You are here

Home

ATCC10864_004047-T1, ATCC10864_004047-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_004047-T1
Unique NameATCC10864_004047-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000072:133411..135052-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_004047-T1 ID=ATCC10864_004047-T1|Name=ATCC10864_004047-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1642bp|location=Sequence derived from alignment at MCQH01000072:133411..135052- (Aspergillus niger ATCC 10864)
ATGGACACGGTCGCAGCCACCAGTGCAGAGGCGCACGACGCGCCCGAAGA
GTCGCCAGTGATCGCCTCCCGCGTGTTACGCAAGGTGGACAGTCGTCTGT
TGCCTCTCCTCTTCGTCACTTACCTGCTCAACTTTATGGATAAAACTATC
CTGTCGAGTGCATCTGTGTTTGGATTGATTGAAGATACCGTGAGGGCCTT
CCTTATCGATCAGCTAGCGTACTGTTACTAATTGATTTCCACCAGCATTT
GGTCGGCCAGCAGTACAGCTGGGTGTCCAGCATCTTCTACTTTGGATATT
TCTTCTGGGAATGGGTGCGACCGTGGTCCCTTCGCGACATTTACTCTGGT
GTACATGTGAGCTGACTTCCTTCCAGCCAACCAACGTGTTGATACCCCGG
GTGCCCGTCGCCAAATACCTCTCCATCAATACCTGGTTCTGGGGTGCCGT
AGTAGCCCTCACGGCCGCCTGTACCAACTACGGCGGTTTGCTGACCGTGC
GATTCCTTCTCGGGGTGGCGGAGGCCACCATCACGCCGGCCTTCATGTTC
CTCACCTCGACCTGGTACACCCGCGATGAGATTCCCTTCCGCACGGGCAT
CTGGTTCTCGGGCAACTCGGTCGGCGGGCTCGTCGCCAGTCTGCTCGCCT
ATGGCATTGGCCACATTGACCACCCCCTGCATCCCTGGATGTGGATGTTC
ATCATCCTCGGCGTAGCCACTTTTCTGTGGGGATTTGTCCTCTTCGCCTT
CCTCCCGGATAGCATCTCCACTGCCACGTTCCTCACCCCGGAGGAACGAG
AGTTCATGGCGCATCGTGCCGTGATCGCAGGTACCGGTCGGACAGAGAAA
ACCACCTGGAAATGGGCGCAATTTGTCGAATGCCTCTGCGACCCGAAGAC
GTGGCATCTCTTCGCCCTGGCAGTGCTGACCCAGATCCCCAACGGCGGCA
CACAAAACTTCGGCAACCTCGTCATCAAATCCTTCGGCTTCACCTCCCTG
CAATCCACCCTGATCGTCATCCCTGCCAGTGTGATCAGTGCTGGCACCAT
CGCGCTCACCGGCTGGCTGGCCGGTCGGTCCCACCACTGGAACTGCCTGC
TGATCGTGTGTATCGTCGCACTGTCCATCACCGGTAGTGCCATCATCTAC
GCCCGCGCCCACCATGTGCCCCTCGGCGCCCAGCTCTTCGGCTACTTTCT
GCTGTCCACGGGTCCCGGTGCCCTCCCGCTTATCATGTCCCTCCTACAGG
CGAATTACCGTGGTGTCACCAAGAAAATGACCATCACTTCCATGATGTTC
ATCGCTTACTGTGCGGGCAATATTGCTGGGCCGCAGTTTTTCAAATCAAG
TGAGGCGCCCCTGTATCAGACCTCGTTTCGAGCCATCCTTATCTGCTATA
TTATATCTGCGGTGTTGGCGGTGTCCCTGCGATGCTACTTGCAGTGGTTT
