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ATCC10864_006757-T1, ATCC10864_006757-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_006757-T1
Unique NameATCC10864_006757-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000169:596973..598029+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_006757-T1 ID=ATCC10864_006757-T1|Name=ATCC10864_006757-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1057bp|location=Sequence derived from alignment at MCQH01000169:596973..598029+ (Aspergillus niger ATCC 10864)
ATGGCGCGCTTCAGAGCCAGCAATATTCTGGGCGACCCCTTTGCGCTCGC
AAGCACGTCCATCTCCATTGTATGTCTTCAATTCGTCCTCGTGCGGTGGT
TAGGATCCGCTACTAATCACCTTTTCTTCGTTTAGTTGGCTTGGTTGATC
GCATTTATCTCCTCCATTGTCACTGGCGTACATGGCGGATATCCCACCTA
TTCATGGTGGGCTGTTGCTTACTCATTTTGCTGCATTGTCGGCATGGCGC
TTGTCTTCGGCACCGATACTGGTGCCGTCTATAACATAGCGGTATGTTAC
CATCCCTCCTGAATCAATCTTTTGACAACCCTTCGTACTGATTTATGGCA
GATCGTGGGGTATCTTTCCGCTGGTCTTGTTATCACAACAATCTCCATCA
ACACGTTAGTCTATGCAAACAGCGCCGCATCGCAGGCTGCCGGTGCTGGG
TTCATTCTTTTGGCTATGGTTATTGTAAGTGATAACCAGCTCCGACACAC
ATACCCACTAGGCAGTACGTGACTTACCATTAATGCAGATCATTTGGATT
TTCTACTTCGGATCTAGCCCTCAGGCTTCGCATCGCGGCTTCATCGATTC
ATTTGCCCTCCAGAAGGAAGGTGCTGGCTCGTACGGAAATGGCAGACCTA
TGTCAACTGCATTCGGCAATCGACCCGAGACGACATCCAGCCAGCCCCCG
CAGATGTACACGTCCGCTCAACTCAACGGCTTCGAGACCTCTTCGCCCGT
GTCGGGTTATCCCGGAGGAGCCCCCGGCTCCGAACACCGCAGCTCCTCGC
AGCCCCGCTTCGGCAACCCGTCCGCTACGAATCTGCCCAACAATGGCGCA
CCAGATGAAGTCCCCCAGCCCACGGAATATCCGTACCGTGCGAAGGCGAT
CTATTCGTATGAGGCCAACCCTGAAGATGCCAATGAGATCAGTTTCACCA
AGCATGAGATCTTGGAGGTGTCCGATGTGAGCGGTAGATGGTGGCAGGCC
AGGAAGGCCACCGGAGAGACCGGTATTGCTCCATCCAACTACCTGATCTT
GCTGTGA
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Coding sequence (CDS) from alignment at MCQH01000169:596973..598029+

>ATCC10864_006757-T1 ID=ATCC10864_006757-T1|Name=ATCC10864_006757-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3468bp|location=Sequence derived from alignment at MCQH01000169:596973..598029+ (Aspergillus niger ATCC 10864)
ATGGCGCGCTTCAGAGCCAGCAATATTCTGGGCGACCCCTTTGCGCTCGC
AAGCACGTCCATCTCCATTTTGGCTTGGTTGATCGCATTTATCTCCTCCA
TTGTCACTGGCGTACATGGCGGATATCCCACCTATTCATGGTGGGCTGTT
GCTTACTCATTTTGCTGCATTGTCGGCATGGCGCTTGTCTTCGGCACCGA
