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ATCC10864_007388-T1, ATCC10864_007388-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_007388-T1
Unique NameATCC10864_007388-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000184:218043..219219-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_007388-T1 ID=ATCC10864_007388-T1|Name=ATCC10864_007388-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1177bp|location=Sequence derived from alignment at MCQH01000184:218043..219219- (Aspergillus niger ATCC 10864)
ATGATGGACAATCCACAGGACCGGATGGTGGATGATTTGCGATCGGCTCA
GGCCAAGGCATTCGGAGTCGTTGCCGCCAAATCCCACACAACTCCGGTGG
CCAAGGCGGACCAGACCGGCAGTTGCCGCAAGAAAAAAAGTTGCCCGCCT
TTTGCGTTCCAGACCCTATTTTGATCTACTCATCATTCTTCACATATATA
CACGATGTTGGTATGTCGCTGCTTGAGAGTCTAAAATTAGCCATTCCCCG
TGCTCCCAGACGGTATATCGCTAACTACTTCTGATCCAGCGTCGTCAAGC
CCGTGAGCGTCGCGATTATCTGTACCGGAGAGCTCTTACTCTCCGCGATG
CCTCCATCGCTGAAAAGCGAGCCCAGCTGAAGGCGTCGCTGGCCTCCGGA
AAACCCCTCGATCCCTCAATCGCTGAAGATAAATCGCTGCGCGAAGACTT
CAAATATGATGAATCCATTACCCCGGATAACCAGAACAAAGATGGCGACG
TCGATCTCGATGATGAATATGCCCTCACCTCCGGCATCGCCGACCCCCGT
CCTATCGTGACAACCTCTCGCTCCCCTTCTGTCCGTCTGGGCACATTCGC
TAAGGAGATCCGTCTGCTCCTTCCAACTTCCATTCGCTTGAACCGTGGTA
ACCTCGTTCTTCCGGACTTGGTCTCAAGCGCAAATGCCGCCGCGCTGACC
GACATGATTCTCGTGCACGAACACCGTGGTACACCCACTGCGATGACGAT
CTCTCACCTTCCTCATGGGCCGACTGCTAGTTTCTCCCTGCATAACGTTG
TTCTCCGTGCGGATATCCCCAATGCTGCTCGCGGAACTGTGTCAGAGAGC
TACCCTCACCTCATCTTCGAAGGGTTCAAGACCAAGCTGGGTCTTCGTGT
GGTTCAGATCTTGAAACACCTATTCCCTCCGCGTGAGGCCGGCAAGGTTG
GAAACCGTGTCGTCAGCTTTGTGAACAAGGAGGACAGCATTGAGGTCCGT
CACCATGTTTTCGTCAAGACCGGATACCGGGATGTTGAGCTGGCGGAAGT
TGGTCCTCGTATGACTATGCGACTGTTCGAAATTCGCGGTGGAACTCTGG
AGAAAGGCTCTAGTGGTGATGTTGAATGGGCTCTTACCCAGTACACTAGG
ACGAGCAAGAAGAAGGATTATCTGTGA
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Coding sequence (CDS) from alignment at MCQH01000184:218043..219219-

>ATCC10864_007388-T1 ID=ATCC10864_007388-T1|Name=ATCC10864_007388-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1968bp|location=Sequence derived from alignment at MCQH01000184:218043..219219- (Aspergillus niger ATCC 10864)
CGTCGTCAAGCCCGTGAGCGTCGCGATTATCTGTACCGGAGAGCTCTTAC
TCTCCGCGATGCCTCCATCGCTGAAAAGCGAGCCCAGCTGAAGGCGTCGC
TGGCCTCCGGAAAACCCCTCGATCCCTCAATCGCTGAAGATAAATCGCTG
CGCGAAGACTTCAAATATGATGAATCCATTACCCCGGATAACCAGAACAA
AGATGGCGACGTCGATCTCGATGATGAATATGCCCTCACCTCCGGCATCG
CCGACCCCCGTCCTATCGTGACAACCTCTCGCTCCCCTTCTGTCCGTCTG
GGCACATTCGCTAAGGAGATCCGTCTGCTCCTTCCAACTTCCATTCGCTT
GAACCGTGGTAACCTCGTTCTTCCGGACTTGGTCTCAAGCGCAAATGCCG
