You are here

Home

CBS51388_011138-T1, CBS51388_011138-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_011138-T1
Unique NameCBS51388_011138-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An18:1336534..1337973-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_011138-T1 ID=CBS51388_011138-T1|Name=CBS51388_011138-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1440bp|location=Sequence derived from alignment at An18:1336534..1337973- (Aspergillus niger CBS 513.88)
ATGACAGAAACCCTCCGTCCAGCCTTCGCCGACCGACCGCGGCCTCTCCT
CTCTTACGGCATCCCCTTCTCCTCGTCCGCAGCCCACCATATCACCGACC
TCTTCCACGCCTCCAAAATCTACATCCTCTGCTCCGCCTCCCTCGCCCGC
GACACCGACGCCCTCGACCGTCTCACCCGGGCCCTGGGACCAGACAAAAT
TGCAGGGACCCGCATCGGCATGCAAAGCCACACTCTCTGGTCCGAAGTGC
TAGAAGTAGTCCGCGACGCCCAAGCGGTGGAAGCAGATCTCCTGATTACT
TTGGGCGGGGGGAGTCTAACTGATGCCGCGAAGGTGGTTGCGTTGGTAAT
TTACCCTTCCCTTTTACCTTTCTCATTATCTCATACCCATACTGGTAATA
TAATTTTAATCATTAAAGGCAATATCCAACAACACCACCACCCCATCCAC
CCTCCTTACCTTAACAAGCGAACCACCCACTCCGAACCCGCCCATCAAAC
CCCCCTCCATTCCCATCATCTCCATCCCCACCTCCCTCTCCGCGGGCGAA
TACTCCTCCTTCGCGGGCGCCACGCACGACACTTCACGTCGAAAATACTC
CTTCGGGGCACCGATCCGCGGCCCGCAGCTGGTGATACTTGACCCCGAGC
TGACTGCCACCACTCCCGAACGGATCTGGTTAGGGACGGGGATTCGCGCG
GTGGATCATTGCGTCGAGACGTATCTGTCCTCCGGGGTGGGAAGTAAAGA
TGGGGTTACGGAGGAGACAGATCGATTGGCGTTGCATGCGTTGGGGTTGT
TGATACCTGGGTTGGTGAAGTGTAGGTTAAACAATAAAGATGGGATAGAT
GCAGATGGTGATGGAGGGAAAGCAGCGCGATTGGATTGTGCTTTGGGCAG
TGTGGATGCTATGGCTGCTTGTTCGGCGGGGTTGCCTTTGGGGGCGAGTC
ATGGGATCGGGCATCAGGTTAGTATCCCCTTCTCTCACTCTTTCATATAC
CACAAAGATGTGTATATATATATATGTACTAAACTACATGCGATTGGTAA
TGATAGCTCGGCCCTTTCGGCGTGCCCCACGGCGAAACAAGCTGTATTCT
CCTCCCCGCCGTATGCAAATACAACGCCAAGCACAGCAGCAGCAGCAACA
GCGATGTGATTCCCCGACAGACTAAACTCCGCGACTTCCTGCTCCGGCAG
GAGGGTGTGGCGGGGGTAGTGCGTAAATATTACGCAGACGCAGCAGTTGA
CCTCGGGGATGTGCTGGACGCGGTCATTCGAGAGTTAGGGCTGCCGCGGT
CGTTGCAGGCGGTCGGGGTGGGGCGGGATCAGTTCGATGCGCTGGCGGAA
CATAGTCTGCATGATCGGTGGTGTCAGGCGAATGTGGTGCCGCTGCAGGA
GAAGGGGCAGGTGTTGGAGATTTTGGAGACGGTTGCTTGA
back to top

Coding sequence (CDS) from alignment at An18:1336534..1337973-

>CBS51388_011138-T1 ID=CBS51388_011138-T1|Name=CBS51388_011138-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3834bp|location=Sequence derived from alignment at An18:1336534..1337973- (Aspergillus niger CBS 513.88)
CTCGGCCCTTTCGGCGTGCCCCACGGCGAAACAAGCTGTATTCTCCTCCC