AATCGGAAGCGCGATCGCGAGGAGGGTGTCCAGGGGACGGCGACACTGGC
GGGTGCTGTGGGGGGGAAAGTTGTCAATGAGCGACAGGACGGTAATGATG
TGTCGGTGTTGGTGCAGTCGGTCGAGTTGCAGGCGGAAGATTATGAAGAT
GCGACCGATTGGAATACCGTCGGCTTCCGCTATCGGTTGTAG
back to top

Coding sequence (CDS) from alignment at MCQH01000072:133411..135052-

>ATCC10864_004047-T1 ID=ATCC10864_004047-T1|Name=ATCC10864_004047-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4572bp|location=Sequence derived from alignment at MCQH01000072:133411..135052- (Aspergillus niger ATCC 10864)
CCAACCAACGTGTTGATACCCCGGGTGCCCGTCGCCAAATACCTCTCCAT
CAATACCTGGTTCTGGGGTGCCGTAGTAGCCCTCACGGCCGCCTGTACCA
ACTACGGCGGTTTGCTGACCGTGCGATTCCTTCTCGGGGTGGCGGAGGCC
ACCATCACGCCGGCCTTCATGTTCCTCACCTCGACCTGGTACACCCGCGA
TGAGATTCCCTTCCGCACGGGCATCTGGTTCTCGGGCAACTCGGTCGGCG
GGCTCGTCGCCAGTCTGCTCGCCTATGGCATTGGCCACATTGACCACCCC
CTGCATCCCTGGATGTGGATGTTCATCATCCTCGGCGTAGCCACTTTTCT
GTGGGGATTTGTCCTCTTCGCCTTCCTCCCGGATAGCATCTCCACTGCCA
CGTTCCTCACCCCGGAGGAACGAGAGTTCATGGCGCATCGTGCCGTGATC
GCAGGTACCGGTCGGACAGAGAAAACCACCTGGAAATGGGCGCAATTTGT
CGAATGCCTCTGCGACCCGAAGACGTGGCATCTCTTCGCCCTGGCAGTGC
TGACCCAGATCCCCAACGGCGGCACACAAAACTTCGGCAACCTCGTCATC
AAATCCTTCGGCTTCACCTCCCTGCAATCCACCCTGATCGTCATCCCTGC
CAGTGTGATCAGTGCTGGCACCATCGCGCTCACCGGCTGGCTGGCCGGTC
GGTCCCACCACTGGAACTGCCTGCTGATCGTGTGTATCGTCGCACTGTCC
ATCACCGGTAGTGCCATCATCTACGCCCGCGCCCACCATGTGCCCCTCGG
CGCCCAGCTCTTCGGCTACTTTCTGCTGTCCACGGGTCCCGGTGCCCTCC
CGCTTATCATGTCCCTCCTACAGGCGAATTACCGTGGTGTCACCAAGAAA
ATGACCATCACTTCCATGATGTTCATCGCTTACTGTGCGGGCAATATTGC
TGGGCCGCAGTTTTTCAAATCAAGTGAGGCGCCCCTGTATCAGACCTCGT
TTCGAGCCATCCTTATCTGCTATATTATATCTGCGGTGTTGGCGGTGTCC
CTGCGATGCTACTTGCAGTGGTTTAATCGGAAGCGCGATCGCGAGGAGGG
TGTCCAGGGGACGGCGACACTGGCGGGTGCTGTGGGGGGGAAAGTTGTCA
ATGAGCGACAGGACGGTAATGATGTGTCGGTGTTGGTGCAGTCGGTCGAG
TTGCAGGCGGAAGATTATGAAGATGCGACCGATTGGAATACCGTCGGCTT
CCGCTATCGGTTGTAGCATTTGGTCGGCCAGCAGTACAGCTGGGTGTCCA
GCATCTTCTACTTTGGATATTTCTTCTGGGAATGGATGGACACGGTCGCA
GCCACCAGTGCAGAGGCGCACGACGCGCCCGAAGAGTCGCCAGTGATCGC
CTCCCGCGTGTTACGCAAGGTGGACAGTCGTCTGTTGCCTCTCCTCTTCG
