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ATCC10864_007226-T1, ATCC10864_007226-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_007226-T1
Unique NameATCC10864_007226-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000172:456862..458580+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_007226-T1 ID=ATCC10864_007226-T1|Name=ATCC10864_007226-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1719bp|location=Sequence derived from alignment at MCQH01000172:456862..458580+ (Aspergillus niger ATCC 10864)
ATGATGAAGCGCAGCGCGCTCCTTGCCTCTTTCCTTCCTCTCGCCCTGGG
GTGCGACAGCGCTGAGACTCACTCCTGTGCCTCTGCCTTTTCCGTCTCCT
CTGCGGCCGCCGCTAGCTTCTGCGCCACCTTCACGGCGAGCACCGTGACT
GCCACGACTGGCGTGCCGGATGTCTTCCTTTCCAACTGTGACTACAAGAC
CAAGCACCTCTCCAGTGCCTGCAGCTGCCTGGGCACCGCCGATGGATCTG
CTCCTGCTTCCACCCCGGCTGCCCCGGCAGTCTCCAGCAGCAGCAAGGTA
GTGAGTTTACCATTTAGATGCATCATCACGCTTTGATTACTGATTCAGTC
TAGGGCAAGGCACCTGCTGTTGCAGCCACTCGCACCTCGGCGATCCCGAC
CACTTTCCACACCACTGCCGTTCGTGTGCCCCTGTCCACCTCGGCAGCGG
CGGCTGTGACCTCCCAGGCTGTCCTCCCGGCGCAGAGCTCCGTGGCAGGC
AACGGAGGCACTACCTGCACAGTGACTGAGTACGCTTCGATCTCCTCTGC
CGTCGCATCCTGCTCCAACATCCTCCTGTCCAACATCAACGCCCCTGCAT
CGAGCACCATCGATCTCACGGGTCTGCAGACCGGTGCGGCTGTCATCTTT
GCTGGTGAAACCGTAAGTCATATCCTTCCTATATTAGGGCCAACCGCCAT
ACTAACGGAGAGTCCGACAGACCTTCGGTGACACCTACGACAGCGACTTC
GACCCCATTGTCATCTCCGGTACCGACGTGACCATCACCGGTGAGGAGGG
ACATGTCATCAACGGTAACGGTGAAGCCTACTGGGACGGCGAGGGATCCA
ACGGCGGACAGGACAAGTACGAGCCTACCACCACAGCCCTTTCATGAAGA
ACCCTACTCATAGCTCCTACCAGGCCCGACCACTTCATTGTCGTCAAGGA
CATGTACAACTCCAAGATCGAGAACCTCAACATCCTGAACTGGCCCGTCC
ACTGCTTCGAGATCGAGAACACCGAGTACCTGACCATCTCCGGCCTGATC
CTCAACAACACCGCCGGTGACGCCGCCAACAGCAAGAGTGACGGCGACCC
GGCCGCCCACAACACCGACGGCTTCGACATCAAGCAGAGCGACTTCCTGA
CCCTCTCCAACTCCTGGGTGCACAACCAGGACGACTGTGTTGCCGTTACC
AGCGGTAGCTCGATCGTCGTCGACAACCTCTACTGCTACGGTGGTCACGG
TCTCTCCATCGGCTCCATCGGCGGCAAGAGCAACAACACCGTCGACGGCG
TCACCTTCTCCAACTCCCAGGTCATTAACAGCGAGAACGGCTGCCGCATC
AAGTCTAATGCTGATACCACTGGCGAGGTTAGTCCATCCTATCTTAACCA
TCAACATCTTATTATTCTAACCACCGAGCAAATACAGGTCTACAACGTCA
AGTACGAAAACATCACTCTGTCCGGCATCAGCGACTACGGCATCGACATC
CAGCAGGACTACGAGAACGGTGGTGCTACCGGTGACCCGACCAACGGCGT
CAAGATCGAGAACATCTCTTTCGTCAATGTCAAGGGTACTATGAGCGACG
GCAAGGATTACTACATCCTCTGTGGTGATGGCAGCTGCTCTAACTTTGTC
TTCACTGATGTCGACATCACCGGTGGTAGCGATGATAGCTGCAACTACCC
CTCTTCGGGATGCCCTTAA
