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ATCC64974_19040-T1, ATCC64974_19040-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_19040-T1
Unique NameATCC64974_19040-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:2352844..2354231-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_19040-T1 ID=ATCC64974_19040-T1|Name=ATCC64974_19040-T1|organism=Aspergillus niger N402|type=mRNA|length=1388bp|location=Sequence derived from alignment at OGUI01000003.1:2352844..2354231- (Aspergillus niger N402)
ATGTTCTCCGGCTCCTCCCTCTTTCCGCACTGGCGGCGCAAAGCAGCCGA
ACGCTCCAGTAATAGTTCCTACGAGGTGCCCTTCTTCCTGAACGCTGCCT
ATTATCCCAATTGGAGGATATACCGGAAACAGCCTCCGTCGGCCCTTCGA
TTGGGCTTCATTTCTCATATCTTCTACGCGTTTGCATGGTACTAGTAACC
TCAAGTCGGCACCATGCTGATGGTCCCAGTCCATACCCAGAGACAGTTGT
TAACCAGCCTGCTTTTCTCGTTCATAGGGTCAAAGAAGATGGTACCGTTT
ATGTAACCAGTCCTCTCTCCCCATTGTGAGGGGCTGCTCTGGCTGACAAG
ACATGACTTCAAAACCAGCTTAGTGACGAATGGGCCGATGCGCAAATGCC
CGTCGACGGCACCAACGGCTGCCTGCGGGCCTTCGCGCAACTGAAGCCGC
AGTATTCCAAGATGAAACTCATTCTCTCAGTCGGAGGAGGCGGCAAGGGC
AGTGAGAACTTCGCCCAAGTGGCCCGCAGTCAATCCCGCACCGAGACGTT
TGTTCGGAGCGCGAGAGCACTGGTGGATCAATTTGGTCTGGACGGCATCG
ACGGTACGTGTAATGGAGCCGAGCCCCTCTCCCCTTATCATCATGGATGC
GTCATGTCGGTATAGTGAACAGAAAATAAGGTAAAATTGTGTGCATGCCC
TAAGGCTAACCAACCTTGTGCTGGCCCAACAGTGGATTGGGAATACCCCT
CCGACCCACAAGAAGGATCGGACTATATCCGTCTGCTGGCGCGACTGCGC
GAAGTCCTGCCGGCCCCGCGTTATGTTCTGGCCTCTTGTCTCCCGGCCGG
ACCATGGGCTCTCCGTAACATCGATCTTTCCAAGGCGCAACTCTATCTTG
ACCTGATCAATATCATGGCGTATGATTTCTCGGGCCCTTGGGAGAACCAG
TCGGGTCATCAGGCCCAGCTCTTCAGCAAGCATCCCGCAGCCATTTCATG
CCAAAACTCTATCTCGTACGTGCTCAACCAGGGCGTCGACCCCAAGAAGC
TCCTTCTGGGCATCCCCGCATACGGCCGCTCGTTCCTGGGTAGCACTGGA
GTTGGTCAGCGGTATGTAGGCTGTGGCGGTGAAGACGGCGTCTTCGACTA
TAGCCAGCTGCCGCGACCGGGAGCCAAGGAGCATCACGACAGCAGTCTGG
GGGCAGCATACTGCGTAGGGGGAGATGGCGGCTTCGTCACATATGACACA
CCCCAGACAGTGCAGCAGAAGGCGAAATTCGTCACAAAGATGAAGCTGGG
CGGGTTATTCTACTGGCATATTGGAGGCGACGCACGGGGACCGCGAAGTC
TGATTGAAACAGGGTATAACACATTGCATGATATGTAA
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Coding sequence (CDS) from alignment at OGUI01000003.1:2352844..2354231-

>ATCC64974_19040-T1 ID=ATCC64974_19040-T1|Name=ATCC64974_19040-T1|organism=Aspergillus niger N402|type=CDS|length=4416bp|location=Sequence derived from alignment at OGUI01000003.1:2352844..2354231- (Aspergillus niger N402)
TGGATTGGGAATACCCCTCCGACCCACAAGAAGGATCGGACTATATCCGT
CTGCTGGCGCGACTGCGCGAAGTCCTGCCGGCCCCGCGTTATGTTCTGGC
CTCTTGTCTCCCGGCCGGACCATGGGCTCTCCGTAACATCGATCTTTCCA
AGGCGCAACTCTATCTTGACCTGATCAATATCATGGCGTATGATTTCTCG
GGCCCTTGGGAGAACCAGTCGGGTCATCAGGCCCAGCTCTTCAGCAAGCA
TCCCGCAGCCATTTCATGCCAAAACTCTATCTCGTACGTGCTCAACCAGG
