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ATCC64974_17800-T1, ATCC64974_17800-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_17800-T1
Unique NameATCC64974_17800-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:1989796..1991478-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_17800-T1 ID=ATCC64974_17800-T1|Name=ATCC64974_17800-T1|organism=Aspergillus niger N402|type=mRNA|length=1683bp|location=Sequence derived from alignment at OGUI01000003.1:1989796..1991478- (Aspergillus niger N402)
ATGTCGACGACCACCACTGCTGTCACCAGTGAGGTCGGCTCACTACGCCT
CTCCGCCGAGGAAGTCCGACTTCCAGCTCCTCGCGATGACCGAAAGTCGC
GCTTACAACAAGTCGTCGTGATCACCCAGCTGTTTGCCGTCACTCTCACA
GCCAGTGTAATCAATGGCTTGGTGGTAGTCGGACTCCCCACCATCACTGC
AGACCTCCAGCTGCCTCCTTCGCTTTCCCTCTGGCCCTCCTCGGTATGCA
GTCTCGCCACGGCCTCTACACTTCTTCTATCCGGCTCAATTGCCGACACC
ATCGGCCCTCGATGGGTGGAACTGGTGGGATCTCTCGCCAGCGGTGCATT
GATGCTCGGACAGGGCCTATCGCAAACTGGCATTGAGCTGGTCATCATGC
GAGCCTTCCAAGGTGTGGGCCTCTCAATGCACCTTGCATCATCGGTGTCC
ATCGTCACCCAGCTTTTACCTCCTGGAAAAGGCCGTAACCTGGCATTCTC
CTGCATAGGCCTGAGCCAGCCATTGGGCTTCTCACTGGGTCTAGTAGTAG
GCGGCATCCTGATCGACACTATCGGCTGGCGCGCAGGCTGGTACATCGCC
GGGGGAATCACTCTCTTCTTCACCGTCATCGGACTGTGGTCGTTACCCAA
GAGCCCTGTCCAGCGAGACGGACACATCCTCCGCAATGTGCGGACTAAGA
TCGACTGGGTGGGAGCTGGACTAGCATCAGCATTCATGGCCTTGCTCTGC
TACTTGCTCGCGTGAGTATCCCCTAAAACCTCAAAAGCCAACACTCTACC
CCAATCTAACCCATATACCCCAACACAGCATCCTCAGCGCAAACCCCTCC
CGCATCCGCTCCGCAGAAAGCATCATCATCCTCTGCGTCGCCGCCATCGC
CCTCCCCACCTTCATCACCTGGGTGCACTTCCAAGTAAAGCGCGGCAAAC
CAGCATTAATCCCCAACGCACTATGGAAAAACACCTCTTTCTCGAGCATC
TGCGCCACAGTGGCCCTCTCCAACGCCGTAATCAACTCCATGGAACTCTT
CGCCAGTCTATTGTACGTCCCCCAATCCCCAACCCCACACACCCATTCCC
CAAAACCCACTAACAAAACCACCCTCAAACCAGCTTCCAAGAAATCCAGT
CCCTCAGCGCCCTCGGCGCCTCCATCCGCATCCTCCCCAGCCTAATCGTC
GGGGTCCTAATCAACCTCGTAATTGGCTTCTTCGTGCACCGCATCCCCGC
CTACTGGATCGTAACCATCACCTCCTTCTTCTGCGCCCTCTCCCCGCTCC
TCATGGCCGTCATCGACCCAACCCAGACATACTGGGCGAATGCCTTCGTC
GCGCAGCTCCTGCAGCCTATCAGCGCGGACGCGCTCTTCACGGTGGGGTT
GATCGTCATCACGAATGTGTTTCCGGATGATACGCAGGCGTTGGCGGGAG
CGGTGTTTAATACCTCGGCGCAGTTTGGGAGTGCGTTGGGCATGGCGGTG