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Coding sequence (CDS) from alignment at MCQH01000172:456862..458580+

>ATCC10864_007226-T1 ID=ATCC10864_007226-T1|Name=ATCC10864_007226-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=7455bp|location=Sequence derived from alignment at MCQH01000172:456862..458580+ (Aspergillus niger ATCC 10864)
ATGATGAAGCGCAGCGCGCTCCTTGCCTCTTTCCTTCCTCTCGCCCTGGG
GTGCGACAGCGCTGAGACTCACTCCTGTGCCTCTGCCTTTTCCGTCTCCT
CTGCGGCCGCCGCTAGCTTCTGCGCCACCTTCACGGCGAGCACCGTGACT
GCCACGACTGGCGTGCCGGATGTCTTCCTTTCCAACTGTGACTACAAGAC
CAAGCACCTCTCCAGTGCCTGCAGCTGCCTGGGCACCGCCGATGGATCTG
CTCCTGCTTCCACCCCGGCTGCCCCGGCAGTCTCCAGCAGCAGCAAGGTA
GGCAAGGCACCTGCTGTTGCAGCCACTCGCACCTCGGCGATCCCGACCAC
TTTCCACACCACTGCCGTTCGTGTGCCCCTGTCCACCTCGGCAGCGGCGG
CTGTGACCTCCCAGGCTGTCCTCCCGGCGCAGAGCTCCGTGGCAGGCAAC
GGAGGCACTACCTGCACAGTGACTGAGTACGCTTCGATCTCCTCTGCCGT
CGCATCCTGCTCCAACATCCTCCTGTCCAACATCAACGCCCCTGCATCGA
GCACCATCGATCTCACGGGTCTGCAGACCGGTGCGGCTGTCATCTTTGCT
GGTGAAACCACCTTCGGTGACACCTACGACAGCGACTTCGACCCCATTGT
CATCTCCGGTACCGACGTGACCATCACCGGTGAGGAGGGACATGTCATCA
ACGGTAACGGTGAAGCCTACTGGGACGGCGAGGGATCCAACGGCGGACAG
GACAAGCCCGACCACTTCATTGTCGTCAAGGACATGTACAACTCCAAGAT
CGAGAACCTCAACATCCTGAACTGGCCCGTCCACTGCTTCGAGATCGAGA
ACACCGAGTACCTGACCATCTCCGGCCTGATCCTCAACAACACCGCCGGT
GACGCCGCCAACAGCAAGAGTGACGGCGACCCGGCCGCCCACAACACCGA
CGGCTTCGACATCAAGCAGAGCGACTTCCTGACCCTCTCCAACTCCTGGG
TGCACAACCAGGACGACTGTGTTGCCGTTACCAGCGGTAGCTCGATCGTC
GTCGACAACCTCTACTGCTACGGTGGTCACGGTCTCTCCATCGGCTCCAT
CGGCGGCAAGAGCAACAACACCGTCGACGGCGTCACCTTCTCCAACTCCC
AGGTCATTAACAGCGAGAACGGCTGCCGCATCAAGTCTAATGCTGATACC
ACTGGCGAGGTCTACAACGTCAAGTACGAAAACATCACTCTGTCCGGCAT
CAGCGACTACGGCATCGACATCCAGCAGGACTACGAGAACGGTGGTGCTA
CCGGTGACCCGACCAACGGCGTCAAGATCGAGAACATCTCTTTCGTCAAT
GTCAAGGGTACTATGAGCGACGGCAAGGATTACTACATCCTCTGTGGTGA
TGGCAGCTGCTCTAACTTTGTCTTCACTGATGTCGACATCACCGGTGGTA
GCGATGATAGCTGCAACTACCCCTCTTCGGGATGCCCTTAAATGATGAAG
CGCAGCGCGCTCCTTGCCTCTTTCCTTCCTCTCGCCCTGGGGTGCGACAG
CGCTGAGACTCACTCCTGTGCCTCTGCCTTTTCCGTCTCCTCTGCGGCCG
CCGCTAGCTTCTGCGCCACCTTCACGGCGAGCACCGTGACTGCCACGACT
GGCGTGCCGGATGTCTTCCTTTCCAACTGTGACTACAAGACCAAGCACCT
CTCCAGTGCCTGCAGCTGCCTGGGCACCGCCGATGGATCTGCTCCTGCTT
CCACCCCGGCTGCCCCGGCAGTCTCCAGCAGCAGCAAGGTAGGCAAGGCA
CCTGCTGTTGCAGCCACTCGCACCTCGGCGATCCCGACCACTTTCCACAC
CACTGCCGTTCGTGTGCCCCTGTCCACCTCGGCAGCGGCGGCTGTGACCT
