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ATCC10864_000513-T1, ATCC10864_000513-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_000513-T1
Unique NameATCC10864_000513-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000014:8776..10727-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_000513-T1 ID=ATCC10864_000513-T1|Name=ATCC10864_000513-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1952bp|location=Sequence derived from alignment at MCQH01000014:8776..10727- (Aspergillus niger ATCC 10864)
ATGGCCAGCCATATCATCGGCAACCGCAACAGCACGCCTGAAGCCTCCAA
GTCCAGTCTTCGTCCTCCATCGTCGTCTCGGAATCTAGGATCGCACCAGC
TTCGTGCATCGGCCGATATGTCGGGCTTCCCATCTCCTCTGTCATCCCGC
AGCATCCGTCCTTCCTCGGAAGTCTACTTCAATCAGCAGTCGCAGGCGTC
GAACAACGCGGAGGATCCGTTGGACCGTGCGGCTCAGCAGTGGCTCGCGG
ATATTGATCAGTACGAGACTACATTGGAAGAAATGGCCGCTGCCACGCTG
GACCAGGATTTCAAGGATGAGCTTAGCGCCATCGAGCAGTGGTTCCGGGT
TCTCAGCGAGGCGGAGAGGACTGCTGCCCTTTACGCTCTGTTGCAGCAGA
CCACTCAGGTGCAGATTCGTTTCTTCATTCAGGTCTTGCAGCAGATGGCC
AAGAGCCATCCCATGTCGGGACTGTTGTCTCCGGCCAACTTTGGCGAGAA
GGGTAAGTTGCATATCAAACCAGGCAAGCGTGACAGGTATTAACAATAAT
ATTTTGCCAGATGCCATGTCTAACCGCTTGAACGATGCCATGTCCAAGTT
GAACGTGGACAGCTCCCGGAGCTCCCTCGGTCGCCCCCCGCCGTCCCCCG
GTGCTAAGCGCAACTCCGGACTCGACTCGTCCACCATTAATGCCATGTTC
CCTGATGCTGCTGCGGCAATTGCAAAGAAGAAGGCCGAGTTCACCCAGCA
AACGGGCAATGCTCCTCCCTCGAACCGGAACAGCGCTGTTTTCGATCGGA
CTTCCTTTGTGGCACCCACCATTTCGGCCCCAGACAACAGCAACGACACC
TTGGGCCAGCCTCCGGTTTCACCCTGGGCCCAGCGCGGATCTGAGCCGCA
ACCCCCTATCGCCCGTCCCAAGTCTTCGTCCGGTCATCAGCCCATGGGCC
AATTCAGCCAGACTCCTTCGAGCCTGCGCTCTCCGCTCCCTACCCAAACC
GCCACGATTCCTGCCCCCGAGATTGATGCTCCTTTGCTCTCGCCGTACAA
TGTTGGAAATGCCAGCTGGGCCTCCATGACCAACACCCCCATGACGGCGA
CCTTTGGCCAGCAGCCGCAGCAGCCCCAGCAGAATTCGCAGGCCGATATG
GTGGCCAACGCGACTGCGATGAAGCTGGCCGCACTGTCGACCGTCAACAA
CCGCATTGCACTTGATGATGCTCGCAAGTACCGTCGGGCTCGCTCCAACG
ATGGCCAGGGTAAGAACTCGGCCAACAGCCACGCCATGTCTCAGGGTGGC
CTGGCCAGCCCGGGCCTCCCGGGCCACAGTCACCTTGTTGCCGGACAGCT
GTTGAACACTCAGCAGCTGGCGGCTTTGCAGGCACAGCAACAGGCTGCGA
TGGCGGGTCGTCGCTCCCGCCCGACGTCGCCTGGAATCGCCATGCAGGGT
GCTGGCGGACTTGGTCCGATGGGCTTCACTTCGCCGCAGAACAACGGCTT
CTTGGCAGCATATGACCCGAACAACCCGCTCATGGGTAACGGCCTGGGTG
CACTTGGTATCGGGCAGTTTGGCCTGGGAGGTCCTGAGGGCTACCTCTCA
GACCACTCGGAAGTGGCTCGCGGCCGGTCCCCGCGTGGTCGTCGCGGTAG
CTCGAAGCCGCCGGAGGACCCCACGGACCCTAACCTCTTGAAGGACATTC
CCAGCTGGCTGAGATCGCTGCGGCTGCACAAGTACACGGAAAACCTGAAG
GACTTGAAATGGACGGAGCTGGTCGAATTGAACGACAAGGCGCTGGAAGA