CCGCGCTGACCGACATGATTCTCGTGCACGAACACCGTGGTACACCCACT
GCGATGACGATCTCTCACCTTCCTCATGGGCCGACTGCTAGTTTCTCCCT
GCATAACGTTGTTCTCCGTGCGGATATCCCCAATGCTGCTCGCGGAACTG
TGTCAGAGAGCTACCCTCACCTCATCTTCGAAGGGTTCAAGACCAAGCTG
GGTCTTCGTGTGGTTCAGATCTTGAAACACCTATTCCCTCCGCGTGAGGC
CGGCAAGGTTGGAAACCGTGTCGTCAGCTTTGTGAACAAGGAGGACAGCA
TTGAGGTCCGTCACCATGTTTTCGTCAAGACCGGATACCGGGATGTTGAG
CTGGCGGAAGTTGGTCCTCGTATGACTATGCGACTGTTCGAAATTCGCGG
TGGAACTCTGGAGAAAGGCTCTAGTGGTGATGTTGAATGGGCTCTTACCC
AGTACACTAGGACGAGCAAGAAGAAGGATTATCTGTGAATGATGGACAAT
CCACAGGACCGGATGGTGGATGATTTGCGATCGGCTCAGGCCAAGGCATT
CGGAGTCGTTGCCGCCAAATCCCACACAACTCCGCGTCGTCAAGCCCGTG
AGCGTCGCGATTATCTGTACCGGAGAGCTCTTACTCTCCGCGATGCCTCC
ATCGCTGAAAAGCGAGCCCAGCTGAAGGCGTCGCTGGCCTCCGGAAAACC
CCTCGATCCCTCAATCGCTGAAGATAAATCGCTGCGCGAAGACTTCAAAT
ATGATGAATCCATTACCCCGGATAACCAGAACAAAGATGGCGACGTCGAT
CTCGATGATGAATATGCCCTCACCTCCGGCATCGCCGACCCCCGTCCTAT
CGTGACAACCTCTCGCTCCCCTTCTGTCCGTCTGGGCACATTCGCTAAGG
AGATCCGTCTGCTCCTTCCAACTTCCATTCGCTTGAACCGTGGTAACCTC
GTTCTTCCGGACTTGGTCTCAAGCGCAAATGCCGCCGCGCTGACCGACAT
GATTCTCGTGCACGAACACCGTGGTACACCCACTGCGATGACGATCTCTC
ACCTTCCTCATGGGCCGACTGCTAGTTTCTCCCTGCATAACGTTGTTCTC
CGTGCGGATATCCCCAATGCTGCTCGCGGAACTGTGTCAGAGAGCTACCC
TCACCTCATCTTCGAAGGGTTCAAGACCAAGCTGGGTCTTCGTGTGGTTC
AGATCTTGAAACACCTATTCCCTCCGCGTGAGGCCGGCAAGGTTGGAAAC
CGTGTCGTCAGCTTTGTGAACAAGGAGGACAGCATTGAGGTCCGTCACCA
TGTTTTCGTCAAGACCGGATACCGGGATGTTGAGCTGGCGGAAGTTGGTC
CTCGTATGACTATGCGACTGTTCGAAATTCGCGGTGGAACTCTGGAGAAA
GGCTCTAGTGGTGATGTTGAATGGGCTCTTACCCAGTACACTAGGACGAG
CAAGAAGAAGGATTATCTGTGAATGATGGACAATCCACAGGACCGGATGG
TGGATGATTTGCGATCGGCTCAGGCCAAGGCATTCGGAGTCGTTGCCGCC
AAATCCCACACAACTCCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0019843rRNA binding
GO:0042134rRNA primary transcript binding
Vocabulary: Biological Process
TermDefinition
GO:0006364rRNA processing
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_007388ATCC10864_007388Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007388-T1ATCC10864_007388-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007388-T1.cdsATCC10864_007388-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007388-T1.exon2ATCC10864_007388-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_007388-T1.exon1ATCC10864_007388-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR007109
InterProIPR044281
PFAMPF04427
Properties
Property NameValue
NoteBUSCO:EOG09263LR1
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000184supercontigMCQH01000184:218043..219219 -
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