TACTGGTGCCGTCTATAACATAGCGATCGTGGGGTATCTTTCCGCTGGTC
TTGTTATCACAACAATCTCCATCAACACGTTAGTCTATGCAAACAGCGCC
GCATCGCAGGCTGCCGGTGCTGGGTTCATTCTTTTGGCTATGGTTATTAT
CATTTGGATTTTCTACTTCGGATCTAGCCCTCAGGCTTCGCATCGCGGCT
TCATCGATTCATTTGCCCTCCAGAAGGAAGGTGCTGGCTCGTACGGAAAT
GGCAGACCTATGTCAACTGCATTCGGCAATCGACCCGAGACGACATCCAG
CCAGCCCCCGCAGATGTACACGTCCGCTCAACTCAACGGCTTCGAGACCT
CTTCGCCCGTGTCGGGTTATCCCGGAGGAGCCCCCGGCTCCGAACACCGC
AGCTCCTCGCAGCCCCGCTTCGGCAACCCGTCCGCTACGAATCTGCCCAA
CAATGGCGCACCAGATGAAGTCCCCCAGCCCACGGAATATCCGTACCGTG
CGAAGGCGATCTATTCGTATGAGGCCAACCCTGAAGATGCCAATGAGATC
AGTTTCACCAAGCATGAGATCTTGGAGGTGTCCGATGTGAGCGGTAGATG
GTGGCAGGCCAGGAAGGCCACCGGAGAGACCGGTATTGCTCCATCCAACT
ACCTGATCTTGCTGTGAATGGCGCGCTTCAGAGCCAGCAATATTCTGGGC
GACCCCTTTGCGCTCGCAAGCACGTCCATCTCCATTTTGGCTTGGTTGAT
CGCATTTATCTCCTCCATTGTCACTGGCGTACATGGCGGATATCCCACCT
ATTCATGGTGGGCTGTTGCTTACTCATTTTGCTGCATTGTCGGCATGGCG
CTTGTCTTCGGCACCGATACTGGTGCCGTCTATAACATAGCGATCGTGGG
GTATCTTTCCGCTGGTCTTGTTATCACAACAATCTCCATCAACACGTTAG
TCTATGCAAACAGCGCCGCATCGCAGGCTGCCGGTGCTGGGTTCATTCTT
TTGGCTATGGTTATTATCATTTGGATTTTCTACTTCGGATCTAGCCCTCA
GGCTTCGCATCGCGGCTTCATCGATTCATTTGCCCTCCAGAAGGAAGGTG
CTGGCTCGTACGGAAATGGCAGACCTATGTCAACTGCATTCGGCAATCGA
CCCGAGACGACATCCAGCCAGCCCCCGCAGATGTACACGTCCGCTCAACT
CAACGGCTTCGAGACCTCTTCGCCCGTGTCGGGTTATCCCGGAGGAGCCC
CCGGCTCCGAACACCGCAGCTCCTCGCAGCCCCGCTTCGGCAACCCGTCC
GCTACGAATCTGCCCAACAATGGCGCACCAGATGAAGTCCCCCAGCCCAC
GGAATATCCGTACCGTGCGAAGGCGATCTATTCGTATGAGGCCAACCCTG
AAGATGCCAATGAGATCAGTTTCACCAAGCATGAGATCTTGGAGGTGTCC
GATGTGAGCGGTAGATGGTGGCAGGCCAGGAAGGCCACCGGAGAGACCGG
TATTGCTCCATCCAACTACCTGATCTTGCTGTGAATGGCGCGCTTCAGAG
CCAGCAATATTCTGGGCGACCCCTTTGCGCTCGCAAGCACGTCCATCTCC
ATTTTGGCTTGGTTGATCGCATTTATCTCCTCCATTGTCACTGGCGTACA
TGGCGGATATCCCACCTATTCATGGTGGGCTGTTGCTTACTCATTTTGCT
GCATTGTCGGCATGGCGCTTGTCTTCGGCACCGATACTGGTGCCGTCTAT
AACATAGCGATCGTGGGGTATCTTTCCGCTGGTCTTGTTATCACAACAAT
CTCCATCAACACGTTAGTCTATGCAAACAGCGCCGCATCGCAGGCTGCCG
GTGCTGGGTTCATTCTTTTGGCTATGGTTATTATCATTTGGATTTTCTAC
TTCGGATCTAGCCCTCAGGCTTCGCATCGCGGCTTCATCGATTCATTTGC
CCTCCAGAAGGAAGGTGCTGGCTCGTACGGAAATGGCAGACCTATGTCAA
CTGCATTCGGCAATCGACCCGAGACGACATCCAGCCAGCCCCCGCAGATG
TACACGTCCGCTCAACTCAACGGCTTCGAGACCTCTTCGCCCGTGTCGGG
TTATCCCGGAGGAGCCCCCGGCTCCGAACACCGCAGCTCCTCGCAGCCCC