CCGCGGCGTCAATGCTCTTGGTGCCAGAAACAAAATGCTCAAGGTGAGTT
ACATAAACTCTCCAAGGTGTTTAGACATCATGCTAATCTTTGTAGGTTTT
TGAACAAGTCAGAGAAGCCAAAGCCGAGGGCAAGCTCGACAACATTGCGT
GA
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Coding sequence (CDS) from alignment at MCQH01000014:8776..10727-

>ATCC10864_000513-T1 ID=ATCC10864_000513-T1|Name=ATCC10864_000513-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=5526bp|location=Sequence derived from alignment at MCQH01000014:8776..10727- (Aspergillus niger ATCC 10864)
GTTTTTGAACAAGTCAGAGAAGCCAAAGCCGAGGGCAAGCTCGACAACAT
TGCGTGAATGCCATGTCTAACCGCTTGAACGATGCCATGTCCAAGTTGAA
CGTGGACAGCTCCCGGAGCTCCCTCGGTCGCCCCCCGCCGTCCCCCGGTG
CTAAGCGCAACTCCGGACTCGACTCGTCCACCATTAATGCCATGTTCCCT
GATGCTGCTGCGGCAATTGCAAAGAAGAAGGCCGAGTTCACCCAGCAAAC
GGGCAATGCTCCTCCCTCGAACCGGAACAGCGCTGTTTTCGATCGGACTT
CCTTTGTGGCACCCACCATTTCGGCCCCAGACAACAGCAACGACACCTTG
GGCCAGCCTCCGGTTTCACCCTGGGCCCAGCGCGGATCTGAGCCGCAACC
CCCTATCGCCCGTCCCAAGTCTTCGTCCGGTCATCAGCCCATGGGCCAAT
TCAGCCAGACTCCTTCGAGCCTGCGCTCTCCGCTCCCTACCCAAACCGCC
ACGATTCCTGCCCCCGAGATTGATGCTCCTTTGCTCTCGCCGTACAATGT
TGGAAATGCCAGCTGGGCCTCCATGACCAACACCCCCATGACGGCGACCT
TTGGCCAGCAGCCGCAGCAGCCCCAGCAGAATTCGCAGGCCGATATGGTG
GCCAACGCGACTGCGATGAAGCTGGCCGCACTGTCGACCGTCAACAACCG
CATTGCACTTGATGATGCTCGCAAGTACCGTCGGGCTCGCTCCAACGATG
GCCAGGGTAAGAACTCGGCCAACAGCCACGCCATGTCTCAGGGTGGCCTG
GCCAGCCCGGGCCTCCCGGGCCACAGTCACCTTGTTGCCGGACAGCTGTT
GAACACTCAGCAGCTGGCGGCTTTGCAGGCACAGCAACAGGCTGCGATGG
CGGGTCGTCGCTCCCGCCCGACGTCGCCTGGAATCGCCATGCAGGGTGCT
GGCGGACTTGGTCCGATGGGCTTCACTTCGCCGCAGAACAACGGCTTCTT
GGCAGCATATGACCCGAACAACCCGCTCATGGGTAACGGCCTGGGTGCAC
TTGGTATCGGGCAGTTTGGCCTGGGAGGTCCTGAGGGCTACCTCTCAGAC
CACTCGGAAGTGGCTCGCGGCCGGTCCCCGCGTGGTCGTCGCGGTAGCTC
GAAGCCGCCGGAGGACCCCACGGACCCTAACCTCTTGAAGGACATTCCCA
GCTGGCTGAGATCGCTGCGGCTGCACAAGTACACGGAAAACCTGAAGGAC
TTGAAATGGACGGAGCTGGTCGAATTGAACGACAAGGCGCTGGAAGACCG
CGGCGTCAATGCTCTTGGTGCCAGAAACAAAATGCTCAAGATGGCCAGCC
ATATCATCGGCAACCGCAACAGCACGCCTGAAGCCTCCAAGTCCAGTCTT
CGTCCTCCATCGTCGTCTCGGAATCTAGGATCGCACCAGCTTCGTGCATC
GGCCGATATGTCGGGCTTCCCATCTCCTCTGTCATCCCGCAGCATCCGTC
CTTCCTCGGAAGTCTACTTCAATCAGCAGTCGCAGGCGTCGAACAACGCG
GAGGATCCGTTGGACCGTGCGGCTCAGCAGTGGCTCGCGGATATTGATCA
GTACGAGACTACATTGGAAGAAATGGCCGCTGCCACGCTGGACCAGGATT
TCAAGGATGAGCTTAGCGCCATCGAGCAGTGGTTCCGGGTTCTCAGCGAG
GCGGAGAGGACTGCTGCCCTTTACGCTCTGTTGCAGCAGACCACTCAGGT
GCAGATTCGTTTCTTCATTCAGGTCTTGCAGCAGATGGCCAAGAGCCATC
CCATGTCGGGACTGTTGTCTCCGGCCAACTTTGGCGAGAAGGGTTTTTGA
