You are here

Home

ATCC64974_14930-T1, ATCC64974_14930-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_14930-T1
Unique NameATCC64974_14930-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:1105687..1106822-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_14930-T1 ID=ATCC64974_14930-T1|Name=ATCC64974_14930-T1|organism=Aspergillus niger N402|type=mRNA|length=1136bp|location=Sequence derived from alignment at OGUI01000003.1:1105687..1106822- (Aspergillus niger N402)
ATGACCGCAAGGCGCCACAGGATTGACTTCTCCCTGCGAAGACGACGTAA
CGACTTGTCGAATACGTCGTCTGGCAGTATCTCTCCACCAGTACCTATTC
TCCAGTCGCCCGTCACGTTCCAAGCGTTCGCATCAGTCAGCGTCTCCGAG
GCAACACTCAAGCAGAAGAACAAATTAGAAAGGGATCCCGTGAGGCCGTC
TATGTTCCTGGAAGAGAAGGACGACGATGAGGCCCCGAATTCTGCTCTGA
CTGGCGGTGCACCACTGGATGTCAAGCCAGTTCATATAGAGCGTAAGAGT
GTGGAGGAGAAGCCGATGACTCGAACGAAAAGCCAGTACTTCGAAGACGC
CTTCAGCACTAGGGGCCCGTTGACCTCACCCAGAACTCAAATCAGCCAGG
ATTCTGTCGTGGTGGTAGAGATCAAGACCAACACCAAGGTGCGTGAGGGT
GGGCTTCAGTCAAAATTTCCAGTAACGAGAGGACTTTTTTTGGGCTACCA
TTCTCATGCAAGGCGTAGGTCAAAGAAGTGGAGTCACTCGTCTCGAACAT
TTCGTCCCATATGGCACGCATCTTTCAGAAATCCGAAACCCTTATGATGA
CCACCATCCAAGAGGATGCATGCATCCAATTCGGCAGAGTAAACCTGCCA
GCCTACCTGATGAAAGTCTTTGCACTGCCGTATCTCATCGCGCCAATAAC
CAACCTTCGTAGCACTATTCTGATCCAGGCAGCTCTTCAGGAAATTCTTC
ACGTGGCTCCAAACCGAGGAGTCATCTTATATATTCCAATCCCAGAGGAA
AATTTCGCGACCAACGGGGTTACCATGATGGGTGAAATTGCACGACTGGA
GCGCTCTTCCCCGGATCACGGCTCCGGTTTATTCAAAACTGTCTCACGAA
CCATGAGTCGAAGACTGAAATCTACCAGTTCACAGAGCGCTCCTATTTCG
GTTGCAACCACCTCTTCGTGGGCCTGTGGGGGCACACAGGCGCCATCTCC
CGAGAAAGAATCACAAGCTAGTGATGCTACGGACGGCGATGTCAGGTCGA
AGTCAAGTACAAAATCCAGGGGCTTTCGTCACTTCCTTTCCCGTCAGGGA
ACAGAACGGAATGAAAAGTCCGGGAATACGCAGTAG
back to top

