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CBS51388_011046-T1, CBS51388_011046-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_011046-T1
Unique NameCBS51388_011046-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An18:1086671..1088257-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_011046-T1 ID=CBS51388_011046-T1|Name=CBS51388_011046-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1587bp|location=Sequence derived from alignment at An18:1086671..1088257- (Aspergillus niger CBS 513.88)
ATGAACAAAGAACAGTCGTCAGAGAAGCATGATGACTCAAGTCGCACAAT
AACAACAATTTCACTTGGTCACGACTCCATTGTCCCTTCCACTGACTTGT
CAGACAAGGCGCTGTCTAAAAATGACCCAGTCGATAACGGACCGGTAACC
TCAGACACCGAGCAAGCTCAACCACTAGCACCAACAGAAGTTGATGGTGG
TTATGGCTGGGTCTGTGTGGTGTGTGTCTTTTTGGTCAATGCCCATACTT
GGGGCATCAACAGTGTAAGGTCTCATTGCCTCCAGGCAAGTCTTAATTCA
CTAATTTCCTTTGCAAATTAGGCCTACGGTGTTTTCTTGGCCCATTATTT
GGACACGAACACATTCCCAGGTGCATCAGACCTCGACTATGCCTTTGTCG
GAGGCCTCTCTCTCAGTATGGCACAATTCATCGCGCCGGTCGCAACAATC
ACAACCCGAGTATGGGGGACAAGGGCTACCTTGATGATTGGTATTACATT
GCAGACCGCGGCACTATTAGGAGCGTCGTGGGCGGGTCAGATTTGGCAGT
TGTTTCTCAGTCAAGCTCTGTGTTTCGGATTTGGAATGGGAATGCAATTC
AGTGCTACTGTTGGCATCATTCCTCAGTGGTTTACCCGCCGTCGTTCTCT
TGCGAATGGTATTGCAACGGCGGGATCAGGAATTGGAGGCCTTATCTACT
CGTTAGCTACAAGTGCCATGATCCAGAATTTGGGCATTGGATGGGCTTTC
CGTATCCTGGCGATTGTCTCCGCTGCTGCGTGCGGCTTCTCTGCTATCAT
TGTGAAGGATCGAAACAAAGCCATTGGAGCTGTTCAAATCGCCTTCCATA
CCGAGCTTTTGAAAAGACCAGAATTCCTGCTCACTTTGGCCTGGGGTTGT
TTTAGCGTGCTGGGCTACGTGGCCCTTCTGTTCTCCATCCCCGACTACGC
AAGCACTGTAGGCCTGACAGCATCTCAAGGCTCGATTCTTGGTGCCATGT
TCAACCTTGGAGGAGGCCTTGGACGACCTGTTATAGGGTACGTCAGCGAT
AGCTTTGGACGGCTGAACACCGCTCTCGCTTGTACATTTCTGGCGGGCCT
GTTTTCTCTCGTCATCTGGATCTTTGCCAAAAATTTCGGGGTCCTTATCT
TCTACGCTCTGATTAGCGGCCCGGTTGCTGCAACCTTCACGACTACTGTA
GCTCCAGTAGGTGCAGAGGTTGTGGGTTTACAGCTCTTACCATCTGCTTT
GTCGATCTTCTGGCTTTCGGTGGTCATCCCGAGCACATTTGCTGAACCGA
TTGCCCTTTGGCTACGAACTGATAACGAAACCAACTTTCTGCATGCCCAA
GTGTTTGTCGGTTTCATGTTCATGGCAGCATGCATTTGTCTCTGGCTTGT
ACGAGCGTGGAAGGTAGCAGAGTTGGAAAATGCTGCCCCTGACAGCGATC
CTCTAAAAGGTGAAGTCCAAAGTAGGGACAACGATGCCGTGCTCCAAGGG