CCCAGGCTGTCCTCCCGGCGCAGAGCTCCGTGGCAGGCAACGGAGGCACT
ACCTGCACAGTGACTGAGTACGCTTCGATCTCCTCTGCCGTCGCATCCTG
CTCCAACATCCTCCTGTCCAACATCAACGCCCCTGCATCGAGCACCATCG
ATCTCACGGGTCTGCAGACCGGTGCGGCTGTCATCTTTGCTGGTGAAACC
ACCTTCGGTGACACCTACGACAGCGACTTCGACCCCATTGTCATCTCCGG
TACCGACGTGACCATCACCGGTGAGGAGGGACATGTCATCAACGGTAACG
GTGAAGCCTACTGGGACGGCGAGGGATCCAACGGCGGACAGGACAAGCCC
GACCACTTCATTGTCGTCAAGGACATGTACAACTCCAAGATCGAGAACCT
CAACATCCTGAACTGGCCCGTCCACTGCTTCGAGATCGAGAACACCGAGT
ACCTGACCATCTCCGGCCTGATCCTCAACAACACCGCCGGTGACGCCGCC
AACAGCAAGAGTGACGGCGACCCGGCCGCCCACAACACCGACGGCTTCGA
CATCAAGCAGAGCGACTTCCTGACCCTCTCCAACTCCTGGGTGCACAACC
AGGACGACTGTGTTGCCGTTACCAGCGGTAGCTCGATCGTCGTCGACAAC
CTCTACTGCTACGGTGGTCACGGTCTCTCCATCGGCTCCATCGGCGGCAA
GAGCAACAACACCGTCGACGGCGTCACCTTCTCCAACTCCCAGGTCATTA
ACAGCGAGAACGGCTGCCGCATCAAGTCTAATGCTGATACCACTGGCGAG
GTCTACAACGTCAAGTACGAAAACATCACTCTGTCCGGCATCAGCGACTA
CGGCATCGACATCCAGCAGGACTACGAGAACGGTGGTGCTACCGGTGACC
CGACCAACGGCGTCAAGATCGAGAACATCTCTTTCGTCAATGTCAAGGGT
ACTATGAGCGACGGCAAGGATTACTACATCCTCTGTGGTGATGGCAGCTG
CTCTAACTTTGTCTTCACTGATGTCGACATCACCGGTGGTAGCGATGATA
GCTGCAACTACCCCTCTTCGGGATGCCCTTAAATGATGAAGCGCAGCGCG
CTCCTTGCCTCTTTCCTTCCTCTCGCCCTGGGGTGCGACAGCGCTGAGAC
TCACTCCTGTGCCTCTGCCTTTTCCGTCTCCTCTGCGGCCGCCGCTAGCT
TCTGCGCCACCTTCACGGCGAGCACCGTGACTGCCACGACTGGCGTGCCG
GATGTCTTCCTTTCCAACTGTGACTACAAGACCAAGCACCTCTCCAGTGC
CTGCAGCTGCCTGGGCACCGCCGATGGATCTGCTCCTGCTTCCACCCCGG
CTGCCCCGGCAGTCTCCAGCAGCAGCAAGGTAGGCAAGGCACCTGCTGTT
GCAGCCACTCGCACCTCGGCGATCCCGACCACTTTCCACACCACTGCCGT
TCGTGTGCCCCTGTCCACCTCGGCAGCGGCGGCTGTGACCTCCCAGGCTG
TCCTCCCGGCGCAGAGCTCCGTGGCAGGCAACGGAGGCACTACCTGCACA
GTGACTGAGTACGCTTCGATCTCCTCTGCCGTCGCATCCTGCTCCAACAT
CCTCCTGTCCAACATCAACGCCCCTGCATCGAGCACCATCGATCTCACGG
GTCTGCAGACCGGTGCGGCTGTCATCTTTGCTGGTGAAACCACCTTCGGT
GACACCTACGACAGCGACTTCGACCCCATTGTCATCTCCGGTACCGACGT
GACCATCACCGGTGAGGAGGGACATGTCATCAACGGTAACGGTGAAGCCT
ACTGGGACGGCGAGGGATCCAACGGCGGACAGGACAAGCCCGACCACTTC
ATTGTCGTCAAGGACATGTACAACTCCAAGATCGAGAACCTCAACATCCT
GAACTGGCCCGTCCACTGCTTCGAGATCGAGAACACCGAGTACCTGACCA
TCTCCGGCCTGATCCTCAACAACACCGCCGGTGACGCCGCCAACAGCAAG
AGTGACGGCGACCCGGCCGCCCACAACACCGACGGCTTCGACATCAAGCA
GAGCGACTTCCTGACCCTCTCCAACTCCTGGGTGCACAACCAGGACGACT
GTGTTGCCGTTACCAGCGGTAGCTCGATCGTCGTCGACAACCTCTACTGC
TACGGTGGTCACGGTCTCTCCATCGGCTCCATCGGCGGCAAGAGCAACAA
CACCGTCGACGGCGTCACCTTCTCCAACTCCCAGGTCATTAACAGCGAGA