Coding sequence (CDS) from alignment at OGUI01000003.1:1105687..1106822-

>ATCC64974_14930-T1 ID=ATCC64974_14930-T1|Name=ATCC64974_14930-T1|organism=Aspergillus niger N402|type=CDS|length=2112bp|location=Sequence derived from alignment at OGUI01000003.1:1105687..1106822- (Aspergillus niger N402)
GTCAAAGAAGTGGAGTCACTCGTCTCGAACATTTCGTCCCATATGGCACG
CATCTTTCAGAAATCCGAAACCCTTATGATGACCACCATCCAAGAGGATG
CATGCATCCAATTCGGCAGAGTAAACCTGCCAGCCTACCTGATGAAAGTC
TTTGCACTGCCGTATCTCATCGCGCCAATAACCAACCTTCGTAGCACTAT
TCTGATCCAGGCAGCTCTTCAGGAAATTCTTCACGTGGCTCCAAACCGAG
GAGTCATCTTATATATTCCAATCCCAGAGGAAAATTTCGCGACCAACGGG
GTTACCATGATGGGTGAAATTGCACGACTGGAGCGCTCTTCCCCGGATCA
CGGCTCCGGTTTATTCAAAACTGTCTCACGAACCATGAGTCGAAGACTGA
AATCTACCAGTTCACAGAGCGCTCCTATTTCGGTTGCAACCACCTCTTCG
TGGGCCTGTGGGGGCACACAGGCGCCATCTCCCGAGAAAGAATCACAAGC
TAGTGATGCTACGGACGGCGATGTCAGGTCGAAGTCAAGTACAAAATCCA
GGGGCTTTCGTCACTTCCTTTCCCGTCAGGGAACAGAACGGAATGAAAAG
TCCGGGAATACGCAGTAGATGACCGCAAGGCGCCACAGGATTGACTTCTC
CCTGCGAAGACGACGTAACGACTTGTCGAATACGTCGTCTGGCAGTATCT
CTCCACCAGTACCTATTCTCCAGTCGCCCGTCACGTTCCAAGCGTTCGCA
TCAGTCAGCGTCTCCGAGGCAACACTCAAGCAGAAGAACAAATTAGAAAG
GGATCCCGTGAGGCCGTCTATGTTCCTGGAAGAGAAGGACGACGATGAGG
CCCCGAATTCTGCTCTGACTGGCGGTGCACCACTGGATGTCAAGCCAGTT
CATATAGAGCGTAAGAGTGTGGAGGAGAAGCCGATGACTCGAACGAAAAG
CCAGTACTTCGAAGACGCCTTCAGCACTAGGGGCCCGTTGACCTCACCCA
GAACTCAAATCAGCCAGGATTCTGTCGTGGTGGTAGAGATCAAGACCAAC
ACCAAGGTCAAAGAAGTGGAGTCACTCGTCTCGAACATTTCGTCCCATAT
GGCACGCATCTTTCAGAAATCCGAAACCCTTATGATGACCACCATCCAAG
AGGATGCATGCATCCAATTCGGCAGAGTAAACCTGCCAGCCTACCTGATG
AAAGTCTTTGCACTGCCGTATCTCATCGCGCCAATAACCAACCTTCGTAG
CACTATTCTGATCCAGGCAGCTCTTCAGGAAATTCTTCACGTGGCTCCAA
ACCGAGGAGTCATCTTATATATTCCAATCCCAGAGGAAAATTTCGCGACC
AACGGGGTTACCATGATGGGTGAAATTGCACGACTGGAGCGCTCTTCCCC
GGATCACGGCTCCGGTTTATTCAAAACTGTCTCACGAACCATGAGTCGAA
GACTGAAATCTACCAGTTCACAGAGCGCTCCTATTTCGGTTGCAACCACC
TCTTCGTGGGCCTGTGGGGGCACACAGGCGCCATCTCCCGAGAAAGAATC
ACAAGCTAGTGATGCTACGGACGGCGATGTCAGGTCGAAGTCAAGTACAA
AATCCAGGGGCTTTCGTCACTTCCTTTCCCGTCAGGGAACAGAACGGAAT
GAAAAGTCCGGGAATACGCAGTAGATGACCGCAAGGCGCCACAGGATTGA
CTTCTCCCTGCGAAGACGACGTAACGACTTGTCGAATACGTCGTCTGGCA
GTATCTCTCCACCAGTACCTATTCTCCAGTCGCCCGTCACGTTCCAAGCG
TTCGCATCAGTCAGCGTCTCCGAGGCAACACTCAAGCAGAAGAACAAATT
AGAAAGGGATCCCGTGAGGCCGTCTATGTTCCTGGAAGAGAAGGACGACG
ATGAGGCCCCGAATTCTGCTCTGACTGGCGGTGCACCACTGGATGTCAAG
CCAGTTCATATAGAGCGTAAGAGTGTGGAGGAGAAGCCGATGACTCGAAC
GAAAAGCCAGTACTTCGAAGACGCCTTCAGCACTAGGGGCCCGTTGACCT
CACCCAGAACTCAAATCAGCCAGGATTCTGTCGTGGTGGTAGAGATCAAG
ACCAACACCAAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_14930ATCC64974_14930Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_14930-T1ATCC64974_14930-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_14930-T1.cdsATCC64974_14930-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_14930-T1.exon2ATCC64974_14930-T1.exon2Aspergillus niger N402exon
ATCC64974_14930-T1.exon1ATCC64974_14930-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR014347
DBxrefInterPro:IPR001398
DBxrefPFAM:PF01187
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:1105687..1106822 -
Powered by Drupal