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ATCC10864_003014-T1, ATCC10864_003014-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_003014-T1
Unique NameATCC10864_003014-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000058:143316..143964+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_003014-T1 ID=ATCC10864_003014-T1|Name=ATCC10864_003014-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=649bp|location=Sequence derived from alignment at MCQH01000058:143316..143964+ (Aspergillus niger ATCC 10864)
ATGCCTGCCTCCGTCCACTCCGAAGAACAAGACCAGTCCATGCTGGACGC
CTCCGCGCCTCAAGAGCAAGAGCAGACCGATGTCCTAGAGCTGGACGAGA
AGCGCATTGTTGTTGTACGTATACACTACATACACTGTGGGACATGATTC
ACTTCCGGGCGTATGCTAATACCTGCTGGATGGGATAGTTGCCCGGCTCG
TCCGACACCGCAGCTTCGTTCCAATTCGAGGGAGAGGGTCACACTCTGGG
CAATGCGCTGCGGTATGCGATTATGAAGAAGTGCGTACACATACTCTACT
TTATTACAAACCCCTCTCTTCTCTGTTATGTTGGATCTTGCTAACGAGTT
TTCCTCGGGTTCAGCCCCGAAGTCGAATTCTGCGGTTACACCATCCCCCA
TCCTTCCGAGACGAAGATGAACCTTCGTATTCAGACTTATGGTTTGTTCT
TCCCGCCCTCCTACCTTCTTTTCCGTCAGAATAAAGATCACCTGTATTAA
CGAATGAACAAACAGAAACTACCACCGCCGTCGAAGCCCTCGAGAAAGGT
CTCGACACTCTAATGGACCTCTGTGATGTCGTGACGGACAAGTTCACGAC
TGCCCGTGATGACTTTAATGCTGCGCAGGCGGATCGCATGGAGGCTTAG
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Coding sequence (CDS) from alignment at MCQH01000058:143316..143964+

>ATCC10864_003014-T1 ID=ATCC10864_003014-T1|Name=ATCC10864_003014-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1668bp|location=Sequence derived from alignment at MCQH01000058:143316..143964+ (Aspergillus niger ATCC 10864)
ATGCCTGCCTCCGTCCACTCCGAAGAACAAGACCAGTCCATGCTGGACGC
CTCCGCGCCTCAAGAGCAAGAGCAGACCGATGTCCTAGAGCTGGACGAGA
AGCGCATTGTTGTTTTGCCCGGCTCGTCCGACACCGCAGCTTCGTTCCAA
TTCGAGGGAGAGGGTCACACTCTGGGCAATGCGCTGCGGTATGCGATTAT
GAAGAACCCCGAAGTCGAATTCTGCGGTTACACCATCCCCCATCCTTCCG
AGACGAAGATGAACCTTCGTATTCAGACTTATGAAACTACCACCGCCGTC
GAAGCCCTCGAGAAAGGTCTCGACACTCTAATGGACCTCTGTGATGTCGT
GACGGACAAGTTCACGACTGCCCGTGATGACTTTAATGCTGCGCAGGCGG
ATCGCATGGAGGCTTAGATGCCTGCCTCCGTCCACTCCGAAGAACAAGAC
CAGTCCATGCTGGACGCCTCCGCGCCTCAAGAGCAAGAGCAGACCGATGT
CCTAGAGCTGGACGAGAAGCGCATTGTTGTTTTGCCCGGCTCGTCCGACA
CCGCAGCTTCGTTCCAATTCGAGGGAGAGGGTCACACTCTGGGCAATGCG
CTGCGGTATGCGATTATGAAGAACCCCGAAGTCGAATTCTGCGGTTACAC
CATCCCCCATCCTTCCGAGACGAAGATGAACCTTCGTATTCAGACTTATG
AAACTACCACCGCCGTCGAAGCCCTCGAGAAAGGTCTCGACACTCTAATG
GACCTCTGTGATGTCGTGACGGACAAGTTCACGACTGCCCGTGATGACTT
TAATGCTGCGCAGGCGGATCGCATGGAGGCTTAGATGCCTGCCTCCGTCC
ACTCCGAAGAACAAGACCAGTCCATGCTGGACGCCTCCGCGCCTCAAGAG
CAAGAGCAGACCGATGTCCTAGAGCTGGACGAGAAGCGCATTGTTGTTTT
GCCCGGCTCGTCCGACACCGCAGCTTCGTTCCAATTCGAGGGAGAGGGTC
ACACTCTGGGCAATGCGCTGCGGTATGCGATTATGAAGAACCCCGAAGTC
GAATTCTGCGGTTACACCATCCCCCATCCTTCCGAGACGAAGATGAACCT
TCGTATTCAGACTTATGAAACTACCACCGCCGTCGAAGCCCTCGAGAAAG
GTCTCGACACTCTAATGGACCTCTGTGATGTCGTGACGGACAAGTTCACG
ACTGCCCGTGATGACTTTAATGCTGCGCAGGCGGATCGCATGGAGGCTTA
GATGCCTGCCTCCGTCCACTCCGAAGAACAAGACCAGTCCATGCTGGACG
CCTCCGCGCCTCAAGAGCAAGAGCAGACCGATGTCCTAGAGCTGGACGAG
AAGCGCATTGTTGTTTTGCCCGGCTCGTCCGACACCGCAGCTTCGTTCCA
ATTCGAGGGAGAGGGTCACACTCTGGGCAATGCGCTGCGGTATGCGATTA
TGAAGAACCCCGAAGTCGAATTCTGCGGTTACACCATCCCCCATCCTTCC
GAGACGAAGATGAACCTTCGTATTCAGACTTATGAAACTACCACCGCCGT
CGAAGCCCTCGAGAAAGGTCTCGACACTCTAATGGACCTCTGTGATGTCG
TGACGGACAAGTTCACGACTGCCCGTGATGACTTTAATGCTGCGCAGGCG
GATCGCATGGAGGCTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003899DNA-directed 5'-3' RNA polymerase activity
GO:0046983protein dimerization activity
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPC19ATCC10864_003014Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003014-T1.exon1ATCC10864_003014-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_003014-T1.exon2ATCC10864_003014-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_003014-T1.exon3ATCC10864_003014-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_003014-T1.exon4ATCC10864_003014-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003014-T1.cdsATCC10864_003014-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003014-T1ATCC10864_003014-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR009025
InterProIPR008193
PFAMPF13656
PFAMPF01193
InterProIPR033898
InterProIPR036603
Properties
Property NameValue
ProductRNA polymerase subunit AC19
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000058supercontigMCQH01000058:143316..143964 +
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