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ATCC10864_007165-T1, ATCC10864_007165-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_007165-T1
Unique NameATCC10864_007165-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000172:292340..293803+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_007165-T1 ID=ATCC10864_007165-T1|Name=ATCC10864_007165-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1464bp|location=Sequence derived from alignment at MCQH01000172:292340..293803+ (Aspergillus niger ATCC 10864)
ATGGCTGCTAACTTCGGAGGAGGCCTTCTTGGGGAGGTCCATGAGGAGAG
ACTCGACGAGGTATGTATGGGTCGGTGTTTCAGTTCACTGCATGATTCCG
CATCATATCTTTAATTTTCTTTGTGCATACTGCTCTCAGAATTCGCTGGA
AGGCCTGCTAATTTGGAGAAGCTTCTGCATGACCTAAGAAACATATCACA
TGGGATTGTCAATAGTAACGCCTTGAGGCCCAGACTGGGTGTTCAGGTGC
TTGATGATCTTCTGGGTGTCTTTACAACACCCGTCCCTGCTGCACAAGAC
ATGCATCTGGAAGGGCATATGCCGCAGGACCATTCCGGGGATGCTCAGGG
AGCTTACATGGATGATCCTGAGGGCGAACACCCAGCTCACGGCGAACTTA
TCAACGATGAGCATGCAGGCATGCATGGTCTGCCGATGGTGGTACCAAAC
CACGCAGAGCCAGTCCTGGAGATCTCGAGCAGGCTTTCTGCAGCCGGAAA
GTCGCATCTCCTGTACTATCTCGCTGCAGTTGCTATTTTACCATCTTTGT
TCCATGGTATCCCGCTCGGTGGGCATGAATCGGCAGTGGTATTCATTGAC
ACGGACGGCCGTTTTGATGCTGAGCGGCTTAGAACAGTGCTGAGAGGGAT
CGTGCACGCCAATATTAACGCACTGGCCCAGGGATCGCCTGGATGGACGT
CTGAGGTTGGAAATGAGGAAATTGAAAGTATGCTTGTCGTCAGTTTGCAA
CATGTCCACGTCTTCCGCCCACAATCGTCATCTGCTCTCCTTGCTACACT
TCACCATCTGGATGCATACATACTTGATCTATCTCGCCATTTATCTTCCA
CTCGACCGGTGCATACTATCTATCTTGATAGTGCCACTGCTTTCTTATGG
CAGGATAAATTGCAGGACGAAATTGCCCGAGTGGAAGATATCGGGCACGT
CCATGCTGACCCGGAGCATGAGCGTACTCAGAAACAACGGTTCCAGATCT
CAGATCTCTATGCTGCCTTTATAGCAAAATTGAAACGACTACAGCGACTT
TTAGGTTGCATGGTGGTTTACACCACTACGGTTCAGGGAAGATTCCCCGG
TGCTCGTGGTGGTAACCCAGCGTATACACCATCAGGACCCTACGATCTGT
ATACCCCAGGTCCTTCCGTGCCAAAGGCGCCTTCTTTTGGGCCTGCTCTT
CCAGCCCCTTGGGGTAGATTTCCTACTCTGCGAGTTGTTGTTCAACGGGA
TGCAGTTCGCCCCTTTCCGCCTACCATGACTGCGCAGAATGCGCAGCGCG
GAGCGCCTCGTCGACAAGAAATTGTCAGTCGCGGAAGGTTTTCCGGATGG
GTGAATGAATGGAGACGCGAGGAATGGCCTCGTCGGGTGCTGGAGGGCTT
TAAACGAAGTAATGGCGGCAAATTCGCCTTTCGCATAGGAGGAGACGGGG
TCGACATTGGCTGA
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Coding sequence (CDS) from alignment at MCQH01000172:292340..293803+

>ATCC10864_007165-T1 ID=ATCC10864_007165-T1|Name=ATCC10864_007165-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2706bp|location=Sequence derived from alignment at MCQH01000172:292340..293803+ (Aspergillus niger ATCC 10864)
ATGGCTGCTAACTTCGGAGGAGGCCTTCTTGGGGAGGTCCATGAGGAGAG
ACTCGACGAGCTTCTGCATGACCTAAGAAACATATCACATGGGATTGTCA
ATAGTAACGCCTTGAGGCCCAGACTGGGTGTTCAGGTGCTTGATGATCTT
CTGGGTGTCTTTACAACACCCGTCCCTGCTGCACAAGACATGCATCTGGA
AGGGCATATGCCGCAGGACCATTCCGGGGATGCTCAGGGAGCTTACATGG
ATGATCCTGAGGGCGAACACCCAGCTCACGGCGAACTTATCAACGATGAG
CATGCAGGCATGCATGGTCTGCCGATGGTGGTACCAAACCACGCAGAGCC
AGTCCTGGAGATCTCGAGCAGGCTTTCTGCAGCCGGAAAGTCGCATCTCC
TGTACTATCTCGCTGCAGTTGCTATTTTACCATCTTTGTTCCATGGTATC
CCGCTCGGTGGGCATGAATCGGCAGTGGTATTCATTGACACGGACGGCCG
TTTTGATGCTGAGCGGCTTAGAACAGTGCTGAGAGGGATCGTGCACGCCA
ATATTAACGCACTGGCCCAGGGATCGCCTGGATGGACGTCTGAGGTTGGA