TTGCAGGTGATTTCGACGGTGGTGAGTGAAGAGAGGGAAAAGGGTGGGGA
GGGAGAGAAGAAGGCGTTGATGGAGGGATATCGGGCGAGTTTTTGGACCA
TGTTTGGGTTGATGGTGGTTTGTACGGCGGTTGGGTTTTGGGGGTTGAGG
AGGTCTGGGAGGGTGGGGTTGAAGAGGGATTAG
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Coding sequence (CDS) from alignment at OGUI01000003.1:1989796..1991478-

>ATCC64974_17800-T1 ID=ATCC64974_17800-T1|Name=ATCC64974_17800-T1|organism=Aspergillus niger N402|type=CDS|length=4635bp|location=Sequence derived from alignment at OGUI01000003.1:1989796..1991478- (Aspergillus niger N402)
CTTCCAAGAAATCCAGTCCCTCAGCGCCCTCGGCGCCTCCATCCGCATCC
TCCCCAGCCTAATCGTCGGGGTCCTAATCAACCTCGTAATTGGCTTCTTC
GTGCACCGCATCCCCGCCTACTGGATCGTAACCATCACCTCCTTCTTCTG
CGCCCTCTCCCCGCTCCTCATGGCCGTCATCGACCCAACCCAGACATACT
GGGCGAATGCCTTCGTCGCGCAGCTCCTGCAGCCTATCAGCGCGGACGCG
CTCTTCACGGTGGGGTTGATCGTCATCACGAATGTGTTTCCGGATGATAC
GCAGGCGTTGGCGGGAGCGGTGTTTAATACCTCGGCGCAGTTTGGGAGTG
CGTTGGGCATGGCGGTGTTGCAGGTGATTTCGACGGTGGTGAGTGAAGAG
AGGGAAAAGGGTGGGGAGGGAGAGAAGAAGGCGTTGATGGAGGGATATCG
GGCGAGTTTTTGGACCATGTTTGGGTTGATGGTGGTTTGTACGGCGGTTG
GGTTTTGGGGGTTGAGGAGGTCTGGGAGGGTGGGGTTGAAGAGGGATTAG
CATCCTCAGCGCAAACCCCTCCCGCATCCGCTCCGCAGAAAGCATCATCA
TCCTCTGCGTCGCCGCCATCGCCCTCCCCACCTTCATCACCTGGGTGCAC
TTCCAAGTAAAGCGCGGCAAACCAGCATTAATCCCCAACGCACTATGGAA
AAACACCTCTTTCTCGAGCATCTGCGCCACAGTGGCCCTCTCCAACGCCG
TAATCAACTCCATGGAACTCTTCGCCAGTCTATTATGTCGACGACCACCA
CTGCTGTCACCAGTGAGGTCGGCTCACTACGCCTCTCCGCCGAGGAAGTC
CGACTTCCAGCTCCTCGCGATGACCGAAAGTCGCGCTTACAACAAGTCGT
CGTGATCACCCAGCTGTTTGCCGTCACTCTCACAGCCAGTGTAATCAATG
GCTTGGTGGTAGTCGGACTCCCCACCATCACTGCAGACCTCCAGCTGCCT
CCTTCGCTTTCCCTCTGGCCCTCCTCGGTATGCAGTCTCGCCACGGCCTC
TACACTTCTTCTATCCGGCTCAATTGCCGACACCATCGGCCCTCGATGGG
TGGAACTGGTGGGATCTCTCGCCAGCGGTGCATTGATGCTCGGACAGGGC
CTATCGCAAACTGGCATTGAGCTGGTCATCATGCGAGCCTTCCAAGGTGT
GGGCCTCTCAATGCACCTTGCATCATCGGTGTCCATCGTCACCCAGCTTT
TACCTCCTGGAAAAGGCCGTAACCTGGCATTCTCCTGCATAGGCCTGAGC
CAGCCATTGGGCTTCTCACTGGGTCTAGTAGTAGGCGGCATCCTGATCGA
CACTATCGGCTGGCGCGCAGGCTGGTACATCGCCGGGGGAATCACTCTCT
TCTTCACCGTCATCGGACTGTGGTCGTTACCCAAGAGCCCTGTCCAGCGA