GCTTCGGCAACCCGTCCGCTACGAATCTGCCCAACAATGGCGCACCAGAT
GAAGTCCCCCAGCCCACGGAATATCCGTACCGTGCGAAGGCGATCTATTC
GTATGAGGCCAACCCTGAAGATGCCAATGAGATCAGTTTCACCAAGCATG
AGATCTTGGAGGTGTCCGATGTGAGCGGTAGATGGTGGCAGGCCAGGAAG
GCCACCGGAGAGACCGGTATTGCTCCATCCAACTACCTGATCTTGCTGTG
AATGGCGCGCTTCAGAGCCAGCAATATTCTGGGCGACCCCTTTGCGCTCG
CAAGCACGTCCATCTCCATTTTGGCTTGGTTGATCGCATTTATCTCCTCC
ATTGTCACTGGCGTACATGGCGGATATCCCACCTATTCATGGTGGGCTGT
TGCTTACTCATTTTGCTGCATTGTCGGCATGGCGCTTGTCTTCGGCACCG
ATACTGGTGCCGTCTATAACATAGCGATCGTGGGGTATCTTTCCGCTGGT
CTTGTTATCACAACAATCTCCATCAACACGTTAGTCTATGCAAACAGCGC
CGCATCGCAGGCTGCCGGTGCTGGGTTCATTCTTTTGGCTATGGTTATTA
TCATTTGGATTTTCTACTTCGGATCTAGCCCTCAGGCTTCGCATCGCGGC
TTCATCGATTCATTTGCCCTCCAGAAGGAAGGTGCTGGCTCGTACGGAAA
TGGCAGACCTATGTCAACTGCATTCGGCAATCGACCCGAGACGACATCCA
GCCAGCCCCCGCAGATGTACACGTCCGCTCAACTCAACGGCTTCGAGACC
TCTTCGCCCGTGTCGGGTTATCCCGGAGGAGCCCCCGGCTCCGAACACCG
CAGCTCCTCGCAGCCCCGCTTCGGCAACCCGTCCGCTACGAATCTGCCCA
ACAATGGCGCACCAGATGAAGTCCCCCAGCCCACGGAATATCCGTACCGT
GCGAAGGCGATCTATTCGTATGAGGCCAACCCTGAAGATGCCAATGAGAT
CAGTTTCACCAAGCATGAGATCTTGGAGGTGTCCGATGTGAGCGGTAGAT
GGTGGCAGGCCAGGAAGGCCACCGGAGAGACCGGTATTGCTCCATCCAAC
TACCTGATCTTGCTGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0005034osmosensor activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SHO1ATCC10864_006757Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006757-T1.exon1ATCC10864_006757-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_006757-T1.exon2ATCC10864_006757-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_006757-T1.exon3ATCC10864_006757-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_006757-T1.exon4ATCC10864_006757-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006757-T1.cdsATCC10864_006757-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006757-T1ATCC10864_006757-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR039644
InterProIPR035522
PFAMPF07653
InterProIPR036028
PFAMPF00018
InterProIPR001452
Properties
Property NameValue
ProductTransmembrane osmosensor
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000169supercontigMCQH01000169:596973..598029 +
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