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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000208:224978..227108- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_009117-T1 ID=ATCC10864_009117-T1|Name=ATCC10864_009117-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=2131bp|location=Sequence derived from alignment at MCQH01000208:224978..227108- (Aspergillus niger ATCC 10864)
ATGACTTCTCAAGTATGCGATCAATTCCCCCTCCCCTCTCTTCCCGCCCC
TCATCTGTACCACTGCTAATGATCCGAGTAACAGTACGCGGCGGAGCTAT
GTGCGCTCTTGGTCGAGGATAATTTCGGGGAGCTTTTTGCGGTATGCTCG
CTTTTGCTCACTTGGTAACCCGCTGCATTCATGAAGAACCATATAGTCGG
TGTCAATTTGCGGGCCACATCGAGCAACAGGCTGACCGTTATCCGTCTTC
GCCAGCGTATCTTCTCAACCCTCCAGCGCTATGACCGGCTCTCATTACCT
CGTTTAAAATTCTACTCGCGCCTCTCCGATCGTCAACTTCGTCATGGTCT
ATCTGCCATGATTCAACACCACCTGGTGTACCATTACACATCCTACGACG
ATGGCGTTACCTATTACGAACCAAACCTGCAGGCTGCGTACTATCTTGTT
CGCTCCGGCAAGATCCTGGAGTTCATCGAAGAACGGCTTGGGAAGTATGC
GGCTACCCTTATGGAGACCATTATGTTTCTCGGACACGCACAAGTCGGCT
ACCTCGAGACCCTCCCTGAACTGCAACCCGCACCACCTAAAGCGAATGGC
GTGAAACAGGAAGCCGAAGGTGGAGAGTCCGAAGAACAAATGAATGGCGA
TGATGTGCACACCTCCGACCAGCCGGCGCTTCTACATCCTACTCTGAAAG
CACTGGCTTCCCACGGTTATATCTTTCGTGTGCGCGATGCGCAATTCCAA
AGCTACGCTGATAACGCCCTGGATGCGGAACGTGCCATCAAGTCGCGACC
TGATGTCAAGCAGCTAAAGGGTAAGAAGCTGGACGAAACAGTCCTGGAAG
GGACTGTTACTCTTTTGAAAGAAAGACTTGATGGGGATCTTACCCGCGGA
CTCATGCATAACGGGTTACCCCGGGGTGCGAAGAGAAGGCATGGTACCGG
GTCTGCAGATGCTACAAACAAAAAAGCACGAATGGACTACGTCGATGCTG
ATGAGGATGAGGATGAGGAGGAGAACGAATGGTCGGATGACGAGATGGGT
GGGGATACCACTCCCATGGAGGTGAGACTCTGCGTTATTCTCCTTTATAT
GTCTGTTTGACTAATGGGTTTGTTCAATCTAGTTGGCAATTGTTGTCCGC
GTGAACTATGAGAAACTCGACGTTGCTCTTCGGAATCGACGGTTTTTGGA
TCTTGCGGAGATGAACTCATCGCCAGTTACCGCACAGGTCTACGAGGGCC
TCCTACGACGCATAGAATACCAAACCAAACAATGCCGAGATAGTGCTGAG
ATACCCCGCGAAGGAGAGGAAGGCGAGCAATACTCCGTCCCCATCGCTCT
TAGTGCGGTGACAGAAGAAGTCGACCCGCAGTTGGACCTTGCAGGCTCCA
TAGGTCCCATGGAGATATCACAGGCCATCAACAAACGTGGGAAACGGCCT
CTGGAGGACAGTGTCAATGGAACCGACCGTGAAGGATCAGAAGCCCCCAG
CCGCACCTACGAGGTAGACCAACACCTTTCTCTGCTCTCGCAGCCCCCCT
ACAACCTCACATCCAAGCGCGTACTTTCCGGACTCATTACCTGGACCGTC
GAATTCCGACACCTAGCGCGCAAGCTCCGCCACCTAGAACTGGAACGAAT
GATTGAAGCCCGCTATGGCGACGTCGCTTTACGAGTGATCCGCGTACTCC
ACGCCAAGGGCAAGCTCGACGAGAAGCGCCTACAGGAAATCAGTCTCCTC
CCCTTCAAAGACCTGCGTCAAGTCCTCGCTAGCATGCAGTCCGGTGGGTT
