGACGATGGCGGCGCATCTGATTCCAGCGCCT
CGTCCACGGTTTACGTGAAGGTTAAGCGCCCCTCGGAAAGGCGCAACCGG
GAGTCATCTTCTCGCAAGTCCCGACCGGCTGACCTCCCGCGCCGCCATAC
CTCGACCCGCTACGAAGACGAGTACACGGACGACTATGAGTCGAAGCATG
ACAAGCTACACCACACCGCCAAAGATTACATTAGGCGCTCCAAGGGAACC
GTTCCGATCGAAATCGACAGACGTCCACAAGCGTCCCGCTCGCCCCCGCG
CAATCATGGCTACGAATCCGCTGATCCGGAGTCTTCCTCGTCACGACACT
CGGGCCGCACGAAACGACCGAGCAAGGAAAGTGTTCGTACAAGTAATTCT
CGCAATGGATCATACGAGAAGCTTGAGGCCCAGGCCCGGTCCTACGACGT
CAAGATACCTAGCATACCGACTACGGCAACTTCACCGTCAGTGAAGATTC
CTTCATCGGTCCGGCCATCCCTCCAGCCCTCACGCTCTGCGAGCGCTGCA
CAATCCTATTCCCGCGCCAGGGGAATGAGTCGGGAAAATCCACTGCATAA
CATGGTCCATGAAGCGAGTCGGACAGCGAAACTGCGAACGGACAAGTACG
ATTCCGGCTACTCGAGTCCAGGCACGCCAGAAATGGCAGCCGGCGAGAGT
CCGCCCAAGTCGACTCGCTACAAGATTGTGACGGAACCGGACACCGTGCT
TAGAGAACCCAGTATACCACTACCCCAGAAGTCCCCAAGATACGCAAGGG
GGGGTTCACCGCCACATCAAGAGCGCCCTATGCCGAAGCCTCCCGTTCGG
AGTAGCACCTACACCTACCCCACAGAACACATGCGCTATGAGTCCGCGGC
TCGTCCCAGTATGTCCCGGCAATCCTCGAGCCGGCCTACGTATGGTGAGA
TCCGTTCGCCCAAGGACAAAGAGTACAGGTATGCGCGAGAGGTGGGGCCA
GATTACATCCCATCCCGCGATGCTTACATGCGACAGCCATACGGGGAGTA
CCCGGTTCCGCCCCCCGAACGGCGGCAATCCACATATGCTGGATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR018253 |
| DBxref | InterPro:IPR036869 |
| DBxref | InterPro:IPR001623 |
| DBxref | PFAM:PF00226 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An18 | supercontig | An18:881215..882940 + |
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