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Sequences
The following sequences are available for this feature:
mRNA from alignment at An18:1519754..1520598- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_011200-T1 ID=CBS51388_011200-T1|Name=CBS51388_011200-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=845bp|location=Sequence derived from alignment at An18:1519754..1520598- (Aspergillus niger CBS 513.88)
ATGTGGATCCTACCCTTGGTAGGGTATTTGGGGGTCATTGTCGGGTTCGC
TTTCCTTACCTTAGCGATAGGTATGATATGCCCGCAATGCGCGCGATGAT
GATGACGACGACTGGTCTTGCTCTCGTCACCATAGACAATAGGACGAGAT
GCCAAGCTCACATGACTTGTGATATTATCTGTATTCATCAGGCTGACCTG
TTTCTAGCCTCCGGCCTTTACTACCTCTCGGAGCTTGTGGAGGAGCATAC
AGTTCTTGCCCGTCGGCTGTTGTACCGGCTGATATACAGCATCATCGCCG
TTCAGATCCTCCTCTACGTATTTGACCGATTTCCTTTCTCCTTGACCGCC
CTCAGCATCGGCTCGCATATCGTATATGCCAGCAATCTCCGCCGGTTCCC
CATAGTCAAGTTGTCCGACCCTCTCTTCATCCTGTCATGTGGGCTCGTCG
GTTTGAATCATTGGCTTTGGTTTCGCCATTTTTCACAGCCATTACCTTCA
TCGCGCGGCGCCACAAGCTGGCGCCAGCCGTATCAGATTAATGTGGAGGA
TATGCCCACCTTCACGGAGGTTGCGTCTTACTTTGGACTCTGTGTCTGGC
TGGTACCATTTGCGCTCTTCGTCAGCCTCAGCGCGGGCGATAATGTCTTG
CCTACTATGGGCTCCGAGTATGCCACAGGTGACCGTGTGCCTACTTCGGG
GTTTACCCCGGGTACGTTTTCGTCCGATGGCAAGTCCAAGAACAAGGGAA
TGGCCAAGGCCCTGGTGGATGGTGTGCGGGACTGGGTTAAGGATAACGGG
GAATTGATGGGTTTCTGGAAAGGTGAACGGGCAAAAGGCTTCTAG back to topCoding sequence (CDS) from alignment at An18:1519754..1520598- >CBS51388_011200-T1 ID=CBS51388_011200-T1|Name=CBS51388_011200-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1416bp|location=Sequence derived from alignment at An18:1519754..1520598- (Aspergillus niger CBS 513.88)
CCTCCGGCCTTTACTACCTCTCGGAGCTTGTGGAGGAGCATACAGTTCTT
GCCCGTCGGCTGTTGTACCGGCTGATATACAGCATCATCGCCGTTCAGAT
CCTCCTCTACGTATTTGACCGATTTCCTTTCTCCTTGACCGCCCTCAGCA
TCGGCTCGCATATCGTATATGCCAGCAATCTCCGCCGGTTCCCCATAGTC
AAGTTGTCCGACCCTCTCTTCATCCTGTCATGTGGGCTCGTCGGTTTGAA
TCATTGGCTTTGGTTTCGCCATTTTTCACAGCCATTACCTTCATCGCGCG
GCGCCACAAGCTGGCGCCAGCCGTATCAGATTAATGTGGAGGATATGCCC
ACCTTCACGGAGGTTGCGTCTTACTTTGGACTCTGTGTCTGGCTGGTACC
ATTTGCGCTCTTCGTCAGCCTCAGCGCGGGCGATAATGTCTTGCCTACTA
TGGGCTCCGAGTATGCCACAGGTGACCGTGTGCCTACTTCGGGGTTTACC
CCGGGTACGTTTTCGTCCGATGGCAAGTCCAAGAACAAGGGAATGGCCAA
GGCCCTGGTGGATGGTGTGCGGGACTGGGTTAAGGATAACGGGGAATTGA
TGGGTTTCTGGAAAGGTGAACGGGCAAAAGGCTTCTAGATGTGGATCCTA
CCCTTGGTAGGGTATTTGGGGGTCATTGTCGGGTTCGCTTTCCTTACCTT
AGCGATAGCCTCCGGCCTTTACTACCTCTCGGAGCTTGTGGAGGAGCATA
CAGTTCTTGCCCGTCGGCTGTTGTACCGGCTGATATACAGCATCATCGCC
GTTCAGATCCTCCTCTACGTATTTGACCGATTTCCTTTCTCCTTGACCGC
CCTCAGCATCGGCTCGCATATCGTATATGCCAGCAATCTCCGCCGGTTCC
CCATAGTCAAGTTGTCCGACCCTCTCTTCATCCTGTCATGTGGGCTCGTC
GGTTTGAATCATTGGCTTTGGTTTCGCCATTTTTCACAGCCATTACCTTC
ATCGCGCGGCGCCACAAGCTGGCGCCAGCCGTATCAGATTAATGTGGAGG
ATATGCCCACCTTCACGGAGGTTGCGTCTTACTTTGGACTCTGTGTCTGG
CTGGTACCATTTGCGCTCTTCGTCAGCCTCAGCGCGGGCGATAATGTCTT
GCCTACTATGGGCTCCGAGTATGCCACAGGTGACCGTGTGCCTACTTCGG
GGTTTACCCCGGGTACGTTTTCGTCCGATGGCAAGTCCAAGAACAAGGGA
ATGGCCAAGGCCCTGGTGGATGGTGTGCGGGACTGGGTTAAGGATAACGG
GGAATTGATGGGTTTCTGGAAAGGTGAACGGGCAAAAGGCTTCTAGATGT
GGATCCTACCCTTGGTAGGGTATTTGGGGGTCATTGTCGGGTTCGCTTTC
CTTACCTTAGCGATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0097020 | COPII adaptor activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007277 |
| DBxref | PFAM:PF04148 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An18 | supercontig | An18:1519754..1520598 - |
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