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ATCC10864_007161-T1, ATCC10864_007161-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_007161-T1
Unique NameATCC10864_007161-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000172:287850..288682+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_007161-T1 ID=ATCC10864_007161-T1|Name=ATCC10864_007161-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=833bp|location=Sequence derived from alignment at MCQH01000172:287850..288682+ (Aspergillus niger ATCC 10864)
ATGTTGAAGATATGGTCGATGGTACGTCGCGACTGACTCCATCTACCTAC
CAACCGATACATTTCCCTCCTCACTAACACCCTCGAAACAGAAACAACAA
CAGCAGCAAGCTGAAAATGCCGAAGGAGCTGCTGGTAAAAAGAAGAAGAA
GGTCACCGCCGCCCAGCTGCGCGTGCAACGAGGTCTGTCCCTCCCTCTCT
CCCTACCTACCTACCCTTTCTCAAACCACACCCCTCCCCAGGACGTTAAT
AACTAACCATGTATCAACATCGAGATAGACCTGCAAGAGCTCACCCTCGG
AAGTACAATGAAAATGTCCTTCCCGAACCCCGACGACATCTTGAACTTCA
CTCTTACTATCGAGCCGGATGAGGGCATGTACAAGGGCGGCGCATTCCAC
TTCAACTTCACGGTTAACCAGAATTTCCCGCATGATCCGCCGAAGGTCAA
GTGCACGCAGAAGATCTACCATCCGAATATTGATCTCGAGGGAAATGTGT
GCTTGAATATTTTGAGGGAGGATTGGAAGCCTGTCTTGAACCTGAATGCT
GTTATTGTGGGGATGCAGGTATGTCTTTTTCTTTTCTTCCCTTTCTATAT
TGTTTTTGGTTGCTTTGGGGAGAGGGCGAGGGTTTGGATGTTTTTGGAGG
GTGTTTTGCTGATCTTTCTACCTTGCTTAGTTCCTCTTCCTGGAACCGAA
TGCTTCCGATCCGCTGAACAAGGAGGCCGCCGACGATCTGAGACAGAATC
GGGAAGCGTTCAAGCGCAACGTTAGGACGTCTATGGGTGGTGGTAGCGTG
AGGGGGATACAGTATGAGCGGGTTATGCGGTGA
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Coding sequence (CDS) from alignment at MCQH01000172:287850..288682+

>ATCC10864_007161-T1 ID=ATCC10864_007161-T1|Name=ATCC10864_007161-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2220bp|location=Sequence derived from alignment at MCQH01000172:287850..288682+ (Aspergillus niger ATCC 10864)
ATGTTGAAGATATGGTCGATGAAACAACAACAGCAGCAAGCTGAAAATGC
CGAAGGAGCTGCTGGTAAAAAGAAGAAGAAGGTCACCGCCGCCCAGCTGC
GCGTGCAACGAGACCTGCAAGAGCTCACCCTCGGAAGTACAATGAAAATG
TCCTTCCCGAACCCCGACGACATCTTGAACTTCACTCTTACTATCGAGCC
GGATGAGGGCATGTACAAGGGCGGCGCATTCCACTTCAACTTCACGGTTA
ACCAGAATTTCCCGCATGATCCGCCGAAGGTCAAGTGCACGCAGAAGATC
TACCATCCGAATATTGATCTCGAGGGAAATGTGTGCTTGAATATTTTGAG
GGAGGATTGGAAGCCTGTCTTGAACCTGAATGCTGTTATTGTGGGGATGC
AGTTCCTCTTCCTGGAACCGAATGCTTCCGATCCGCTGAACAAGGAGGCC
GCCGACGATCTGAGACAGAATCGGGAAGCGTTCAAGCGCAACGTTAGGAC
GTCTATGGGTGGTGGTAGCGTGAGGGGGATACAGTATGAGCGGGTTATGC
GGTGAATGTTGAAGATATGGTCGATGAAACAACAACAGCAGCAAGCTGAA
AATGCCGAAGGAGCTGCTGGTAAAAAGAAGAAGAAGGTCACCGCCGCCCA
GCTGCGCGTGCAACGAGACCTGCAAGAGCTCACCCTCGGAAGTACAATGA