TCACTTACCTGCTCAACTTTATGGATAAAACTATCCTGTCGAGTGCATCT
GTGTTTGGATTGATTGAAGATACCCCAACCAACGTGTTGATACCCCGGGT
GCCCGTCGCCAAATACCTCTCCATCAATACCTGGTTCTGGGGTGCCGTAG
TAGCCCTCACGGCCGCCTGTACCAACTACGGCGGTTTGCTGACCGTGCGA
TTCCTTCTCGGGGTGGCGGAGGCCACCATCACGCCGGCCTTCATGTTCCT
CACCTCGACCTGGTACACCCGCGATGAGATTCCCTTCCGCACGGGCATCT
GGTTCTCGGGCAACTCGGTCGGCGGGCTCGTCGCCAGTCTGCTCGCCTAT
GGCATTGGCCACATTGACCACCCCCTGCATCCCTGGATGTGGATGTTCAT
CATCCTCGGCGTAGCCACTTTTCTGTGGGGATTTGTCCTCTTCGCCTTCC
TCCCGGATAGCATCTCCACTGCCACGTTCCTCACCCCGGAGGAACGAGAG
TTCATGGCGCATCGTGCCGTGATCGCAGGTACCGGTCGGACAGAGAAAAC
CACCTGGAAATGGGCGCAATTTGTCGAATGCCTCTGCGACCCGAAGACGT
GGCATCTCTTCGCCCTGGCAGTGCTGACCCAGATCCCCAACGGCGGCACA
CAAAACTTCGGCAACCTCGTCATCAAATCCTTCGGCTTCACCTCCCTGCA
ATCCACCCTGATCGTCATCCCTGCCAGTGTGATCAGTGCTGGCACCATCG
CGCTCACCGGCTGGCTGGCCGGTCGGTCCCACCACTGGAACTGCCTGCTG
ATCGTGTGTATCGTCGCACTGTCCATCACCGGTAGTGCCATCATCTACGC
CCGCGCCCACCATGTGCCCCTCGGCGCCCAGCTCTTCGGCTACTTTCTGC
TGTCCACGGGTCCCGGTGCCCTCCCGCTTATCATGTCCCTCCTACAGGCG
AATTACCGTGGTGTCACCAAGAAAATGACCATCACTTCCATGATGTTCAT
CGCTTACTGTGCGGGCAATATTGCTGGGCCGCAGTTTTTCAAATCAAGTG
AGGCGCCCCTGTATCAGACCTCGTTTCGAGCCATCCTTATCTGCTATATT
ATATCTGCGGTGTTGGCGGTGTCCCTGCGATGCTACTTGCAGTGGTTTAA
TCGGAAGCGCGATCGCGAGGAGGGTGTCCAGGGGACGGCGACACTGGCGG
GTGCTGTGGGGGGGAAAGTTGTCAATGAGCGACAGGACGGTAATGATGTG
TCGGTGTTGGTGCAGTCGGTCGAGTTGCAGGCGGAAGATTATGAAGATGC
GACCGATTGGAATACCGTCGGCTTCCGCTATCGGTTGTAGCATTTGGTCG
GCCAGCAGTACAGCTGGGTGTCCAGCATCTTCTACTTTGGATATTTCTTC
TGGGAATGGATGGACACGGTCGCAGCCACCAGTGCAGAGGCGCACGACGC
GCCCGAAGAGTCGCCAGTGATCGCCTCCCGCGTGTTACGCAAGGTGGACA
GTCGTCTGTTGCCTCTCCTCTTCGTCACTTACCTGCTCAACTTTATGGAT
AAAACTATCCTGTCGAGTGCATCTGTGTTTGGATTGATTGAAGATACCCC
AACCAACGTGTTGATACCCCGGGTGCCCGTCGCCAAATACCTCTCCATCA
ATACCTGGTTCTGGGGTGCCGTAGTAGCCCTCACGGCCGCCTGTACCAAC
TACGGCGGTTTGCTGACCGTGCGATTCCTTCTCGGGGTGGCGGAGGCCAC
CATCACGCCGGCCTTCATGTTCCTCACCTCGACCTGGTACACCCGCGATG
AGATTCCCTTCCGCACGGGCATCTGGTTCTCGGGCAACTCGGTCGGCGGG
CTCGTCGCCAGTCTGCTCGCCTATGGCATTGGCCACATTGACCACCCCCT
GCATCCCTGGATGTGGATGTTCATCATCCTCGGCGTAGCCACTTTTCTGT
GGGGATTTGTCCTCTTCGCCTTCCTCCCGGATAGCATCTCCACTGCCACG