CCCGTGGCCAGAACAACGAGCAGAGTACCCAGTATGACGAGTAAGGCGAA
GATCGTGAGAAGATTGTTCACGATGGCGAGGGTATAA
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Coding sequence (CDS) from alignment at An18:1086671..1088257-

>CBS51388_011046-T1 ID=CBS51388_011046-T1|Name=CBS51388_011046-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3060bp|location=Sequence derived from alignment at An18:1086671..1088257- (Aspergillus niger CBS 513.88)
GCCTACGGTGTTTTCTTGGCCCATTATTTGGACACGAACACATTCCCAGG
TGCATCAGACCTCGACTATGCCTTTGTCGGAGGCCTCTCTCTCAGTATGG
CACAATTCATCGCGCCGGTCGCAACAATCACAACCCGAGTATGGGGGACA
AGGGCTACCTTGATGATTGGTATTACATTGCAGACCGCGGCACTATTAGG
AGCGTCGTGGGCGGGTCAGATTTGGCAGTTGTTTCTCAGTCAAGCTCTGT
GTTTCGGATTTGGAATGGGAATGCAATTCAGTGCTACTGTTGGCATCATT
CCTCAGTGGTTTACCCGCCGTCGTTCTCTTGCGAATGGTATTGCAACGGC
GGGATCAGGAATTGGAGGCCTTATCTACTCGTTAGCTACAAGTGCCATGA
TCCAGAATTTGGGCATTGGATGGGCTTTCCGTATCCTGGCGATTGTCTCC
GCTGCTGCGTGCGGCTTCTCTGCTATCATTGTGAAGGATCGAAACAAAGC
CATTGGAGCTGTTCAAATCGCCTTCCATACCGAGCTTTTGAAAAGACCAG
AATTCCTGCTCACTTTGGCCTGGGGTTGTTTTAGCGTGCTGGGCTACGTG
GCCCTTCTGTTCTCCATCCCCGACTACGCAAGCACTGTAGGCCTGACAGC
ATCTCAAGGCTCGATTCTTGGTGCCATGTTCAACCTTGGAGGAGGCCTTG
GACGACCTGTTATAGGGTACGTCAGCGATAGCTTTGGACGGCTGAACACC
GCTCTCGCTTGTACATTTCTGGCGGGCCTGTTTTCTCTCGTCATCTGGAT
CTTTGCCAAAAATTTCGGGGTCCTTATCTTCTACGCTCTGATTAGCGGCC
CGGTTGCTGCAACCTTCACGACTACTGTAGCTCCAGTAGGTGCAGAGGTT
GTGGGTTTACAGCTCTTACCATCTGCTTTGTCGATCTTCTGGCTTTCGGT
GGTCATCCCGAGCACATTTGCTGAACCGATTGCCCTTTGGCTACGAACTG
ATAACGAAACCAACTTTCTGCATGCCCAAGTGTTTGTCGGTTTCATGTTC
ATGGCAGCATGCATTTGTCTCTGGCTTGTACGAGCGTGGAAGGTAGCAGA
GTTGGAAAATGCTGCCCCTGACAGCGATCCTCTAAAAGGTGAAGTCCAAA
GTAGGGACAACGATGCCGTGCTCCAAGGGCCCGTGGCCAGAACAACGAGC
AGAGTACCCAGTATGACGAGTAAGGCGAAGATCGTGAGAAGATTGTTCAC
GATGGCGAGGGTATAAATGAACAAAGAACAGTCGTCAGAGAAGCATGATG
ACTCAAGTCGCACAATAACAACAATTTCACTTGGTCACGACTCCATTGTC
CCTTCCACTGACTTGTCAGACAAGGCGCTGTCTAAAAATGACCCAGTCGA
TAACGGACCGGTAACCTCAGACACCGAGCAAGCTCAACCACTAGCACCAA
CAGAAGTTGATGGTGGTTATGGCTGGGTCTGTGTGGTGTGTGTCTTTTTG
GTCAATGCCCATACTTGGGGCATCAACAGTGCCTACGGTGTTTTCTTGGC
CCATTATTTGGACACGAACACATTCCCAGGTGCATCAGACCTCGACTATG
