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ATCC10864_002880-T1, ATCC10864_002880-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_002880-T1
Unique NameATCC10864_002880-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000054:56410..57525+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_002880-T1 ID=ATCC10864_002880-T1|Name=ATCC10864_002880-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1116bp|location=Sequence derived from alignment at MCQH01000054:56410..57525+ (Aspergillus niger ATCC 10864)
ATGATTGGCTCCTCATCACCATCTACAACTGTCAGCCTGGCGGACAACAT
CTCCAGAACTACAAGCCGTCGAAAGACTCGTGACAGCTGCGACGGCTGTG
CCAAATCCAAAGTGCGCTGTGGAAAACAGCATCCTAGATGTGATCGCTGC
GTGGCGAGGAAGCAAGCTTGCAATTACGGGCTCATTCGACCCAAAGGACG
ACCACGACTCTCTCATCGCTCACCTAGCCTCCCTGCTGTGAAATCTCAAC
CCTGCTCGCCAGATCCGTGTATTGGTCTGGACCTGCTGTCTACGTCTTAC
GATCCCGAATCAACAGCAGACAGTCATATCTACTGCTCGCCAGAAACCAA
AATCACATCTACAACAAGTCATTTATCCTGTGACATCCAAAACCTGGGTG
ACTGGAAATTCCTGGATCACGAGCTCAACCTCCCGTTTGACATAACCACA
CCTCAGTCGACCTTCACTTCAGAAACTGTGCAGTCAGACAACCAGATGGA
CTCAGTACTAAGTCCCACCTTATCTTTACTACACTCCTCACGCGCATCTT
CCCCTTGCTCAAACGACAACACTTGGCACGTCTCCACTTGTCTCCCAATG
ATCGTGGAGACACTTGGAAGACTTGATTATCCGCTTGAGTATTATATCCG
ACAAGTGGATGTGTCTCAATTGCTCAGCCTTGATACAGTCCTACGACTCA
ATGAAGACGCTGTGAGCAACTTTTCTGCGGTGCTAGAGTGCCATTGCCGC
GTCGCATCTCTTTTTGCCCCGTCGATCGCCGAAGCAATAACTAAGATCCT
CACTTGGTATGCTGGAATTATCAGCGACTGCAAAGTCTTTACTTCTCATT
CAAGTTGCACATTTGTGGAGTTCCCTCCAATCAAGATCGGAGAGTTCGAA
CTGGGCAAGAGTGATTCTAAACGGATGGTGATCCAGGTAGTAATGACTGG
ATTGAACAAAGTACAAGCGCTGGTGCAAATATTCGCTTGCCGTTACTGTC
GCCACGATGACCTCGCAAATGACAATTCAATGTCGATCTGTCTCGCCTTG
GAGGCACGATTGCGAGGGGAATTGAATGATATCAGAAACTATGCGGTGTT
GGCAATGGCTGGTTAG
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Coding sequence (CDS) from alignment at MCQH01000054:56410..57525+

>ATCC10864_002880-T1 ID=ATCC10864_002880-T1|Name=ATCC10864_002880-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1116bp|location=Sequence derived from alignment at MCQH01000054:56410..57525+ (Aspergillus niger ATCC 10864)
ATGATTGGCTCCTCATCACCATCTACAACTGTCAGCCTGGCGGACAACAT
CTCCAGAACTACAAGCCGTCGAAAGACTCGTGACAGCTGCGACGGCTGTG
CCAAATCCAAAGTGCGCTGTGGAAAACAGCATCCTAGATGTGATCGCTGC
GTGGCGAGGAAGCAAGCTTGCAATTACGGGCTCATTCGACCCAAAGGACG
ACCACGACTCTCTCATCGCTCACCTAGCCTCCCTGCTGTGAAATCTCAAC
CCTGCTCGCCAGATCCGTGTATTGGTCTGGACCTGCTGTCTACGTCTTAC
GATCCCGAATCAACAGCAGACAGTCATATCTACTGCTCGCCAGAAACCAA
AATCACATCTACAACAAGTCATTTATCCTGTGACATCCAAAACCTGGGTG
ACTGGAAATTCCTGGATCACGAGCTCAACCTCCCGTTTGACATAACCACA
CCTCAGTCGACCTTCACTTCAGAAACTGTGCAGTCAGACAACCAGATGGA
CTCAGTACTAAGTCCCACCTTATCTTTACTACACTCCTCACGCGCATCTT
CCCCTTGCTCAAACGACAACACTTGGCACGTCTCCACTTGTCTCCCAATG
ATCGTGGAGACACTTGGAAGACTTGATTATCCGCTTGAGTATTATATCCG
ACAAGTGGATGTGTCTCAATTGCTCAGCCTTGATACAGTCCTACGACTCA
ATGAAGACGCTGTGAGCAACTTTTCTGCGGTGCTAGAGTGCCATTGCCGC
GTCGCATCTCTTTTTGCCCCGTCGATCGCCGAAGCAATAACTAAGATCCT
CACTTGGTATGCTGGAATTATCAGCGACTGCAAAGTCTTTACTTCTCATT
CAAGTTGCACATTTGTGGAGTTCCCTCCAATCAAGATCGGAGAGTTCGAA
CTGGGCAAGAGTGATTCTAAACGGATGGTGATCCAGGTAGTAATGACTGG
ATTGAACAAAGTACAAGCGCTGGTGCAAATATTCGCTTGCCGTTACTGTC
GCCACGATGACCTCGCAAATGACAATTCAATGTCGATCTGTCTCGCCTTG
GAGGCACGATTGCGAGGGGAATTGAATGATATCAGAAACTATGCGGTGTT
GGCAATGGCTGGTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0045122aflatoxin biosynthetic process
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_002880ATCC10864_002880Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002880-T1.exon1ATCC10864_002880-T1.exon1Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002880-T1.cdsATCC10864_002880-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002880-T1ATCC10864_002880-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF00172
InterProIPR001138
InterProIPR013700
InterProIPR036864
PFAMPF08493
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000054supercontigMCQH01000054:56410..57525 +
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