TGTGGATCTGCAAGAAGTCCCCCGAGACGCACAGCGACAGCCCTCTCGTA
CGATCTACCTCTGGTACTATGATCCGGACCGCATCCGGAGCAGCATTCTG
GAGGACACGTACAAGGCTATGTCTAGGTGTATGCAACGCCTGCGGTTTGA
GCGGAACCGACTCAAGGAGTTCCTGGAGAAGACGGAGCGGAGTGACGTCA
AGGGCAATGAGGAGCGCTATCTGTCTCAGGCTGAGTTGACCCTGTTGGAG
CAGTGGAAGGCTAAAGAGGCCTTGTTGCTTGGGGAGGTGGCTCGGTTGGA
TGAGATGGTTGCGGTCATGCGAGACTACTGA back to topCoding sequence (CDS) from alignment at MCQH01000208:224978..227108- >ATCC10864_009117-T1 ID=ATCC10864_009117-T1|Name=ATCC10864_009117-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=7536bp|location=Sequence derived from alignment at MCQH01000208:224978..227108- (Aspergillus niger ATCC 10864)
TTGGCAATTGTTGTCCGCGTGAACTATGAGAAACTCGACGTTGCTCTTCG
GAATCGACGGTTTTTGGATCTTGCGGAGATGAACTCATCGCCAGTTACCG
CACAGGTCTACGAGGGCCTCCTACGACGCATAGAATACCAAACCAAACAA
TGCCGAGATAGTGCTGAGATACCCCGCGAAGGAGAGGAAGGCGAGCAATA
CTCCGTCCCCATCGCTCTTAGTGCGGTGACAGAAGAAGTCGACCCGCAGT
TGGACCTTGCAGGCTCCATAGGTCCCATGGAGATATCACAGGCCATCAAC
AAACGTGGGAAACGGCCTCTGGAGGACAGTGTCAATGGAACCGACCGTGA
AGGATCAGAAGCCCCCAGCCGCACCTACGAGGTAGACCAACACCTTTCTC
TGCTCTCGCAGCCCCCCTACAACCTCACATCCAAGCGCGTACTTTCCGGA
CTCATTACCTGGACCGTCGAATTCCGACACCTAGCGCGCAAGCTCCGCCA
CCTAGAACTGGAACGAATGATTGAAGCCCGCTATGGCGACGTCGCTTTAC
GAGTGATCCGCGTACTCCACGCCAAGGGCAAGCTCGACGAGAAGCGCCTA
CAGGAAATCAGTCTCCTCCCCTTCAAAGACCTGCGTCAAGTCCTCGCTAG
CATGCAGTCCGGTGGGTTTGTGGATCTGCAAGAAGTCCCCCGAGACGCAC
AGCGACAGCCCTCTCGTACGATCTACCTCTGGTACTATGATCCGGACCGC
ATCCGGAGCAGCATTCTGGAGGACACGTACAAGGCTATGTCTAGGTGTAT
GCAACGCCTGCGGTTTGAGCGGAACCGACTCAAGGAGTTCCTGGAGAAGA
CGGAGCGGAGTGACGTCAAGGGCAATGAGGAGCGCTATCTGTCTCAGGCT
GAGTTGACCCTGTTGGAGCAGTGGAAGGCTAAAGAGGCCTTGTTGCTTGG
GGAGGTGGCTCGGTTGGATGAGATGGTTGCGGTCATGCGAGACTACTGAC
GTATCTTCTCAACCCTCCAGCGCTATGACCGGCTCTCATTACCTCGTTTA
AAATTCTACTCGCGCCTCTCCGATCGTCAACTTCGTCATGGTCTATCTGC
CATGATTCAACACCACCTGGTGTACCATTACACATCCTACGACGATGGCG
TTACCTATTACGAACCAAACCTGCAGGCTGCGTACTATCTTGTTCGCTCC
GGCAAGATCCTGGAGTTCATCGAAGAACGGCTTGGGAAGTATGCGGCTAC
CCTTATGGAGACCATTATGTTTCTCGGACACGCACAAGTCGGCTACCTCG
AGACCCTCCCTGAACTGCAACCCGCACCACCTAAAGCGAATGGCGTGAAA
CAGGAAGCCGAAGGTGGAGAGTCCGAAGAACAAATGAATGGCGATGATGT
GCACACCTCCGACCAGCCGGCGCTTCTACATCCTACTCTGAAAGCACTGG
CTTCCCACGGTTATATCTTTCGTGTGCGCGATGCGCAATTCCAAAGCTAC
GCTGATAACGCCCTGGATGCGGAACGTGCCATCAAGTCGCGACCTGATGT
CAAGCAGCTAAAGGGTAAGAAGCTGGACGAAACAGTCCTGGAAGGGACTG
