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ATCC10864_004861-T1, ATCC10864_004861-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_004861-T1
Unique NameATCC10864_004861-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000130:25601..26322+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_004861-T1 ID=ATCC10864_004861-T1|Name=ATCC10864_004861-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=722bp|location=Sequence derived from alignment at MCQH01000130:25601..26322+ (Aspergillus niger ATCC 10864)
ATGGGTTCCGTCGTTCTGCCACATCTGCGTACAGCCTGGCACGTCGACCA
GGCTATCCTTTCCGAGGAGGACAGACTTGTGGTGTGTATACATATCACCA
AGTCATGGCTGCGAAGCATATCATATCATACTAACCAAACGTATAAAGGT
CATCCGATTCGGTCGCGATCACGATGTCGACTGTACGACGTCACAAATCT
CCCTGATCACACTATGGGTGTAAGCTAACGCAGTGAATCGCAGGCATGCG
TCAGGACGAAGTCCTTTTCAAGATCGCTGAACGTGTGAAGAGTACGTCAA
GAAATCCTTTATCCATTCCTCCTTCCCAAAACGACTTTCTCCGGCAAGAA
GAAATTCGCAGTGACTAACCCCCAACCAGACTTCGCCGTAATCTACCTCT
GCGACATCGACGAGGTACCCGAGTTCAACACGATGTACGAACTCTTCGAC
CCAATGACCATCATGTTTTTCTACCGGAATAAGCACATGATGTGCGATTT
CGGCACAGGTAACAACAACAAGTTGAACTGGGTGCTTGAAGACAAGCAGG
AGATGATCGATATCATCGAGACCATCTACAAGGGCGCGAAGAAGGGACGT
GGTCTGGTCGTCAGCCCGAAGGGTAAGTCTATATACTGTCTTGATTGTCT
TCTTACTGGCTGGATGGTTTTGGCTGATGCATGATATCTGCTGTAGATTA
CTCGACGAGGTACCGTTACTGA
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Coding sequence (CDS) from alignment at MCQH01000130:25601..26322+

>ATCC10864_004861-T1 ID=ATCC10864_004861-T1|Name=ATCC10864_004861-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2160bp|location=Sequence derived from alignment at MCQH01000130:25601..26322+ (Aspergillus niger ATCC 10864)
ATGGGTTCCGTCGTTCTGCCACATCTGCGTACAGCCTGGCACGTCGACCA
GGCTATCCTTTCCGAGGAGGACAGACTTGTGGTCATCCGATTCGGTCGCG
ATCACGATGTCGACTGCATGCGTCAGGACGAAGTCCTTTTCAAGATCGCT
GAACGTGTGAAGAACTTCGCCGTAATCTACCTCTGCGACATCGACGAGGT
ACCCGAGTTCAACACGATGTACGAACTCTTCGACCCAATGACCATCATGT
TTTTCTACCGGAATAAGCACATGATGTGCGATTTCGGCACAGGTAACAAC
AACAAGTTGAACTGGGTGCTTGAAGACAAGCAGGAGATGATCGATATCAT
CGAGACCATCTACAAGGGCGCGAAGAAGGGACGTGGTCTGGTCGTCAGCC
CGAAGGATTACTCGACGAGGTACCGTTACTGAATGGGTTCCGTCGTTCTG
CCACATCTGCGTACAGCCTGGCACGTCGACCAGGCTATCCTTTCCGAGGA
GGACAGACTTGTGGTCATCCGATTCGGTCGCGATCACGATGTCGACTGCA
TGCGTCAGGACGAAGTCCTTTTCAAGATCGCTGAACGTGTGAAGAACTTC
GCCGTAATCTACCTCTGCGACATCGACGAGGTACCCGAGTTCAACACGAT
GTACGAACTCTTCGACCCAATGACCATCATGTTTTTCTACCGGAATAAGC
ACATGATGTGCGATTTCGGCACAGGTAACAACAACAAGTTGAACTGGGTG
CTTGAAGACAAGCAGGAGATGATCGATATCATCGAGACCATCTACAAGGG
CGCGAAGAAGGGACGTGGTCTGGTCGTCAGCCCGAAGGATTACTCGACGA
GGTACCGTTACTGAATGGGTTCCGTCGTTCTGCCACATCTGCGTACAGCC