ACAAGTCAGAGAAGCCAAAGCCGAGGGCAAGCTCGACAACATTGCGTGAA
TGCCATGTCTAACCGCTTGAACGATGCCATGTCCAAGTTGAACGTGGACA
GCTCCCGGAGCTCCCTCGGTCGCCCCCCGCCGTCCCCCGGTGCTAAGCGC
AACTCCGGACTCGACTCGTCCACCATTAATGCCATGTTCCCTGATGCTGC
TGCGGCAATTGCAAAGAAGAAGGCCGAGTTCACCCAGCAAACGGGCAATG
CTCCTCCCTCGAACCGGAACAGCGCTGTTTTCGATCGGACTTCCTTTGTG
GCACCCACCATTTCGGCCCCAGACAACAGCAACGACACCTTGGGCCAGCC
TCCGGTTTCACCCTGGGCCCAGCGCGGATCTGAGCCGCAACCCCCTATCG
CCCGTCCCAAGTCTTCGTCCGGTCATCAGCCCATGGGCCAATTCAGCCAG
ACTCCTTCGAGCCTGCGCTCTCCGCTCCCTACCCAAACCGCCACGATTCC
TGCCCCCGAGATTGATGCTCCTTTGCTCTCGCCGTACAATGTTGGAAATG
CCAGCTGGGCCTCCATGACCAACACCCCCATGACGGCGACCTTTGGCCAG
CAGCCGCAGCAGCCCCAGCAGAATTCGCAGGCCGATATGGTGGCCAACGC
GACTGCGATGAAGCTGGCCGCACTGTCGACCGTCAACAACCGCATTGCAC
TTGATGATGCTCGCAAGTACCGTCGGGCTCGCTCCAACGATGGCCAGGGT
AAGAACTCGGCCAACAGCCACGCCATGTCTCAGGGTGGCCTGGCCAGCCC
GGGCCTCCCGGGCCACAGTCACCTTGTTGCCGGACAGCTGTTGAACACTC
AGCAGCTGGCGGCTTTGCAGGCACAGCAACAGGCTGCGATGGCGGGTCGT
CGCTCCCGCCCGACGTCGCCTGGAATCGCCATGCAGGGTGCTGGCGGACT
TGGTCCGATGGGCTTCACTTCGCCGCAGAACAACGGCTTCTTGGCAGCAT
ATGACCCGAACAACCCGCTCATGGGTAACGGCCTGGGTGCACTTGGTATC
GGGCAGTTTGGCCTGGGAGGTCCTGAGGGCTACCTCTCAGACCACTCGGA
AGTGGCTCGCGGCCGGTCCCCGCGTGGTCGTCGCGGTAGCTCGAAGCCGC
CGGAGGACCCCACGGACCCTAACCTCTTGAAGGACATTCCCAGCTGGCTG
AGATCGCTGCGGCTGCACAAGTACACGGAAAACCTGAAGGACTTGAAATG
GACGGAGCTGGTCGAATTGAACGACAAGGCGCTGGAAGACCGCGGCGTCA
ATGCTCTTGGTGCCAGAAACAAAATGCTCAAGATGGCCAGCCATATCATC
GGCAACCGCAACAGCACGCCTGAAGCCTCCAAGTCCAGTCTTCGTCCTCC
ATCGTCGTCTCGGAATCTAGGATCGCACCAGCTTCGTGCATCGGCCGATA
TGTCGGGCTTCCCATCTCCTCTGTCATCCCGCAGCATCCGTCCTTCCTCG
GAAGTCTACTTCAATCAGCAGTCGCAGGCGTCGAACAACGCGGAGGATCC
GTTGGACCGTGCGGCTCAGCAGTGGCTCGCGGATATTGATCAGTACGAGA
CTACATTGGAAGAAATGGCCGCTGCCACGCTGGACCAGGATTTCAAGGAT
GAGCTTAGCGCCATCGAGCAGTGGTTCCGGGTTCTCAGCGAGGCGGAGAG
GACTGCTGCCCTTTACGCTCTGTTGCAGCAGACCACTCAGGTGCAGATTC
GTTTCTTCATTCAGGTCTTGCAGCAGATGGCCAAGAGCCATCCCATGTCG
GGACTGTTGTCTCCGGCCAACTTTGGCGAGAAGGGTTTTTGAACAAGTCA
GAGAAGCCAAAGCCGAGGGCAAGCTCGACAACATTGCGTGAATGCCATGT
CTAACCGCTTGAACGATGCCATGTCCAAGTTGAACGTGGACAGCTCCCGG
AGCTCCCTCGGTCGCCCCCCGCCGTCCCCCGGTGCTAAGCGCAACTCCGG
ACTCGACTCGTCCACCATTAATGCCATGTTCCCTGATGCTGCTGCGGCAA
TTGCAAAGAAGAAGGCCGAGTTCACCCAGCAAACGGGCAATGCTCCTCCC
TCGAACCGGAACAGCGCTGTTTTCGATCGGACTTCCTTTGTGGCACCCAC
CATTTCGGCCCCAGACAACAGCAACGACACCTTGGGCCAGCCTCCGGTTT
CACCCTGGGCCCAGCGCGGATCTGAGCCGCAACCCCCTATCGCCCGTCCC
AAGTCTTCGTCCGGTCATCAGCCCATGGGCCAATTCAGCCAGACTCCTTC