ACGGCTGCCGCATCAAGTCTAATGCTGATACCACTGGCGAGGTCTACAAC
GTCAAGTACGAAAACATCACTCTGTCCGGCATCAGCGACTACGGCATCGA
CATCCAGCAGGACTACGAGAACGGTGGTGCTACCGGTGACCCGACCAACG
GCGTCAAGATCGAGAACATCTCTTTCGTCAATGTCAAGGGTACTATGAGC
GACGGCAAGGATTACTACATCCTCTGTGGTGATGGCAGCTGCTCTAACTT
TGTCTTCACTGATGTCGACATCACCGGTGGTAGCGATGATAGCTGCAACT
ACCCCTCTTCGGGATGCCCTTAAATGATGAAGCGCAGCGCGCTCCTTGCC
TCTTTCCTTCCTCTCGCCCTGGGGTGCGACAGCGCTGAGACTCACTCCTG
TGCCTCTGCCTTTTCCGTCTCCTCTGCGGCCGCCGCTAGCTTCTGCGCCA
CCTTCACGGCGAGCACCGTGACTGCCACGACTGGCGTGCCGGATGTCTTC
CTTTCCAACTGTGACTACAAGACCAAGCACCTCTCCAGTGCCTGCAGCTG
CCTGGGCACCGCCGATGGATCTGCTCCTGCTTCCACCCCGGCTGCCCCGG
CAGTCTCCAGCAGCAGCAAGGTAGGCAAGGCACCTGCTGTTGCAGCCACT
CGCACCTCGGCGATCCCGACCACTTTCCACACCACTGCCGTTCGTGTGCC
CCTGTCCACCTCGGCAGCGGCGGCTGTGACCTCCCAGGCTGTCCTCCCGG
CGCAGAGCTCCGTGGCAGGCAACGGAGGCACTACCTGCACAGTGACTGAG
TACGCTTCGATCTCCTCTGCCGTCGCATCCTGCTCCAACATCCTCCTGTC
CAACATCAACGCCCCTGCATCGAGCACCATCGATCTCACGGGTCTGCAGA
CCGGTGCGGCTGTCATCTTTGCTGGTGAAACCACCTTCGGTGACACCTAC
GACAGCGACTTCGACCCCATTGTCATCTCCGGTACCGACGTGACCATCAC
CGGTGAGGAGGGACATGTCATCAACGGTAACGGTGAAGCCTACTGGGACG
GCGAGGGATCCAACGGCGGACAGGACAAGCCCGACCACTTCATTGTCGTC
AAGGACATGTACAACTCCAAGATCGAGAACCTCAACATCCTGAACTGGCC
CGTCCACTGCTTCGAGATCGAGAACACCGAGTACCTGACCATCTCCGGCC
TGATCCTCAACAACACCGCCGGTGACGCCGCCAACAGCAAGAGTGACGGC
GACCCGGCCGCCCACAACACCGACGGCTTCGACATCAAGCAGAGCGACTT
CCTGACCCTCTCCAACTCCTGGGTGCACAACCAGGACGACTGTGTTGCCG
TTACCAGCGGTAGCTCGATCGTCGTCGACAACCTCTACTGCTACGGTGGT
CACGGTCTCTCCATCGGCTCCATCGGCGGCAAGAGCAACAACACCGTCGA
CGGCGTCACCTTCTCCAACTCCCAGGTCATTAACAGCGAGAACGGCTGCC
GCATCAAGTCTAATGCTGATACCACTGGCGAGGTCTACAACGTCAAGTAC
GAAAACATCACTCTGTCCGGCATCAGCGACTACGGCATCGACATCCAGCA
GGACTACGAGAACGGTGGTGCTACCGGTGACCCGACCAACGGCGTCAAGA
TCGAGAACATCTCTTTCGTCAATGTCAAGGGTACTATGAGCGACGGCAAG
GATTACTACATCCTCTGTGGTGATGGCAGCTGCTCTAACTTTGTCTTCAC
TGATGTCGACATCACCGGTGGTAGCGATGATAGCTGCAACTACCCCTCTT
CGGGATGCCCTTAAATGATGAAGCGCAGCGCGCTCCTTGCCTCTTTCCTT
CCTCTCGCCCTGGGGTGCGACAGCGCTGAGACTCACTCCTGTGCCTCTGC
CTTTTCCGTCTCCTCTGCGGCCGCCGCTAGCTTCTGCGCCACCTTCACGG
CGAGCACCGTGACTGCCACGACTGGCGTGCCGGATGTCTTCCTTTCCAAC
TGTGACTACAAGACCAAGCACCTCTCCAGTGCCTGCAGCTGCCTGGGCAC
CGCCGATGGATCTGCTCCTGCTTCCACCCCGGCTGCCCCGGCAGTCTCCA
GCAGCAGCAAGGTAGGCAAGGCACCTGCTGTTGCAGCCACTCGCACCTCG
GCGATCCCGACCACTTTCCACACCACTGCCGTTCGTGTGCCCCTGTCCAC
CTCGGCAGCGGCGGCTGTGACCTCCCAGGCTGTCCTCCCGGCGCAGAGCT
