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ATCC10864_011745-T1, ATCC10864_011745-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_011745-T1
Unique NameATCC10864_011745-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000306:346089..346764+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_011745-T1 ID=ATCC10864_011745-T1|Name=ATCC10864_011745-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=676bp|location=Sequence derived from alignment at MCQH01000306:346089..346764+ (Aspergillus niger ATCC 10864)
ATGTCTTTCGCCGCCCGATCCCTCCGCCCCTTCGCTTCTCGCGTCCTGTC
GCAGAAGCTCCCCCTCTCTTCCGTCTGCAGGGCCGCACCCGCCAGTTTCC
CGCGGGGAAGTGTCCGGAGCTTCTCCCAGAGCCCACTTTGTGAGCAACCC
CCTTGATCTCAGTCGCATGAGGGCATTCGGACCTCCTATATTCAATGCAA
AGCTAATGGTTGACCCCCGACAGCTCAATTGAAGAAGTACACCGAGTCGC
ACGAGTGGATCGAGCTCGCCGCCGACGGCAAGACTGGTTCGTCTACCACA
GCCCTTTCCCGGCCAAACAACACTCAATTAATTACTAACGCTTTCTTCTA
TCTCTGCAGCCAAGATCGGCATTACTGAATACGCTGCCAAGTCCCTTGGT
GACGTTGTGTTCGTTGAGCTCCCCGAGGTTAATCTGGAGGTTAGCGCCGG
TGAGCCCGTCGGTGCTGTTGAGTCCGTCAAGTCCGCTTCGGACGTCCTTT
CTCCTGTCTCGGGAACTGTTACGCAGGGCAATACTGTGCTGGATGACAAT
GCCAAGTTCATCAACCAGAGCCCCGAGGGTGACGCCTGGATTGCGGAGAT
CGAGGTGAACGATGTCGCGGAGTTGGACGCACTTTTGGACGAGGCTGCTT
ACAAGGCTACTATCGATGAGGAGTAA
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Coding sequence (CDS) from alignment at MCQH01000306:346089..346764+

>ATCC10864_011745-T1 ID=ATCC10864_011745-T1|Name=ATCC10864_011745-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1557bp|location=Sequence derived from alignment at MCQH01000306:346089..346764+ (Aspergillus niger ATCC 10864)
ATGTCTTTCGCCGCCCGATCCCTCCGCCCCTTCGCTTCTCGCGTCCTGTC
GCAGAAGCTCCCCCTCTCTTCCGTCTGCAGGGCCGCACCCGCCAGTTTCC
CGCGGGGAAGTGTCCGGAGCTTCTCCCAGAGCCCACTTTCTCAATTGAAG
AAGTACACCGAGTCGCACGAGTGGATCGAGCTCGCCGCCGACGGCAAGAC
TGCCAAGATCGGCATTACTGAATACGCTGCCAAGTCCCTTGGTGACGTTG
TGTTCGTTGAGCTCCCCGAGGTTAATCTGGAGGTTAGCGCCGGTGAGCCC
GTCGGTGCTGTTGAGTCCGTCAAGTCCGCTTCGGACGTCCTTTCTCCTGT
CTCGGGAACTGTTACGCAGGGCAATACTGTGCTGGATGACAATGCCAAGT
TCATCAACCAGAGCCCCGAGGGTGACGCCTGGATTGCGGAGATCGAGGTG
AACGATGTCGCGGAGTTGGACGCACTTTTGGACGAGGCTGCTTACAAGGC
TACTATCGATGAGGAGTAAATGTCTTTCGCCGCCCGATCCCTCCGCCCCT
TCGCTTCTCGCGTCCTGTCGCAGAAGCTCCCCCTCTCTTCCGTCTGCAGG
GCCGCACCCGCCAGTTTCCCGCGGGGAAGTGTCCGGAGCTTCTCCCAGAG
CCCACTTTCTCAATTGAAGAAGTACACCGAGTCGCACGAGTGGATCGAGC
TCGCCGCCGACGGCAAGACTGCCAAGATCGGCATTACTGAATACGCTGCC
AAGTCCCTTGGTGACGTTGTGTTCGTTGAGCTCCCCGAGGTTAATCTGGA
GGTTAGCGCCGGTGAGCCCGTCGGTGCTGTTGAGTCCGTCAAGTCCGCTT
CGGACGTCCTTTCTCCTGTCTCGGGAACTGTTACGCAGGGCAATACTGTG
CTGGATGACAATGCCAAGTTCATCAACCAGAGCCCCGAGGGTGACGCCTG
GATTGCGGAGATCGAGGTGAACGATGTCGCGGAGTTGGACGCACTTTTGG
ACGAGGCTGCTTACAAGGCTACTATCGATGAGGAGTAAATGTCTTTCGCC
GCCCGATCCCTCCGCCCCTTCGCTTCTCGCGTCCTGTCGCAGAAGCTCCC
CCTCTCTTCCGTCTGCAGGGCCGCACCCGCCAGTTTCCCGCGGGGAAGTG
TCCGGAGCTTCTCCCAGAGCCCACTTTCTCAATTGAAGAAGTACACCGAG
TCGCACGAGTGGATCGAGCTCGCCGCCGACGGCAAGACTGCCAAGATCGG
CATTACTGAATACGCTGCCAAGTCCCTTGGTGACGTTGTGTTCGTTGAGC
TCCCCGAGGTTAATCTGGAGGTTAGCGCCGGTGAGCCCGTCGGTGCTGTT
GAGTCCGTCAAGTCCGCTTCGGACGTCCTTTCTCCTGTCTCGGGAACTGT
TACGCAGGGCAATACTGTGCTGGATGACAATGCCAAGTTCATCAACCAGA
GCCCCGAGGGTGACGCCTGGATTGCGGAGATCGAGGTGAACGATGTCGCG
GAGTTGGACGCACTTTTGGACGAGGCTGCTTACAAGGCTACTATCGATGA
GGAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005960glycine cleavage complex
Vocabulary: Biological Process
TermDefinition
GO:0019464glycine decarboxylation via glycine cleavage system
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_011745ATCC10864_011745Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011745-T1.exon1ATCC10864_011745-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_011745-T1.exon2ATCC10864_011745-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_011745-T1.exon3ATCC10864_011745-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011745-T1.cdsATCC10864_011745-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011745-T1ATCC10864_011745-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF01597
InterProIPR002930
InterProIPR033753
InterProIPR000089
InterProIPR003016
InterProIPR017453
InterProIPR011053
Properties
Property NameValue
NoteBUSCO:EOG09264SUZ
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000306supercontigMCQH01000306:346089..346764 +
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