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ATCC10864_009798-T1, ATCC10864_009798-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_009798-T1
Unique NameATCC10864_009798-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000219:104603..105440+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_009798-T1 ID=ATCC10864_009798-T1|Name=ATCC10864_009798-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=838bp|location=Sequence derived from alignment at MCQH01000219:104603..105440+ (Aspergillus niger ATCC 10864)
ATGGGTCCGCAGCTGAAGATGTTCTCGGGGCCTCAGATGGCCTTCCTCCG
GCCGTCGTGTGAGATTCCCGCAAGCCTCCCCAAGAAAAGTTTTTTATATC
CTGACTCCGATGCCGTACAGTAGGTCTGTCGACGCCATTCACGGCTTTCC
CTCTATCGCGATGCTTCTCGACGACTTCGCCTGCCCTCGATTGGCTTACC
CCTAAGTTCGCCGAGAGATCCAAGTCCCCTAAAGGTCGTCCGCATGTCGC
AACTGGTGGTTCTTCCCGCGGTACTACCGTCGTCTGGGGTGATTATGGCT
TGCGGATGAAGGACCACGACCGTCGGTTGCCCGCTGCCTCGTTGAAAATT
GCGGAGGATACGATTAAGAGACGTCTGAGGGGTATGAACTACACATTGTA
CAAGCGCGTGAGCGCAAACATCGGTGTCTACACCAAGGGTAACGAACAAC
GTATGGGTAAGGGTAAGGGAAAGTTCGACTACTGGACGGCGAAGGTTGGC
GTGAGCAGAATTGTCTTTGAGCTCAAGGGTGATCTGCACGAAAAGGTCGC
CAGGGAGGCCTTCCGTCTGGCCGGCCACAAGCTGCCCGGTACGTTACATC
CACCTGATGATATTCTCCAATTATCAACATACGGTAAACTAATTATACAA
CGGCTGCAGGCCTCTGGGAATTCGTGAAGAAGGGTGACCCGCCGGTCGTT
GGACTGACGAAACTTGGCAACGGAGTGACTCTGGAGAGCCTCAAACGCGC
ACGCAGAAGCCCGGCCCTCGGTACTCAGGACCTACCGAACCCCCCGACCT
CGACCTCGTCCTCCTCCAGTCCCTCTGCTCCCCAATAA
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Coding sequence (CDS) from alignment at MCQH01000219:104603..105440+

>ATCC10864_009798-T1 ID=ATCC10864_009798-T1|Name=ATCC10864_009798-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2115bp|location=Sequence derived from alignment at MCQH01000219:104603..105440+ (Aspergillus niger ATCC 10864)
ATGGGTCCGCAGCTGAAGATGTTCTCGGGGCCTCAGATGGCCTTCCTCCG
GCCGTCGTTAGGTCTGTCGACGCCATTCACGGCTTTCCCTCTATCGCGAT
GCTTCTCGACGACTTCGCCTGCCCTCGATTGGCTTACCCCTAAGTTCGCC
GAGAGATCCAAGTCCCCTAAAGGTCGTCCGCATGTCGCAACTGGTGGTTC
TTCCCGCGGTACTACCGTCGTCTGGGGTGATTATGGCTTGCGGATGAAGG
ACCACGACCGTCGGTTGCCCGCTGCCTCGTTGAAAATTGCGGAGGATACG
ATTAAGAGACGTCTGAGGGGTATGAACTACACATTGTACAAGCGCGTGAG
CGCAAACATCGGTGTCTACACCAAGGGTAACGAACAACGTATGGGTAAGG
GTAAGGGAAAGTTCGACTACTGGACGGCGAAGGTTGGCGTGAGCAGAATT
GTCTTTGAGCTCAAGGGTGATCTGCACGAAAAGGTCGCCAGGGAGGCCTT
CCGTCTGGCCGGCCACAAGCTGCCCGGCCTCTGGGAATTCGTGAAGAAGG
GTGACCCGCCGGTCGTTGGACTGACGAAACTTGGCAACGGAGTGACTCTG
GAGAGCCTCAAACGCGCACGCAGAAGCCCGGCCCTCGGTACTCAGGACCT