CCTTTGTCGGAGGCCTCTCTCTCAGTATGGCACAATTCATCGCGCCGGTC
GCAACAATCACAACCCGAGTATGGGGGACAAGGGCTACCTTGATGATTGG
TATTACATTGCAGACCGCGGCACTATTAGGAGCGTCGTGGGCGGGTCAGA
TTTGGCAGTTGTTTCTCAGTCAAGCTCTGTGTTTCGGATTTGGAATGGGA
ATGCAATTCAGTGCTACTGTTGGCATCATTCCTCAGTGGTTTACCCGCCG
TCGTTCTCTTGCGAATGGTATTGCAACGGCGGGATCAGGAATTGGAGGCC
TTATCTACTCGTTAGCTACAAGTGCCATGATCCAGAATTTGGGCATTGGA
TGGGCTTTCCGTATCCTGGCGATTGTCTCCGCTGCTGCGTGCGGCTTCTC
TGCTATCATTGTGAAGGATCGAAACAAAGCCATTGGAGCTGTTCAAATCG
CCTTCCATACCGAGCTTTTGAAAAGACCAGAATTCCTGCTCACTTTGGCC
TGGGGTTGTTTTAGCGTGCTGGGCTACGTGGCCCTTCTGTTCTCCATCCC
CGACTACGCAAGCACTGTAGGCCTGACAGCATCTCAAGGCTCGATTCTTG
GTGCCATGTTCAACCTTGGAGGAGGCCTTGGACGACCTGTTATAGGGTAC
GTCAGCGATAGCTTTGGACGGCTGAACACCGCTCTCGCTTGTACATTTCT
GGCGGGCCTGTTTTCTCTCGTCATCTGGATCTTTGCCAAAAATTTCGGGG
TCCTTATCTTCTACGCTCTGATTAGCGGCCCGGTTGCTGCAACCTTCACG
ACTACTGTAGCTCCAGTAGGTGCAGAGGTTGTGGGTTTACAGCTCTTACC
ATCTGCTTTGTCGATCTTCTGGCTTTCGGTGGTCATCCCGAGCACATTTG
CTGAACCGATTGCCCTTTGGCTACGAACTGATAACGAAACCAACTTTCTG
CATGCCCAAGTGTTTGTCGGTTTCATGTTCATGGCAGCATGCATTTGTCT
CTGGCTTGTACGAGCGTGGAAGGTAGCAGAGTTGGAAAATGCTGCCCCTG
ACAGCGATCCTCTAAAAGGTGAAGTCCAAAGTAGGGACAACGATGCCGTG
CTCCAAGGGCCCGTGGCCAGAACAACGAGCAGAGTACCCAGTATGACGAG
TAAGGCGAAGATCGTGAGAAGATTGTTCACGATGGCGAGGGTATAAATGA
ACAAAGAACAGTCGTCAGAGAAGCATGATGACTCAAGTCGCACAATAACA
ACAATTTCACTTGGTCACGACTCCATTGTCCCTTCCACTGACTTGTCAGA
CAAGGCGCTGTCTAAAAATGACCCAGTCGATAACGGACCGGTAACCTCAG
ACACCGAGCAAGCTCAACCACTAGCACCAACAGAAGTTGATGGTGGTTAT
GGCTGGGTCTGTGTGGTGTGTGTCTTTTTGGTCAATGCCCATACTTGGGG
CATCAACAGT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_011046CBS51388_011046Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_011046-T1CBS51388_011046-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_011046-T1.cdsCBS51388_011046-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_011046-T1.exon2CBS51388_011046-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_011046-T1.exon1CBS51388_011046-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An18supercontigAn18:1086671..1088257 -
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