AATGAGGAAATTGAAAGTATGCTTGTCGTCAGTTTGCAACATGTCCACGT
CTTCCGCCCACAATCGTCATCTGCTCTCCTTGCTACACTTCACCATCTGG
ATGCATACATACTTGATCTATCTCGCCATTTATCTTCCACTCGACCGGTG
CATACTATCTATCTTGATAGTGCCACTGCTTTCTTATGGCAGGATAAATT
GCAGGACGAAATTGCCCGAGTGGAAGATATCGGGCACGTCCATGCTGACC
CGGAGCATGAGCGTACTCAGAAACAACGGTTCCAGATCTCAGATCTCTAT
GCTGCCTTTATAGCAAAATTGAAACGACTACAGCGACTTTTAGGTTGCAT
GGTGGTTTACACCACTACGGTTCAGGGAAGATTCCCCGGTGCTCGTGGTG
GTAACCCAGCGTATACACCATCAGGACCCTACGATCTGTATACCCCAGGT
CCTTCCGTGCCAAAGGCGCCTTCTTTTGGGCCTGCTCTTCCAGCCCCTTG
GGGTAGATTTCCTACTCTGCGAGTTGTTGTTCAACGGGATGCAGTTCGCC
CCTTTCCGCCTACCATGACTGCGCAGAATGCGCAGCGCGGAGCGCCTCGT
CGACAAGAAATTGTCAGTCGCGGAAGGTTTTCCGGATGGGTGAATGAATG
GAGACGCGAGGAATGGCCTCGTCGGGTGCTGGAGGGCTTTAAACGAAGTA
ATGGCGGCAAATTCGCCTTTCGCATAGGAGGAGACGGGGTCGACATTGGC
TGAATGGCTGCTAACTTCGGAGGAGGCCTTCTTGGGGAGGTCCATGAGGA
GAGACTCGACGAGCTTCTGCATGACCTAAGAAACATATCACATGGGATTG
TCAATAGTAACGCCTTGAGGCCCAGACTGGGTGTTCAGGTGCTTGATGAT
CTTCTGGGTGTCTTTACAACACCCGTCCCTGCTGCACAAGACATGCATCT
GGAAGGGCATATGCCGCAGGACCATTCCGGGGATGCTCAGGGAGCTTACA
TGGATGATCCTGAGGGCGAACACCCAGCTCACGGCGAACTTATCAACGAT
GAGCATGCAGGCATGCATGGTCTGCCGATGGTGGTACCAAACCACGCAGA
GCCAGTCCTGGAGATCTCGAGCAGGCTTTCTGCAGCCGGAAAGTCGCATC
TCCTGTACTATCTCGCTGCAGTTGCTATTTTACCATCTTTGTTCCATGGT
ATCCCGCTCGGTGGGCATGAATCGGCAGTGGTATTCATTGACACGGACGG
CCGTTTTGATGCTGAGCGGCTTAGAACAGTGCTGAGAGGGATCGTGCACG
CCAATATTAACGCACTGGCCCAGGGATCGCCTGGATGGACGTCTGAGGTT
GGAAATGAGGAAATTGAAAGTATGCTTGTCGTCAGTTTGCAACATGTCCA
CGTCTTCCGCCCACAATCGTCATCTGCTCTCCTTGCTACACTTCACCATC
TGGATGCATACATACTTGATCTATCTCGCCATTTATCTTCCACTCGACCG
GTGCATACTATCTATCTTGATAGTGCCACTGCTTTCTTATGGCAGGATAA
ATTGCAGGACGAAATTGCCCGAGTGGAAGATATCGGGCACGTCCATGCTG
ACCCGGAGCATGAGCGTACTCAGAAACAACGGTTCCAGATCTCAGATCTC
TATGCTGCCTTTATAGCAAAATTGAAACGACTACAGCGACTTTTAGGTTG
CATGGTGGTTTACACCACTACGGTTCAGGGAAGATTCCCCGGTGCTCGTG
GTGGTAACCCAGCGTATACACCATCAGGACCCTACGATCTGTATACCCCA
GGTCCTTCCGTGCCAAAGGCGCCTTCTTTTGGGCCTGCTCTTCCAGCCCC
TTGGGGTAGATTTCCTACTCTGCGAGTTGTTGTTCAACGGGATGCAGTTC
GCCCCTTTCCGCCTACCATGACTGCGCAGAATGCGCAGCGCGGAGCGCCT
CGTCGACAAGAAATTGTCAGTCGCGGAAGGTTTTCCGGATGGGTGAATGA
ATGGAGACGCGAGGAATGGCCTCGTCGGGTGCTGGAGGGCTTTAAACGAA
GTAATGGCGGCAAATTCGCCTTTCGCATAGGAGGAGACGGGGTCGACATT
GGCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
GO:0000724double-strand break repair via homologous recombination
Vocabulary: Cellular Component
TermDefinition
GO:0005657replication fork
GO:0033063Rad51B-Rad51C-Rad51D-XRCC2 complex
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_007165ATCC10864_007165Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007165-T1.exon1ATCC10864_007165-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_007165-T1.exon2ATCC10864_007165-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007165-T1.cdsATCC10864_007165-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007165-T1ATCC10864_007165-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR030547
InterProIPR027417
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000172supercontigMCQH01000172:292340..293803 +
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