GCGTCGACCCCAAGAAGCTCCTTCTGGGCATCCCCGCATACGGCCGCTCG
TTCCTGGGTAGCACTGGAGTTGGTCAGCGGTATGTAGGCTGTGGCGGTGA
AGACGGCGTCTTCGACTATAGCCAGCTGCCGCGACCGGGAGCCAAGGAGC
ATCACGACAGCAGTCTGGGGGCAGCATACTGCGTAGGGGGAGATGGCGGC
TTCGTCACATATGACACACCCCAGACAGTGCAGCAGAAGGCGAAATTCGT
CACAAAGATGAAGCTGGGCGGGTTATTCTACTGGCATATTGGAGGCGACG
CACGGGGACCGCGAAGTCTGATTGAAACAGGGTATAACACATTGCATGAT
ATGTAACTTAGTGACGAATGGGCCGATGCGCAAATGCCCGTCGACGGCAC
CAACGGCTGCCTGCGGGCCTTCGCGCAACTGAAGCCGCAGTATTCCAAGA
TGAAACTCATTCTCTCAGTCGGAGGAGGCGGCAAGGGCAGTGAGAACTTC
GCCCAAGTGGCCCGCAGTCAATCCCGCACCGAGACGTTTGTTCGGAGCGC
GAGAGCACTGGTGGATCAATTTGGTCTGGACGGCATCGACGGGTCAAAGA
AGATGGTACCGTTTATATGTTCTCCGGCTCCTCCCTCTTTCCGCACTGGC
GGCGCAAAGCAGCCGAACGCTCCAGTAATAGTTCCTACGAGGTGCCCTTC
TTCCTGAACGCTGCCTATTATCCCAATTGGAGGATATACCGGAAACAGCC
TCCGTCGGCCCTTCGATTGGGCTTCATTTCTCATATCTTCTACGCGTTTG
CATGTGGATTGGGAATACCCCTCCGACCCACAAGAAGGATCGGACTATAT
CCGTCTGCTGGCGCGACTGCGCGAAGTCCTGCCGGCCCCGCGTTATGTTC
TGGCCTCTTGTCTCCCGGCCGGACCATGGGCTCTCCGTAACATCGATCTT
TCCAAGGCGCAACTCTATCTTGACCTGATCAATATCATGGCGTATGATTT
CTCGGGCCCTTGGGAGAACCAGTCGGGTCATCAGGCCCAGCTCTTCAGCA
AGCATCCCGCAGCCATTTCATGCCAAAACTCTATCTCGTACGTGCTCAAC
CAGGGCGTCGACCCCAAGAAGCTCCTTCTGGGCATCCCCGCATACGGCCG
CTCGTTCCTGGGTAGCACTGGAGTTGGTCAGCGGTATGTAGGCTGTGGCG
GTGAAGACGGCGTCTTCGACTATAGCCAGCTGCCGCGACCGGGAGCCAAG
GAGCATCACGACAGCAGTCTGGGGGCAGCATACTGCGTAGGGGGAGATGG
CGGCTTCGTCACATATGACACACCCCAGACAGTGCAGCAGAAGGCGAAAT
TCGTCACAAAGATGAAGCTGGGCGGGTTATTCTACTGGCATATTGGAGGC
GACGCACGGGGACCGCGAAGTCTGATTGAAACAGGGTATAACACATTGCA
TGATATGTAACTTAGTGACGAATGGGCCGATGCGCAAATGCCCGTCGACG
GCACCAACGGCTGCCTGCGGGCCTTCGCGCAACTGAAGCCGCAGTATTCC
AAGATGAAACTCATTCTCTCAGTCGGAGGAGGCGGCAAGGGCAGTGAGAA
CTTCGCCCAAGTGGCCCGCAGTCAATCCCGCACCGAGACGTTTGTTCGGA
GCGCGAGAGCACTGGTGGATCAATTTGGTCTGGACGGCATCGACGGGTCA
AAGAAGATGGTACCGTTTATATGTTCTCCGGCTCCTCCCTCTTTCCGCAC
TGGCGGCGCAAAGCAGCCGAACGCTCCAGTAATAGTTCCTACGAGGTGCC
CTTCTTCCTGAACGCTGCCTATTATCCCAATTGGAGGATATACCGGAAAC
AGCCTCCGTCGGCCCTTCGATTGGGCTTCATTTCTCATATCTTCTACGCG
TTTGCATGTGGATTGGGAATACCCCTCCGACCCACAAGAAGGATCGGACT
ATATCCGTCTGCTGGCGCGACTGCGCGAAGTCCTGCCGGCCCCGCGTTAT
GTTCTGGCCTCTTGTCTCCCGGCCGGACCATGGGCTCTCCGTAACATCGA
TCTTTCCAAGGCGCAACTCTATCTTGACCTGATCAATATCATGGCGTATG
ATTTCTCGGGCCCTTGGGAGAACCAGTCGGGTCATCAGGCCCAGCTCTTC
AGCAAGCATCCCGCAGCCATTTCATGCCAAAACTCTATCTCGTACGTGCT
CAACCAGGGCGTCGACCCCAAGAAGCTCCTTCTGGGCATCCCCGCATACG
GCCGCTCGTTCCTGGGTAGCACTGGAGTTGGTCAGCGGTATGTAGGCTGT
GGCGGTGAAGACGGCGTCTTCGACTATAGCCAGCTGCCGCGACCGGGAGC
CAAGGAGCATCACGACAGCAGTCTGGGGGCAGCATACTGCGTAGGGGGAG
ATGGCGGCTTCGTCACATATGACACACCCCAGACAGTGCAGCAGAAGGCG
AAATTCGTCACAAAGATGAAGCTGGGCGGGTTATTCTACTGGCATATTGG