GAGCCTGCGCTCTCCGCTCCCTACCCAAACCGCCACGATTCCTGCCCCCG
AGATTGATGCTCCTTTGCTCTCGCCGTACAATGTTGGAAATGCCAGCTGG
GCCTCCATGACCAACACCCCCATGACGGCGACCTTTGGCCAGCAGCCGCA
GCAGCCCCAGCAGAATTCGCAGGCCGATATGGTGGCCAACGCGACTGCGA
TGAAGCTGGCCGCACTGTCGACCGTCAACAACCGCATTGCACTTGATGAT
GCTCGCAAGTACCGTCGGGCTCGCTCCAACGATGGCCAGGGTAAGAACTC
GGCCAACAGCCACGCCATGTCTCAGGGTGGCCTGGCCAGCCCGGGCCTCC
CGGGCCACAGTCACCTTGTTGCCGGACAGCTGTTGAACACTCAGCAGCTG
GCGGCTTTGCAGGCACAGCAACAGGCTGCGATGGCGGGTCGTCGCTCCCG
CCCGACGTCGCCTGGAATCGCCATGCAGGGTGCTGGCGGACTTGGTCCGA
TGGGCTTCACTTCGCCGCAGAACAACGGCTTCTTGGCAGCATATGACCCG
AACAACCCGCTCATGGGTAACGGCCTGGGTGCACTTGGTATCGGGCAGTT
TGGCCTGGGAGGTCCTGAGGGCTACCTCTCAGACCACTCGGAAGTGGCTC
GCGGCCGGTCCCCGCGTGGTCGTCGCGGTAGCTCGAAGCCGCCGGAGGAC
CCCACGGACCCTAACCTCTTGAAGGACATTCCCAGCTGGCTGAGATCGCT
GCGGCTGCACAAGTACACGGAAAACCTGAAGGACTTGAAATGGACGGAGC
TGGTCGAATTGAACGACAAGGCGCTGGAAGACCGCGGCGTCAATGCTCTT
GGTGCCAGAAACAAAATGCTCAAGATGGCCAGCCATATCATCGGCAACCG
CAACAGCACGCCTGAAGCCTCCAAGTCCAGTCTTCGTCCTCCATCGTCGT
CTCGGAATCTAGGATCGCACCAGCTTCGTGCATCGGCCGATATGTCGGGC
TTCCCATCTCCTCTGTCATCCCGCAGCATCCGTCCTTCCTCGGAAGTCTA
CTTCAATCAGCAGTCGCAGGCGTCGAACAACGCGGAGGATCCGTTGGACC
GTGCGGCTCAGCAGTGGCTCGCGGATATTGATCAGTACGAGACTACATTG
GAAGAAATGGCCGCTGCCACGCTGGACCAGGATTTCAAGGATGAGCTTAG
CGCCATCGAGCAGTGGTTCCGGGTTCTCAGCGAGGCGGAGAGGACTGCTG
CCCTTTACGCTCTGTTGCAGCAGACCACTCAGGTGCAGATTCGTTTCTTC
ATTCAGGTCTTGCAGCAGATGGCCAAGAGCCATCCCATGTCGGGACTGTT
GTCTCCGGCCAACTTTGGCGAGAAGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0043488regulation of mRNA stability
Vocabulary: Molecular Function
TermDefinition
GO:0003729mRNA binding
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
VTS1ATCC10864_000513Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000513-T1ATCC10864_000513-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000513-T1.cdsATCC10864_000513-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000513-T1.exon3ATCC10864_000513-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_000513-T1.exon2ATCC10864_000513-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_000513-T1.exon1ATCC10864_000513-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR001660
InterProIPR013761
InterProIPR037635
PFAMPF07647
Properties
Property NameValue
ProductFlap-structured DNA-binding and RNA-binding protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000014supercontigMCQH01000014:8776..10727 -
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