TGGCACGTCGACCAGGCTATCCTTTCCGAGGAGGACAGACTTGTGGTCAT
CCGATTCGGTCGCGATCACGATGTCGACTGCATGCGTCAGGACGAAGTCC
TTTTCAAGATCGCTGAACGTGTGAAGAACTTCGCCGTAATCTACCTCTGC
GACATCGACGAGGTACCCGAGTTCAACACGATGTACGAACTCTTCGACCC
AATGACCATCATGTTTTTCTACCGGAATAAGCACATGATGTGCGATTTCG
GCACAGGTAACAACAACAAGTTGAACTGGGTGCTTGAAGACAAGCAGGAG
ATGATCGATATCATCGAGACCATCTACAAGGGCGCGAAGAAGGGACGTGG
TCTGGTCGTCAGCCCGAAGGATTACTCGACGAGGTACCGTTACTGAATGG
GTTCCGTCGTTCTGCCACATCTGCGTACAGCCTGGCACGTCGACCAGGCT
ATCCTTTCCGAGGAGGACAGACTTGTGGTCATCCGATTCGGTCGCGATCA
CGATGTCGACTGCATGCGTCAGGACGAAGTCCTTTTCAAGATCGCTGAAC
GTGTGAAGAACTTCGCCGTAATCTACCTCTGCGACATCGACGAGGTACCC
GAGTTCAACACGATGTACGAACTCTTCGACCCAATGACCATCATGTTTTT
CTACCGGAATAAGCACATGATGTGCGATTTCGGCACAGGTAACAACAACA
AGTTGAACTGGGTGCTTGAAGACAAGCAGGAGATGATCGATATCATCGAG
ACCATCTACAAGGGCGCGAAGAAGGGACGTGGTCTGGTCGTCAGCCCGAA
GGATTACTCGACGAGGTACCGTTACTGAATGGGTTCCGTCGTTCTGCCAC
ATCTGCGTACAGCCTGGCACGTCGACCAGGCTATCCTTTCCGAGGAGGAC
AGACTTGTGGTCATCCGATTCGGTCGCGATCACGATGTCGACTGCATGCG
TCAGGACGAAGTCCTTTTCAAGATCGCTGAACGTGTGAAGAACTTCGCCG
TAATCTACCTCTGCGACATCGACGAGGTACCCGAGTTCAACACGATGTAC
GAACTCTTCGACCCAATGACCATCATGTTTTTCTACCGGAATAAGCACAT
GATGTGCGATTTCGGCACAGGTAACAACAACAAGTTGAACTGGGTGCTTG
AAGACAAGCAGGAGATGATCGATATCATCGAGACCATCTACAAGGGCGCG
AAGAAGGGACGTGGTCTGGTCGTCAGCCCGAAGGATTACTCGACGAGGTA
CCGTTACTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0046540U4/U6 x U5 tri-snRNP complex
Vocabulary: Biological Process
TermDefinition
GO:0000398mRNA splicing, via spliceosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
DIM1ATCC10864_004861Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004861-T1ATCC10864_004861-T1-proteinAspergillus niger ATCC 10864polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004861-T1.exon1ATCC10864_004861-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_004861-T1.exon2ATCC10864_004861-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_004861-T1.exon3ATCC10864_004861-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_004861-T1.exon4ATCC10864_004861-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_004861-T1.exon5ATCC10864_004861-T1.exon5Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004861-T1.cdsATCC10864_004861-T1.cdsAspergillus niger ATCC 10864CDS


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF02966
InterProIPR004123
InterProIPR036249
Properties
Property NameValue
NoteBUSCO:EOG0926506U
ProductDimethyladenosine transferase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000130supercontigMCQH01000130:25601..26322 +
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