AGGCGACGCACGGGGACCGCGAAGTCTGATTGAAACAGGGTATAACACAT
TGCATGATATGTAACTTAGTGACGAATGGGCCGATGCGCAAATGCCCGTC
GACGGCACCAACGGCTGCCTGCGGGCCTTCGCGCAACTGAAGCCGCAGTA
TTCCAAGATGAAACTCATTCTCTCAGTCGGAGGAGGCGGCAAGGGCAGTG
AGAACTTCGCCCAAGTGGCCCGCAGTCAATCCCGCACCGAGACGTTTGTT
CGGAGCGCGAGAGCACTGGTGGATCAATTTGGTCTGGACGGCATCGACGG
GTCAAAGAAGATGGTACCGTTTATATGTTCTCCGGCTCCTCCCTCTTTCC
GCACTGGCGGCGCAAAGCAGCCGAACGCTCCAGTAATAGTTCCTACGAGG
TGCCCTTCTTCCTGAACGCTGCCTATTATCCCAATTGGAGGATATACCGG
AAACAGCCTCCGTCGGCCCTTCGATTGGGCTTCATTTCTCATATCTTCTA
CGCGTTTGCATGTGGATTGGGAATACCCCTCCGACCCACAAGAAGGATCG
GACTATATCCGTCTGCTGGCGCGACTGCGCGAAGTCCTGCCGGCCCCGCG
TTATGTTCTGGCCTCTTGTCTCCCGGCCGGACCATGGGCTCTCCGTAACA
TCGATCTTTCCAAGGCGCAACTCTATCTTGACCTGATCAATATCATGGCG
TATGATTTCTCGGGCCCTTGGGAGAACCAGTCGGGTCATCAGGCCCAGCT
CTTCAGCAAGCATCCCGCAGCCATTTCATGCCAAAACTCTATCTCGTACG
TGCTCAACCAGGGCGTCGACCCCAAGAAGCTCCTTCTGGGCATCCCCGCA
TACGGCCGCTCGTTCCTGGGTAGCACTGGAGTTGGTCAGCGGTATGTAGG
CTGTGGCGGTGAAGACGGCGTCTTCGACTATAGCCAGCTGCCGCGACCGG
GAGCCAAGGAGCATCACGACAGCAGTCTGGGGGCAGCATACTGCGTAGGG
GGAGATGGCGGCTTCGTCACATATGACACACCCCAGACAGTGCAGCAGAA
GGCGAAATTCGTCACAAAGATGAAGCTGGGCGGGTTATTCTACTGGCATA
TTGGAGGCGACGCACGGGGACCGCGAAGTCTGATTGAAACAGGGTATAAC
ACATTGCATGATATGTAACTTAGTGACGAATGGGCCGATGCGCAAATGCC
CGTCGACGGCACCAACGGCTGCCTGCGGGCCTTCGCGCAACTGAAGCCGC
AGTATTCCAAGATGAAACTCATTCTCTCAGTCGGAGGAGGCGGCAAGGGC
AGTGAGAACTTCGCCCAAGTGGCCCGCAGTCAATCCCGCACCGAGACGTT
TGTTCGGAGCGCGAGAGCACTGGTGGATCAATTTGGTCTGGACGGCATCG
ACGGGTCAAAGAAGATGGTACCGTTTATATGTTCTCCGGCTCCTCCCTCT
TTCCGCACTGGCGGCGCAAAGCAGCCGAACGCTCCAGTAATAGTTCCTAC
GAGGTGCCCTTCTTCCTGAACGCTGCCTATTATCCCAATTGGAGGATATA
CCGGAAACAGCCTCCGTCGGCCCTTCGATTGGGCTTCATTTCTCATATCT
TCTACGCGTTTGCATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0008061chitin binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_19040ATCC64974_19040Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_19040-T1ATCC64974_19040-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_19040-T1.cdsATCC64974_19040-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_19040-T1.exon4ATCC64974_19040-T1.exon4Aspergillus niger N402exon
ATCC64974_19040-T1.exon3ATCC64974_19040-T1.exon3Aspergillus niger N402exon
ATCC64974_19040-T1.exon2ATCC64974_19040-T1.exon2Aspergillus niger N402exon
ATCC64974_19040-T1.exon1ATCC64974_19040-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteCAZy:GH18
DBxrefInterPro:IPR017853
DBxrefInterPro:IPR001579
DBxrefInterPro:IPR029070
DBxrefInterPro:IPR001223
DBxrefInterPro:IPR011583
DBxrefPFAM:PF00704
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:2352844..2354231 -
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