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ATCC64974_20350-T1, ATCC64974_20350-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_20350-T1
Unique NameATCC64974_20350-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:2816624..2817738-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_20350-T1 ID=ATCC64974_20350-T1|Name=ATCC64974_20350-T1|organism=Aspergillus niger N402|type=mRNA|length=1115bp|location=Sequence derived from alignment at OGUI01000003.1:2816624..2817738- (Aspergillus niger N402)
ATGCTTAGGCGCACTCTCTTCAGCGTCAGATTGACAACGCAGCAACTGAA
TGCTGCGGAGTGCTCCTCCCGGATCGCCAAACCCGCGGTGTTCGGATCAT
ACAGGAATGTCCACCGTTCGGCACGTTTGCCTGCTATCACCGCCTCAGAG
GCTCGTCGCCGGCCGACCTTGAAGCCTCACCAGCACTCGCTCGTGCAGGC
TCGCGTGAACGGACCATCGCCGTCCAGCAAGCGCACGATATTCATTCAGA
CGGAAAACACACCGAACCCTGATGTAAGACTCCCCGTGGCACACCAGCAC
GAAGATCCCAACGAACGAACAAGCATCTGACCCTTGTATGCGGAACCCAA
CAGGCATTGAAGTTCATCCCTAACCACCGTGTCCTCCCCGAAAATTTCCC
GACCACCTTCCTCGAATACCTGTCTCCCCGCTCTACCCTCGCTCCTCCGC
ACCCCTCTCCCTTGGCAGCAAGCCTGCTCAACGTCGACGGTGTTACCTCT
GTATTTTACGGGCCTGACTTCATCACCGTAACTAAGGCGACCGACTCCAA
CTGGGCGCACATCAAGCCCGAAATCTTCAGTCTCATCACTCAAGCCGTGA
CATCGGGCGAGGCGATCGTGAACACCGTCGCCAAGACTGGTGAGAGTGGC
CAGGAAGGTGGCGAGTCGGAGTCCCTGGCCTACGAGGAAGAAGAAGATGA
GGTGATCGGCATGATCAAGGAGCTTTTGGACACAAGGATTCGGCCCGCCA
TCCAGGAAGACGGTGGCGACATTGAGTTCCGTGGCTTTGAGAACGGCATT
GTCTTGTTGAAGCTGCGCGGTGCTTGCCGGACCTGCGATTCGAGCACCGT
GACGCTGCGTAACGGTATTGAGTCTATGCTTATGCATTATGTGAGTATCA
CACTACCTGCATGCATCTTGACAATAAAGTTTGACTAATTGTGTGTTTTT
AACCTACAGATCGAAGAAGTCCAAGGAGTCGAGCAAGTGCTAGACCAAGA
AGAGGAGATTTCGATGCACGAGTTCGCCAAGTTCGAGGAAAAGCTGCGCC
AGCAAAAGGGCGCTGCCGCTACTGCCTCGACGGGCGGCAAGGGAACATTG
GATTCGGCACCTTGA
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Coding sequence (CDS) from alignment at OGUI01000003.1:2816624..2817738-

>ATCC64974_20350-T1 ID=ATCC64974_20350-T1|Name=ATCC64974_20350-T1|organism=Aspergillus niger N402|type=CDS|length=2898bp|location=Sequence derived from alignment at OGUI01000003.1:2816624..2817738- (Aspergillus niger N402)
ATCGAAGAAGTCCAAGGAGTCGAGCAAGTGCTAGACCAAGAAGAGGAGAT
TTCGATGCACGAGTTCGCCAAGTTCGAGGAAAAGCTGCGCCAGCAAAAGG
GCGCTGCCGCTACTGCCTCGACGGGCGGCAAGGGAACATTGGATTCGGCA
CCTTGAGCATTGAAGTTCATCCCTAACCACCGTGTCCTCCCCGAAAATTT
CCCGACCACCTTCCTCGAATACCTGTCTCCCCGCTCTACCCTCGCTCCTC
CGCACCCCTCTCCCTTGGCAGCAAGCCTGCTCAACGTCGACGGTGTTACC
TCTGTATTTTACGGGCCTGACTTCATCACCGTAACTAAGGCGACCGACTC
CAACTGGGCGCACATCAAGCCCGAAATCTTCAGTCTCATCACTCAAGCCG
TGACATCGGGCGAGGCGATCGTGAACACCGTCGCCAAGACTGGTGAGAGT