AAATGTCCTTCCCGAACCCCGACGACATCTTGAACTTCACTCTTACTATC
GAGCCGGATGAGGGCATGTACAAGGGCGGCGCATTCCACTTCAACTTCAC
GGTTAACCAGAATTTCCCGCATGATCCGCCGAAGGTCAAGTGCACGCAGA
AGATCTACCATCCGAATATTGATCTCGAGGGAAATGTGTGCTTGAATATT
TTGAGGGAGGATTGGAAGCCTGTCTTGAACCTGAATGCTGTTATTGTGGG
GATGCAGTTCCTCTTCCTGGAACCGAATGCTTCCGATCCGCTGAACAAGG
AGGCCGCCGACGATCTGAGACAGAATCGGGAAGCGTTCAAGCGCAACGTT
AGGACGTCTATGGGTGGTGGTAGCGTGAGGGGGATACAGTATGAGCGGGT
TATGCGGTGAATGTTGAAGATATGGTCGATGAAACAACAACAGCAGCAAG
CTGAAAATGCCGAAGGAGCTGCTGGTAAAAAGAAGAAGAAGGTCACCGCC
GCCCAGCTGCGCGTGCAACGAGACCTGCAAGAGCTCACCCTCGGAAGTAC
AATGAAAATGTCCTTCCCGAACCCCGACGACATCTTGAACTTCACTCTTA
CTATCGAGCCGGATGAGGGCATGTACAAGGGCGGCGCATTCCACTTCAAC
TTCACGGTTAACCAGAATTTCCCGCATGATCCGCCGAAGGTCAAGTGCAC
GCAGAAGATCTACCATCCGAATATTGATCTCGAGGGAAATGTGTGCTTGA
ATATTTTGAGGGAGGATTGGAAGCCTGTCTTGAACCTGAATGCTGTTATT
GTGGGGATGCAGTTCCTCTTCCTGGAACCGAATGCTTCCGATCCGCTGAA
CAAGGAGGCCGCCGACGATCTGAGACAGAATCGGGAAGCGTTCAAGCGCA
ACGTTAGGACGTCTATGGGTGGTGGTAGCGTGAGGGGGATACAGTATGAG
CGGGTTATGCGGTGAATGTTGAAGATATGGTCGATGAAACAACAACAGCA
GCAAGCTGAAAATGCCGAAGGAGCTGCTGGTAAAAAGAAGAAGAAGGTCA
CCGCCGCCCAGCTGCGCGTGCAACGAGACCTGCAAGAGCTCACCCTCGGA
AGTACAATGAAAATGTCCTTCCCGAACCCCGACGACATCTTGAACTTCAC
TCTTACTATCGAGCCGGATGAGGGCATGTACAAGGGCGGCGCATTCCACT
TCAACTTCACGGTTAACCAGAATTTCCCGCATGATCCGCCGAAGGTCAAG
TGCACGCAGAAGATCTACCATCCGAATATTGATCTCGAGGGAAATGTGTG
CTTGAATATTTTGAGGGAGGATTGGAAGCCTGTCTTGAACCTGAATGCTG
TTATTGTGGGGATGCAGTTCCTCTTCCTGGAACCGAATGCTTCCGATCCG
CTGAACAAGGAGGCCGCCGACGATCTGAGACAGAATCGGGAAGCGTTCAA
GCGCAACGTTAGGACGTCTATGGGTGGTGGTAGCGTGAGGGGGATACAGT
ATGAGCGGGTTATGCGGTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
UBC12ATCC10864_007161Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007161-T1.exon1ATCC10864_007161-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_007161-T1.exon2ATCC10864_007161-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_007161-T1.exon3ATCC10864_007161-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_007161-T1.exon4ATCC10864_007161-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007161-T1.cdsATCC10864_007161-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007161-T1ATCC10864_007161-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR000608
InterProIPR023313
PFAMPF00179
InterProIPR016135
Properties
Property NameValue
NoteBUSCO:EOG09265FCK
ProductNEDD8-conjugating protein ubc12
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000172supercontigMCQH01000172:287850..288682 +
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