CCGTGGCAGGCAACGGAGGCACTACCTGCACAGTGACTGAGTACGCTTCG
ATCTCCTCTGCCGTCGCATCCTGCTCCAACATCCTCCTGTCCAACATCAA
CGCCCCTGCATCGAGCACCATCGATCTCACGGGTCTGCAGACCGGTGCGG
CTGTCATCTTTGCTGGTGAAACCACCTTCGGTGACACCTACGACAGCGAC
TTCGACCCCATTGTCATCTCCGGTACCGACGTGACCATCACCGGTGAGGA
GGGACATGTCATCAACGGTAACGGTGAAGCCTACTGGGACGGCGAGGGAT
CCAACGGCGGACAGGACAAGCCCGACCACTTCATTGTCGTCAAGGACATG
TACAACTCCAAGATCGAGAACCTCAACATCCTGAACTGGCCCGTCCACTG
CTTCGAGATCGAGAACACCGAGTACCTGACCATCTCCGGCCTGATCCTCA
ACAACACCGCCGGTGACGCCGCCAACAGCAAGAGTGACGGCGACCCGGCC
GCCCACAACACCGACGGCTTCGACATCAAGCAGAGCGACTTCCTGACCCT
CTCCAACTCCTGGGTGCACAACCAGGACGACTGTGTTGCCGTTACCAGCG
GTAGCTCGATCGTCGTCGACAACCTCTACTGCTACGGTGGTCACGGTCTC
TCCATCGGCTCCATCGGCGGCAAGAGCAACAACACCGTCGACGGCGTCAC
CTTCTCCAACTCCCAGGTCATTAACAGCGAGAACGGCTGCCGCATCAAGT
CTAATGCTGATACCACTGGCGAGGTCTACAACGTCAAGTACGAAAACATC
ACTCTGTCCGGCATCAGCGACTACGGCATCGACATCCAGCAGGACTACGA
GAACGGTGGTGCTACCGGTGACCCGACCAACGGCGTCAAGATCGAGAACA
TCTCTTTCGTCAATGTCAAGGGTACTATGAGCGACGGCAAGGATTACTAC
ATCCTCTGTGGTGATGGCAGCTGCTCTAACTTTGTCTTCACTGATGTCGA
CATCACCGGTGGTAGCGATGATAGCTGCAACTACCCCTCTTCGGGATGCC
CTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004650polygalacturonase activity
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_007226ATCC10864_007226Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007226-T1ATCC10864_007226-T1-proteinAspergillus niger ATCC 10864polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007226-T1.exon1ATCC10864_007226-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_007226-T1.exon2ATCC10864_007226-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_007226-T1.exon3ATCC10864_007226-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_007226-T1.exon4ATCC10864_007226-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_007226-T1.exon5ATCC10864_007226-T1.exon5Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007226-T1.cdsATCC10864_007226-T1.cdsAspergillus niger ATCC 10864CDS


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR000743
InterProIPR006626
InterProIPR012334
InterProIPR011050
PFAMPF00295
Properties
Property NameValue
NoteCAZy:GH28
NoteSECRETED:SignalP(1-17)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000172supercontigMCQH01000172:456862..458580 +
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