GACGGACACATCCTCCGCAATGTGCGGACTAAGATCGACTGGGTGGGAGC
TGGACTAGCATCAGCATTCATGGCCTTGCTCTGCTACTTGCTCGCCTTCC
AAGAAATCCAGTCCCTCAGCGCCCTCGGCGCCTCCATCCGCATCCTCCCC
AGCCTAATCGTCGGGGTCCTAATCAACCTCGTAATTGGCTTCTTCGTGCA
CCGCATCCCCGCCTACTGGATCGTAACCATCACCTCCTTCTTCTGCGCCC
TCTCCCCGCTCCTCATGGCCGTCATCGACCCAACCCAGACATACTGGGCG
AATGCCTTCGTCGCGCAGCTCCTGCAGCCTATCAGCGCGGACGCGCTCTT
CACGGTGGGGTTGATCGTCATCACGAATGTGTTTCCGGATGATACGCAGG
CGTTGGCGGGAGCGGTGTTTAATACCTCGGCGCAGTTTGGGAGTGCGTTG
GGCATGGCGGTGTTGCAGGTGATTTCGACGGTGGTGAGTGAAGAGAGGGA
AAAGGGTGGGGAGGGAGAGAAGAAGGCGTTGATGGAGGGATATCGGGCGA
GTTTTTGGACCATGTTTGGGTTGATGGTGGTTTGTACGGCGGTTGGGTTT
TGGGGGTTGAGGAGGTCTGGGAGGGTGGGGTTGAAGAGGGATTAGCATCC
TCAGCGCAAACCCCTCCCGCATCCGCTCCGCAGAAAGCATCATCATCCTC
TGCGTCGCCGCCATCGCCCTCCCCACCTTCATCACCTGGGTGCACTTCCA
AGTAAAGCGCGGCAAACCAGCATTAATCCCCAACGCACTATGGAAAAACA
CCTCTTTCTCGAGCATCTGCGCCACAGTGGCCCTCTCCAACGCCGTAATC
AACTCCATGGAACTCTTCGCCAGTCTATTATGTCGACGACCACCACTGCT
GTCACCAGTGAGGTCGGCTCACTACGCCTCTCCGCCGAGGAAGTCCGACT
TCCAGCTCCTCGCGATGACCGAAAGTCGCGCTTACAACAAGTCGTCGTGA
TCACCCAGCTGTTTGCCGTCACTCTCACAGCCAGTGTAATCAATGGCTTG
GTGGTAGTCGGACTCCCCACCATCACTGCAGACCTCCAGCTGCCTCCTTC
GCTTTCCCTCTGGCCCTCCTCGGTATGCAGTCTCGCCACGGCCTCTACAC
TTCTTCTATCCGGCTCAATTGCCGACACCATCGGCCCTCGATGGGTGGAA
CTGGTGGGATCTCTCGCCAGCGGTGCATTGATGCTCGGACAGGGCCTATC
GCAAACTGGCATTGAGCTGGTCATCATGCGAGCCTTCCAAGGTGTGGGCC
TCTCAATGCACCTTGCATCATCGGTGTCCATCGTCACCCAGCTTTTACCT
CCTGGAAAAGGCCGTAACCTGGCATTCTCCTGCATAGGCCTGAGCCAGCC
ATTGGGCTTCTCACTGGGTCTAGTAGTAGGCGGCATCCTGATCGACACTA
TCGGCTGGCGCGCAGGCTGGTACATCGCCGGGGGAATCACTCTCTTCTTC
ACCGTCATCGGACTGTGGTCGTTACCCAAGAGCCCTGTCCAGCGAGACGG
ACACATCCTCCGCAATGTGCGGACTAAGATCGACTGGGTGGGAGCTGGAC
TAGCATCAGCATTCATGGCCTTGCTCTGCTACTTGCTCGCCTTCCAAGAA
ATCCAGTCCCTCAGCGCCCTCGGCGCCTCCATCCGCATCCTCCCCAGCCT
AATCGTCGGGGTCCTAATCAACCTCGTAATTGGCTTCTTCGTGCACCGCA
TCCCCGCCTACTGGATCGTAACCATCACCTCCTTCTTCTGCGCCCTCTCC
CCGCTCCTCATGGCCGTCATCGACCCAACCCAGACATACTGGGCGAATGC
CTTCGTCGCGCAGCTCCTGCAGCCTATCAGCGCGGACGCGCTCTTCACGG
TGGGGTTGATCGTCATCACGAATGTGTTTCCGGATGATACGCAGGCGTTG
GCGGGAGCGGTGTTTAATACCTCGGCGCAGTTTGGGAGTGCGTTGGGCAT