ACCGAACCCCCCGACCTCGACCTCGTCCTCCTCCAGTCCCTCTGCTCCCC
AATAAATGGGTCCGCAGCTGAAGATGTTCTCGGGGCCTCAGATGGCCTTC
CTCCGGCCGTCGTTAGGTCTGTCGACGCCATTCACGGCTTTCCCTCTATC
GCGATGCTTCTCGACGACTTCGCCTGCCCTCGATTGGCTTACCCCTAAGT
TCGCCGAGAGATCCAAGTCCCCTAAAGGTCGTCCGCATGTCGCAACTGGT
GGTTCTTCCCGCGGTACTACCGTCGTCTGGGGTGATTATGGCTTGCGGAT
GAAGGACCACGACCGTCGGTTGCCCGCTGCCTCGTTGAAAATTGCGGAGG
ATACGATTAAGAGACGTCTGAGGGGTATGAACTACACATTGTACAAGCGC
GTGAGCGCAAACATCGGTGTCTACACCAAGGGTAACGAACAACGTATGGG
TAAGGGTAAGGGAAAGTTCGACTACTGGACGGCGAAGGTTGGCGTGAGCA
GAATTGTCTTTGAGCTCAAGGGTGATCTGCACGAAAAGGTCGCCAGGGAG
GCCTTCCGTCTGGCCGGCCACAAGCTGCCCGGCCTCTGGGAATTCGTGAA
GAAGGGTGACCCGCCGGTCGTTGGACTGACGAAACTTGGCAACGGAGTGA
CTCTGGAGAGCCTCAAACGCGCACGCAGAAGCCCGGCCCTCGGTACTCAG
GACCTACCGAACCCCCCGACCTCGACCTCGTCCTCCTCCAGTCCCTCTGC
TCCCCAATAAATGGGTCCGCAGCTGAAGATGTTCTCGGGGCCTCAGATGG
CCTTCCTCCGGCCGTCGTTAGGTCTGTCGACGCCATTCACGGCTTTCCCT
CTATCGCGATGCTTCTCGACGACTTCGCCTGCCCTCGATTGGCTTACCCC
TAAGTTCGCCGAGAGATCCAAGTCCCCTAAAGGTCGTCCGCATGTCGCAA
CTGGTGGTTCTTCCCGCGGTACTACCGTCGTCTGGGGTGATTATGGCTTG
CGGATGAAGGACCACGACCGTCGGTTGCCCGCTGCCTCGTTGAAAATTGC
GGAGGATACGATTAAGAGACGTCTGAGGGGTATGAACTACACATTGTACA
AGCGCGTGAGCGCAAACATCGGTGTCTACACCAAGGGTAACGAACAACGT
ATGGGTAAGGGTAAGGGAAAGTTCGACTACTGGACGGCGAAGGTTGGCGT
GAGCAGAATTGTCTTTGAGCTCAAGGGTGATCTGCACGAAAAGGTCGCCA
GGGAGGCCTTCCGTCTGGCCGGCCACAAGCTGCCCGGCCTCTGGGAATTC
GTGAAGAAGGGTGACCCGCCGGTCGTTGGACTGACGAAACTTGGCAACGG
AGTGACTCTGGAGAGCCTCAAACGCGCACGCAGAAGCCCGGCCCTCGGTA
CTCAGGACCTACCGAACCCCCCGACCTCGACCTCGTCCTCCTCCAGTCCC
TCTGCTCCCCAATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
GO:0019843rRNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_009798ATCC10864_009798Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009798-T1.exon1ATCC10864_009798-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_009798-T1.exon2ATCC10864_009798-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_009798-T1.exon3ATCC10864_009798-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009798-T1.cdsATCC10864_009798-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009798-T1ATCC10864_009798-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR016180
PFAMPF00252
InterProIPR020798
InterProIPR000114
InterProIPR036920
Properties
Property NameValue
NoteBUSCO:EOG09264T3S
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000219supercontigMCQH01000219:104603..105440 +
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