TTACTCTTTTGAAAGAAAGACTTGATGGGGATCTTACCCGCGGACTCATG
CATAACGGGTTACCCCGGGGTGCGAAGAGAAGGCATGGTACCGGGTCTGC
AGATGCTACAAACAAAAAAGCACGAATGGACTACGTCGATGCTGATGAGG
ATGAGGATGAGGAGGAGAACGAATGGTCGGATGACGAGATGGGTGGGGAT
ACCACTCCCATGGAGTACGCGGCGGAGCTATGTGCGCTCTTGGTCGAGGA
TAATTTCGGGGAGCTTTTTGCGATGACTTCTCAATTGGCAATTGTTGTCC
GCGTGAACTATGAGAAACTCGACGTTGCTCTTCGGAATCGACGGTTTTTG
GATCTTGCGGAGATGAACTCATCGCCAGTTACCGCACAGGTCTACGAGGG
CCTCCTACGACGCATAGAATACCAAACCAAACAATGCCGAGATAGTGCTG
AGATACCCCGCGAAGGAGAGGAAGGCGAGCAATACTCCGTCCCCATCGCT
CTTAGTGCGGTGACAGAAGAAGTCGACCCGCAGTTGGACCTTGCAGGCTC
CATAGGTCCCATGGAGATATCACAGGCCATCAACAAACGTGGGAAACGGC
CTCTGGAGGACAGTGTCAATGGAACCGACCGTGAAGGATCAGAAGCCCCC
AGCCGCACCTACGAGGTAGACCAACACCTTTCTCTGCTCTCGCAGCCCCC
CTACAACCTCACATCCAAGCGCGTACTTTCCGGACTCATTACCTGGACCG
TCGAATTCCGACACCTAGCGCGCAAGCTCCGCCACCTAGAACTGGAACGA
ATGATTGAAGCCCGCTATGGCGACGTCGCTTTACGAGTGATCCGCGTACT
CCACGCCAAGGGCAAGCTCGACGAGAAGCGCCTACAGGAAATCAGTCTCC
TCCCCTTCAAAGACCTGCGTCAAGTCCTCGCTAGCATGCAGTCCGGTGGG
TTTGTGGATCTGCAAGAAGTCCCCCGAGACGCACAGCGACAGCCCTCTCG
TACGATCTACCTCTGGTACTATGATCCGGACCGCATCCGGAGCAGCATTC
TGGAGGACACGTACAAGGCTATGTCTAGGTGTATGCAACGCCTGCGGTTT
GAGCGGAACCGACTCAAGGAGTTCCTGGAGAAGACGGAGCGGAGTGACGT
CAAGGGCAATGAGGAGCGCTATCTGTCTCAGGCTGAGTTGACCCTGTTGG
AGCAGTGGAAGGCTAAAGAGGCCTTGTTGCTTGGGGAGGTGGCTCGGTTG
GATGAGATGGTTGCGGTCATGCGAGACTACTGACGTATCTTCTCAACCCT
CCAGCGCTATGACCGGCTCTCATTACCTCGTTTAAAATTCTACTCGCGCC
TCTCCGATCGTCAACTTCGTCATGGTCTATCTGCCATGATTCAACACCAC
CTGGTGTACCATTACACATCCTACGACGATGGCGTTACCTATTACGAACC
AAACCTGCAGGCTGCGTACTATCTTGTTCGCTCCGGCAAGATCCTGGAGT
TCATCGAAGAACGGCTTGGGAAGTATGCGGCTACCCTTATGGAGACCATT
ATGTTTCTCGGACACGCACAAGTCGGCTACCTCGAGACCCTCCCTGAACT
GCAACCCGCACCACCTAAAGCGAATGGCGTGAAACAGGAAGCCGAAGGTG
GAGAGTCCGAAGAACAAATGAATGGCGATGATGTGCACACCTCCGACCAG
CCGGCGCTTCTACATCCTACTCTGAAAGCACTGGCTTCCCACGGTTATAT
CTTTCGTGTGCGCGATGCGCAATTCCAAAGCTACGCTGATAACGCCCTGG
ATGCGGAACGTGCCATCAAGTCGCGACCTGATGTCAAGCAGCTAAAGGGT
AAGAAGCTGGACGAAACAGTCCTGGAAGGGACTGTTACTCTTTTGAAAGA
AAGACTTGATGGGGATCTTACCCGCGGACTCATGCATAACGGGTTACCCC
GGGGTGCGAAGAGAAGGCATGGTACCGGGTCTGCAGATGCTACAAACAAA
AAAGCACGAATGGACTACGTCGATGCTGATGAGGATGAGGATGAGGAGGA
GAACGAATGGTCGGATGACGAGATGGGTGGGGATACCACTCCCATGGAGT
ACGCGGCGGAGCTATGTGCGCTCTTGGTCGAGGATAATTTCGGGGAGCTT
TTTGCGATGACTTCTCAATTGGCAATTGTTGTCCGCGTGAACTATGAGAA