CGCCGTATGCAAATACAACGCCAAGCACAGCAGCAGCAGCAACAGCGATG
TGATTCCCCGACAGACTAAACTCCGCGACTTCCTGCTCCGGCAGGAGGGT
GTGGCGGGGGTAGTGCGTAAATATTACGCAGACGCAGCAGTTGACCTCGG
GGATGTGCTGGACGCGGTCATTCGAGAGTTAGGGCTGCCGCGGTCGTTGC
AGGCGGTCGGGGTGGGGCGGGATCAGTTCGATGCGCTGGCGGAACATAGT
CTGCATGATCGGTGGTGTCAGGCGAATGTGGTGCCGCTGCAGGAGAAGGG
GCAGGTGTTGGAGATTTTGGAGACGGTTGCTTGAGCAATATCCAACAACA
CCACCACCCCATCCACCCTCCTTACCTTAACAAGCGAACCACCCACTCCG
AACCCGCCCATCAAACCCCCCTCCATTCCCATCATCTCCATCCCCACCTC
CCTCTCCGCGGGCGAATACTCCTCCTTCGCGGGCGCCACGCACGACACTT
CACGTCGAAAATACTCCTTCGGGGCACCGATCCGCGGCCCGCAGCTGGTG
ATACTTGACCCCGAGCTGACTGCCACCACTCCCGAACGGATCTGGTTAGG
GACGGGGATTCGCGCGGTGGATCATTGCGTCGAGACGTATCTGTCCTCCG
GGGTGGGAAGTAAAGATGGGGTTACGGAGGAGACAGATCGATTGGCGTTG
CATGCGTTGGGGTTGTTGATACCTGGGTTGGTGAAGTGTAGGTTAAACAA
TAAAGATGGGATAGATGCAGATGGTGATGGAGGGAAAGCAGCGCGATTGG
ATTGTGCTTTGGGCAGTGTGGATGCTATGGCTGCTTGTTCGGCGGGGTTG
CCTTTGGGGGCGAGTCATGGGATCGGGCATCAGATGACAGAAACCCTCCG
TCCAGCCTTCGCCGACCGACCGCGGCCTCTCCTCTCTTACGGCATCCCCT
TCTCCTCGTCCGCAGCCCACCATATCACCGACCTCTTCCACGCCTCCAAA
ATCTACATCCTCTGCTCCGCCTCCCTCGCCCGCGACACCGACGCCCTCGA
CCGTCTCACCCGGGCCCTGGGACCAGACAAAATTGCAGGGACCCGCATCG
GCATGCAAAGCCACACTCTCTGGTCCGAAGTGCTAGAAGTAGTCCGCGAC
GCCCAAGCGGTGGAAGCAGATCTCCTGATTACTTTGGGCGGGGGGAGTCT
AACTGATGCCGCGAAGGTGGTTGCGTTGCTCGGCCCTTTCGGCGTGCCCC
ACGGCGAAACAAGCTGTATTCTCCTCCCCGCCGTATGCAAATACAACGCC
AAGCACAGCAGCAGCAGCAACAGCGATGTGATTCCCCGACAGACTAAACT
CCGCGACTTCCTGCTCCGGCAGGAGGGTGTGGCGGGGGTAGTGCGTAAAT
ATTACGCAGACGCAGCAGTTGACCTCGGGGATGTGCTGGACGCGGTCATT
CGAGAGTTAGGGCTGCCGCGGTCGTTGCAGGCGGTCGGGGTGGGGCGGGA
TCAGTTCGATGCGCTGGCGGAACATAGTCTGCATGATCGGTGGTGTCAGG
CGAATGTGGTGCCGCTGCAGGAGAAGGGGCAGGTGTTGGAGATTTTGGAG
ACGGTTGCTTGAGCAATATCCAACAACACCACCACCCCATCCACCCTCCT
TACCTTAACAAGCGAACCACCCACTCCGAACCCGCCCATCAAACCCCCCT
CCATTCCCATCATCTCCATCCCCACCTCCCTCTCCGCGGGCGAATACTCC
TCCTTCGCGGGCGCCACGCACGACACTTCACGTCGAAAATACTCCTTCGG
GGCACCGATCCGCGGCCCGCAGCTGGTGATACTTGACCCCGAGCTGACTG
CCACCACTCCCGAACGGATCTGGTTAGGGACGGGGATTCGCGCGGTGGAT
CATTGCGTCGAGACGTATCTGTCCTCCGGGGTGGGAAGTAAAGATGGGGT
TACGGAGGAGACAGATCGATTGGCGTTGCATGCGTTGGGGTTGTTGATAC
CTGGGTTGGTGAAGTGTAGGTTAAACAATAAAGATGGGATAGATGCAGAT
GGTGATGGAGGGAAAGCAGCGCGATTGGATTGTGCTTTGGGCAGTGTGGA
TGCTATGGCTGCTTGTTCGGCGGGGTTGCCTTTGGGGGCGAGTCATGGGA
TCGGGCATCAGATGACAGAAACCCTCCGTCCAGCCTTCGCCGACCGACCG