TTCCTCACCCCGGAGGAACGAGAGTTCATGGCGCATCGTGCCGTGATCGC
AGGTACCGGTCGGACAGAGAAAACCACCTGGAAATGGGCGCAATTTGTCG
AATGCCTCTGCGACCCGAAGACGTGGCATCTCTTCGCCCTGGCAGTGCTG
ACCCAGATCCCCAACGGCGGCACACAAAACTTCGGCAACCTCGTCATCAA
ATCCTTCGGCTTCACCTCCCTGCAATCCACCCTGATCGTCATCCCTGCCA
GTGTGATCAGTGCTGGCACCATCGCGCTCACCGGCTGGCTGGCCGGTCGG
TCCCACCACTGGAACTGCCTGCTGATCGTGTGTATCGTCGCACTGTCCAT
CACCGGTAGTGCCATCATCTACGCCCGCGCCCACCATGTGCCCCTCGGCG
CCCAGCTCTTCGGCTACTTTCTGCTGTCCACGGGTCCCGGTGCCCTCCCG
CTTATCATGTCCCTCCTACAGGCGAATTACCGTGGTGTCACCAAGAAAAT
GACCATCACTTCCATGATGTTCATCGCTTACTGTGCGGGCAATATTGCTG
GGCCGCAGTTTTTCAAATCAAGTGAGGCGCCCCTGTATCAGACCTCGTTT
CGAGCCATCCTTATCTGCTATATTATATCTGCGGTGTTGGCGGTGTCCCT
GCGATGCTACTTGCAGTGGTTTAATCGGAAGCGCGATCGCGAGGAGGGTG
TCCAGGGGACGGCGACACTGGCGGGTGCTGTGGGGGGGAAAGTTGTCAAT
GAGCGACAGGACGGTAATGATGTGTCGGTGTTGGTGCAGTCGGTCGAGTT
GCAGGCGGAAGATTATGAAGATGCGACCGATTGGAATACCGTCGGCTTCC
GCTATCGGTTGTAGCATTTGGTCGGCCAGCAGTACAGCTGGGTGTCCAGC
ATCTTCTACTTTGGATATTTCTTCTGGGAATGGATGGACACGGTCGCAGC
CACCAGTGCAGAGGCGCACGACGCGCCCGAAGAGTCGCCAGTGATCGCCT
CCCGCGTGTTACGCAAGGTGGACAGTCGTCTGTTGCCTCTCCTCTTCGTC
ACTTACCTGCTCAACTTTATGGATAAAACTATCCTGTCGAGTGCATCTGT
GTTTGGATTGATTGAAGATACC
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_004047ATCC10864_004047Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004047-T1ATCC10864_004047-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004047-T1.cdsATCC10864_004047-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004047-T1.exon3ATCC10864_004047-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_004047-T1.exon2ATCC10864_004047-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_004047-T1.exon1ATCC10864_004047-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR036259
InterProIPR011701
PFAMPF07690
InterProIPR020846
Properties
Property NameValue
NoteSMCOG1106:major facilitator transporter
NoteantiSMASH:Cluster_1000072.2
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000072supercontigMCQH01000072:133411..135052 -
Powered by Drupal