ACTCGACGTTGCTCTTCGGAATCGACGGTTTTTGGATCTTGCGGAGATGA
ACTCATCGCCAGTTACCGCACAGGTCTACGAGGGCCTCCTACGACGCATA
GAATACCAAACCAAACAATGCCGAGATAGTGCTGAGATACCCCGCGAAGG
AGAGGAAGGCGAGCAATACTCCGTCCCCATCGCTCTTAGTGCGGTGACAG
AAGAAGTCGACCCGCAGTTGGACCTTGCAGGCTCCATAGGTCCCATGGAG
ATATCACAGGCCATCAACAAACGTGGGAAACGGCCTCTGGAGGACAGTGT
CAATGGAACCGACCGTGAAGGATCAGAAGCCCCCAGCCGCACCTACGAGG
TAGACCAACACCTTTCTCTGCTCTCGCAGCCCCCCTACAACCTCACATCC
AAGCGCGTACTTTCCGGACTCATTACCTGGACCGTCGAATTCCGACACCT
AGCGCGCAAGCTCCGCCACCTAGAACTGGAACGAATGATTGAAGCCCGCT
ATGGCGACGTCGCTTTACGAGTGATCCGCGTACTCCACGCCAAGGGCAAG
CTCGACGAGAAGCGCCTACAGGAAATCAGTCTCCTCCCCTTCAAAGACCT
GCGTCAAGTCCTCGCTAGCATGCAGTCCGGTGGGTTTGTGGATCTGCAAG
AAGTCCCCCGAGACGCACAGCGACAGCCCTCTCGTACGATCTACCTCTGG
TACTATGATCCGGACCGCATCCGGAGCAGCATTCTGGAGGACACGTACAA
GGCTATGTCTAGGTGTATGCAACGCCTGCGGTTTGAGCGGAACCGACTCA
AGGAGTTCCTGGAGAAGACGGAGCGGAGTGACGTCAAGGGCAATGAGGAG
CGCTATCTGTCTCAGGCTGAGTTGACCCTGTTGGAGCAGTGGAAGGCTAA
AGAGGCCTTGTTGCTTGGGGAGGTGGCTCGGTTGGATGAGATGGTTGCGG
TCATGCGAGACTACTGACGTATCTTCTCAACCCTCCAGCGCTATGACCGG
CTCTCATTACCTCGTTTAAAATTCTACTCGCGCCTCTCCGATCGTCAACT
TCGTCATGGTCTATCTGCCATGATTCAACACCACCTGGTGTACCATTACA
CATCCTACGACGATGGCGTTACCTATTACGAACCAAACCTGCAGGCTGCG
TACTATCTTGTTCGCTCCGGCAAGATCCTGGAGTTCATCGAAGAACGGCT
TGGGAAGTATGCGGCTACCCTTATGGAGACCATTATGTTTCTCGGACACG
CACAAGTCGGCTACCTCGAGACCCTCCCTGAACTGCAACCCGCACCACCT
AAAGCGAATGGCGTGAAACAGGAAGCCGAAGGTGGAGAGTCCGAAGAACA
AATGAATGGCGATGATGTGCACACCTCCGACCAGCCGGCGCTTCTACATC
CTACTCTGAAAGCACTGGCTTCCCACGGTTATATCTTTCGTGTGCGCGAT
GCGCAATTCCAAAGCTACGCTGATAACGCCCTGGATGCGGAACGTGCCAT
CAAGTCGCGACCTGATGTCAAGCAGCTAAAGGGTAAGAAGCTGGACGAAA
CAGTCCTGGAAGGGACTGTTACTCTTTTGAAAGAAAGACTTGATGGGGAT
CTTACCCGCGGACTCATGCATAACGGGTTACCCCGGGGTGCGAAGAGAAG
GCATGGTACCGGGTCTGCAGATGCTACAAACAAAAAAGCACGAATGGACT
ACGTCGATGCTGATGAGGATGAGGATGAGGAGGAGAACGAATGGTCGGAT
GACGAGATGGGTGGGGATACCACTCCCATGGAGTACGCGGCGGAGCTATG
TGCGCTCTTGGTCGAGGATAATTTCGGGGAGCTTTTTGCGATGACTTCTC
AATTGGCAATTGTTGTCCGCGTGAACTATGAGAAACTCGACGTTGCTCTT
CGGAATCGACGGTTTTTGGATCTTGCGGAGATGAACTCATCGCCAGTTAC
CGCACAGGTCTACGAGGGCCTCCTACGACGCATAGAATACCAAACCAAAC
AATGCCGAGATAGTGCTGAGATACCCCGCGAAGGAGAGGAAGGCGAGCAA
TACTCCGTCCCCATCGCTCTTAGTGCGGTGACAGAAGAAGTCGACCCGCA
GTTGGACCTTGCAGGCTCCATAGGTCCCATGGAGATATCACAGGCCATCA
ACAAACGTGGGAAACGGCCTCTGGAGGACAGTGTCAATGGAACCGACCGT