CGGCCTCTCCTCTCTTACGGCATCCCCTTCTCCTCGTCCGCAGCCCACCA
TATCACCGACCTCTTCCACGCCTCCAAAATCTACATCCTCTGCTCCGCCT
CCCTCGCCCGCGACACCGACGCCCTCGACCGTCTCACCCGGGCCCTGGGA
CCAGACAAAATTGCAGGGACCCGCATCGGCATGCAAAGCCACACTCTCTG
GTCCGAAGTGCTAGAAGTAGTCCGCGACGCCCAAGCGGTGGAAGCAGATC
TCCTGATTACTTTGGGCGGGGGGAGTCTAACTGATGCCGCGAAGGTGGTT
GCGTTGCTCGGCCCTTTCGGCGTGCCCCACGGCGAAACAAGCTGTATTCT
CCTCCCCGCCGTATGCAAATACAACGCCAAGCACAGCAGCAGCAGCAACA
GCGATGTGATTCCCCGACAGACTAAACTCCGCGACTTCCTGCTCCGGCAG
GAGGGTGTGGCGGGGGTAGTGCGTAAATATTACGCAGACGCAGCAGTTGA
CCTCGGGGATGTGCTGGACGCGGTCATTCGAGAGTTAGGGCTGCCGCGGT
CGTTGCAGGCGGTCGGGGTGGGGCGGGATCAGTTCGATGCGCTGGCGGAA
CATAGTCTGCATGATCGGTGGTGTCAGGCGAATGTGGTGCCGCTGCAGGA
GAAGGGGCAGGTGTTGGAGATTTTGGAGACGGTTGCTTGAGCAATATCCA
ACAACACCACCACCCCATCCACCCTCCTTACCTTAACAAGCGAACCACCC
ACTCCGAACCCGCCCATCAAACCCCCCTCCATTCCCATCATCTCCATCCC
CACCTCCCTCTCCGCGGGCGAATACTCCTCCTTCGCGGGCGCCACGCACG
ACACTTCACGTCGAAAATACTCCTTCGGGGCACCGATCCGCGGCCCGCAG
CTGGTGATACTTGACCCCGAGCTGACTGCCACCACTCCCGAACGGATCTG
GTTAGGGACGGGGATTCGCGCGGTGGATCATTGCGTCGAGACGTATCTGT
CCTCCGGGGTGGGAAGTAAAGATGGGGTTACGGAGGAGACAGATCGATTG
GCGTTGCATGCGTTGGGGTTGTTGATACCTGGGTTGGTGAAGTGTAGGTT
AAACAATAAAGATGGGATAGATGCAGATGGTGATGGAGGGAAAGCAGCGC
GATTGGATTGTGCTTTGGGCAGTGTGGATGCTATGGCTGCTTGTTCGGCG
GGGTTGCCTTTGGGGGCGAGTCATGGGATCGGGCATCAGATGACAGAAAC
CCTCCGTCCAGCCTTCGCCGACCGACCGCGGCCTCTCCTCTCTTACGGCA
TCCCCTTCTCCTCGTCCGCAGCCCACCATATCACCGACCTCTTCCACGCC
TCCAAAATCTACATCCTCTGCTCCGCCTCCCTCGCCCGCGACACCGACGC
CCTCGACCGTCTCACCCGGGCCCTGGGACCAGACAAAATTGCAGGGACCC
GCATCGGCATGCAAAGCCACACTCTCTGGTCCGAAGTGCTAGAAGTAGTC
CGCGACGCCCAAGCGGTGGAAGCAGATCTCCTGATTACTTTGGGCGGGGG
GAGTCTAACTGATGCCGCGAAGGTGGTTGCGTTG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_011138CBS51388_011138Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_011138-T1CBS51388_011138-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_011138-T1.cdsCBS51388_011138-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_011138-T1.exon3CBS51388_011138-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_011138-T1.exon2CBS51388_011138-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_011138-T1.exon1CBS51388_011138-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR001670
DBxrefPFAM:PF00465
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An18supercontigAn18:1336534..1337973 -
Powered by Drupal