GGCGGTGTTGCAGGTGATTTCGACGGTGGTGAGTGAAGAGAGGGAAAAGG
GTGGGGAGGGAGAGAAGAAGGCGTTGATGGAGGGATATCGGGCGAGTTTT
TGGACCATGTTTGGGTTGATGGTGGTTTGTACGGCGGTTGGGTTTTGGGG
GTTGAGGAGGTCTGGGAGGGTGGGGTTGAAGAGGGATTAGCATCCTCAGC
GCAAACCCCTCCCGCATCCGCTCCGCAGAAAGCATCATCATCCTCTGCGT
CGCCGCCATCGCCCTCCCCACCTTCATCACCTGGGTGCACTTCCAAGTAA
AGCGCGGCAAACCAGCATTAATCCCCAACGCACTATGGAAAAACACCTCT
TTCTCGAGCATCTGCGCCACAGTGGCCCTCTCCAACGCCGTAATCAACTC
CATGGAACTCTTCGCCAGTCTATTATGTCGACGACCACCACTGCTGTCAC
CAGTGAGGTCGGCTCACTACGCCTCTCCGCCGAGGAAGTCCGACTTCCAG
CTCCTCGCGATGACCGAAAGTCGCGCTTACAACAAGTCGTCGTGATCACC
CAGCTGTTTGCCGTCACTCTCACAGCCAGTGTAATCAATGGCTTGGTGGT
AGTCGGACTCCCCACCATCACTGCAGACCTCCAGCTGCCTCCTTCGCTTT
CCCTCTGGCCCTCCTCGGTATGCAGTCTCGCCACGGCCTCTACACTTCTT
CTATCCGGCTCAATTGCCGACACCATCGGCCCTCGATGGGTGGAACTGGT
GGGATCTCTCGCCAGCGGTGCATTGATGCTCGGACAGGGCCTATCGCAAA
CTGGCATTGAGCTGGTCATCATGCGAGCCTTCCAAGGTGTGGGCCTCTCA
ATGCACCTTGCATCATCGGTGTCCATCGTCACCCAGCTTTTACCTCCTGG
AAAAGGCCGTAACCTGGCATTCTCCTGCATAGGCCTGAGCCAGCCATTGG
GCTTCTCACTGGGTCTAGTAGTAGGCGGCATCCTGATCGACACTATCGGC
TGGCGCGCAGGCTGGTACATCGCCGGGGGAATCACTCTCTTCTTCACCGT
CATCGGACTGTGGTCGTTACCCAAGAGCCCTGTCCAGCGAGACGGACACA
TCCTCCGCAATGTGCGGACTAAGATCGACTGGGTGGGAGCTGGACTAGCA
TCAGCATTCATGGCCTTGCTCTGCTACTTGCTCGC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005887integral component of plasma membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_17800ATCC64974_17800Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_17800-T1ATCC64974_17800-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_17800-T1.cdsATCC64974_17800-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_17800-T1.exon3ATCC64974_17800-T1.exon3Aspergillus niger N402exon
ATCC64974_17800-T1.exon2ATCC64974_17800-T1.exon2Aspergillus niger N402exon
ATCC64974_17800-T1.exon1ATCC64974_17800-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteantiSMASH:Cluster_10000031.5
NoteEggNog:ENOG41
NoteSMCOG1005: EmrB/QacA
NoteSMCOG1005:Drug resistance transporter
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:1989796..1991478 -
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