GAAGGATCAGAAGCCCCCAGCCGCACCTACGAGGTAGACCAACACCTTTC
TCTGCTCTCGCAGCCCCCCTACAACCTCACATCCAAGCGCGTACTTTCCG
GACTCATTACCTGGACCGTCGAATTCCGACACCTAGCGCGCAAGCTCCGC
CACCTAGAACTGGAACGAATGATTGAAGCCCGCTATGGCGACGTCGCTTT
ACGAGTGATCCGCGTACTCCACGCCAAGGGCAAGCTCGACGAGAAGCGCC
TACAGGAAATCAGTCTCCTCCCCTTCAAAGACCTGCGTCAAGTCCTCGCT
AGCATGCAGTCCGGTGGGTTTGTGGATCTGCAAGAAGTCCCCCGAGACGC
ACAGCGACAGCCCTCTCGTACGATCTACCTCTGGTACTATGATCCGGACC
GCATCCGGAGCAGCATTCTGGAGGACACGTACAAGGCTATGTCTAGGTGT
ATGCAACGCCTGCGGTTTGAGCGGAACCGACTCAAGGAGTTCCTGGAGAA
GACGGAGCGGAGTGACGTCAAGGGCAATGAGGAGCGCTATCTGTCTCAGG
CTGAGTTGACCCTGTTGGAGCAGTGGAAGGCTAAAGAGGCCTTGTTGCTT
GGGGAGGTGGCTCGGTTGGATGAGATGGTTGCGGTCATGCGAGACTACTG
ACGTATCTTCTCAACCCTCCAGCGCTATGACCGGCTCTCATTACCTCGTT
TAAAATTCTACTCGCGCCTCTCCGATCGTCAACTTCGTCATGGTCTATCT
GCCATGATTCAACACCACCTGGTGTACCATTACACATCCTACGACGATGG
CGTTACCTATTACGAACCAAACCTGCAGGCTGCGTACTATCTTGTTCGCT
CCGGCAAGATCCTGGAGTTCATCGAAGAACGGCTTGGGAAGTATGCGGCT
ACCCTTATGGAGACCATTATGTTTCTCGGACACGCACAAGTCGGCTACCT
CGAGACCCTCCCTGAACTGCAACCCGCACCACCTAAAGCGAATGGCGTGA
AACAGGAAGCCGAAGGTGGAGAGTCCGAAGAACAAATGAATGGCGATGAT
GTGCACACCTCCGACCAGCCGGCGCTTCTACATCCTACTCTGAAAGCACT
GGCTTCCCACGGTTATATCTTTCGTGTGCGCGATGCGCAATTCCAAAGCT
ACGCTGATAACGCCCTGGATGCGGAACGTGCCATCAAGTCGCGACCTGAT
GTCAAGCAGCTAAAGGGTAAGAAGCTGGACGAAACAGTCCTGGAAGGGAC
TGTTACTCTTTTGAAAGAAAGACTTGATGGGGATCTTACCCGCGGACTCA
TGCATAACGGGTTACCCCGGGGTGCGAAGAGAAGGCATGGTACCGGGTCT
GCAGATGCTACAAACAAAAAAGCACGAATGGACTACGTCGATGCTGATGA
GGATGAGGATGAGGAGGAGAACGAATGGTCGGATGACGAGATGGGTGGGG
ATACCACTCCCATGGAGTACGCGGCGGAGCTATGTGCGCTCTTGGTCGAG
GATAATTTCGGGGAGCTTTTTGCGATGACTTCTCAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005666 | RNA polymerase III complex |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
| GO:0003697 | single-stranded DNA binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| PFAM | PF08221 |
| InterPro | IPR036388 |
| InterPro | IPR013197 |
| InterPro | IPR039748 |
| InterPro | IPR008806 |
| InterPro | IPR036390 |
| PFAM | PF05645 |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092610QT |
| Product | RNA polymerase III subunit C82 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000208 | supercontig | MCQH01000208:224978..227108 - |
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