GGCCAGGAAGGTGGCGAGTCGGAGTCCCTGGCCTACGAGGAAGAAGAAGA
TGAGGTGATCGGCATGATCAAGGAGCTTTTGGACACAAGGATTCGGCCCG
CCATCCAGGAAGACGGTGGCGACATTGAGTTCCGTGGCTTTGAGAACGGC
ATTGTCTTGTTGAAGCTGCGCGGTGCTTGCCGGACCTGCGATTCGAGCAC
CGTGACGCTGCGTAACGGTATTGAGTCTATGCTTATGCATTATATGCTTA
GGCGCACTCTCTTCAGCGTCAGATTGACAACGCAGCAACTGAATGCTGCG
GAGTGCTCCTCCCGGATCGCCAAACCCGCGGTGTTCGGATCATACAGGAA
TGTCCACCGTTCGGCACGTTTGCCTGCTATCACCGCCTCAGAGGCTCGTC
GCCGGCCGACCTTGAAGCCTCACCAGCACTCGCTCGTGCAGGCTCGCGTG
AACGGACCATCGCCGTCCAGCAAGCGCACGATATTCATTCAGACGGAAAA
CACACCGAACCCTGATATCGAAGAAGTCCAAGGAGTCGAGCAAGTGCTAG
ACCAAGAAGAGGAGATTTCGATGCACGAGTTCGCCAAGTTCGAGGAAAAG
CTGCGCCAGCAAAAGGGCGCTGCCGCTACTGCCTCGACGGGCGGCAAGGG
AACATTGGATTCGGCACCTTGAGCATTGAAGTTCATCCCTAACCACCGTG
TCCTCCCCGAAAATTTCCCGACCACCTTCCTCGAATACCTGTCTCCCCGC
TCTACCCTCGCTCCTCCGCACCCCTCTCCCTTGGCAGCAAGCCTGCTCAA
CGTCGACGGTGTTACCTCTGTATTTTACGGGCCTGACTTCATCACCGTAA
CTAAGGCGACCGACTCCAACTGGGCGCACATCAAGCCCGAAATCTTCAGT
CTCATCACTCAAGCCGTGACATCGGGCGAGGCGATCGTGAACACCGTCGC
CAAGACTGGTGAGAGTGGCCAGGAAGGTGGCGAGTCGGAGTCCCTGGCCT
ACGAGGAAGAAGAAGATGAGGTGATCGGCATGATCAAGGAGCTTTTGGAC
ACAAGGATTCGGCCCGCCATCCAGGAAGACGGTGGCGACATTGAGTTCCG
TGGCTTTGAGAACGGCATTGTCTTGTTGAAGCTGCGCGGTGCTTGCCGGA
CCTGCGATTCGAGCACCGTGACGCTGCGTAACGGTATTGAGTCTATGCTT
ATGCATTATATGCTTAGGCGCACTCTCTTCAGCGTCAGATTGACAACGCA
GCAACTGAATGCTGCGGAGTGCTCCTCCCGGATCGCCAAACCCGCGGTGT
TCGGATCATACAGGAATGTCCACCGTTCGGCACGTTTGCCTGCTATCACC
GCCTCAGAGGCTCGTCGCCGGCCGACCTTGAAGCCTCACCAGCACTCGCT
CGTGCAGGCTCGCGTGAACGGACCATCGCCGTCCAGCAAGCGCACGATAT
TCATTCAGACGGAAAACACACCGAACCCTGATATCGAAGAAGTCCAAGGA
GTCGAGCAAGTGCTAGACCAAGAAGAGGAGATTTCGATGCACGAGTTCGC
CAAGTTCGAGGAAAAGCTGCGCCAGCAAAAGGGCGCTGCCGCTACTGCCT
CGACGGGCGGCAAGGGAACATTGGATTCGGCACCTTGAGCATTGAAGTTC
ATCCCTAACCACCGTGTCCTCCCCGAAAATTTCCCGACCACCTTCCTCGA
ATACCTGTCTCCCCGCTCTACCCTCGCTCCTCCGCACCCCTCTCCCTTGG
CAGCAAGCCTGCTCAACGTCGACGGTGTTACCTCTGTATTTTACGGGCCT
GACTTCATCACCGTAACTAAGGCGACCGACTCCAACTGGGCGCACATCAA
GCCCGAAATCTTCAGTCTCATCACTCAAGCCGTGACATCGGGCGAGGCGA
TCGTGAACACCGTCGCCAAGACTGGTGAGAGTGGCCAGGAAGGTGGCGAG
TCGGAGTCCCTGGCCTACGAGGAAGAAGAAGATGAGGTGATCGGCATGAT
CAAGGAGCTTTTGGACACAAGGATTCGGCCCGCCATCCAGGAAGACGGTG
GCGACATTGAGTTCCGTGGCTTTGAGAACGGCATTGTCTTGTTGAAGCTG
CGCGGTGCTTGCCGGACCTGCGATTCGAGCACCGTGACGCTGCGTAACGG
TATTGAGTCTATGCTTATGCATTATATGCTTAGGCGCACTCTCTTCAGCG
TCAGATTGACAACGCAGCAACTGAATGCTGCGGAGTGCTCCTCCCGGATC
GCCAAACCCGCGGTGTTCGGATCATACAGGAATGTCCACCGTTCGGCACG
TTTGCCTGCTATCACCGCCTCAGAGGCTCGTCGCCGGCCGACCTTGAAGC
CTCACCAGCACTCGCTCGTGCAGGCTCGCGTGAACGGACCATCGCCGTCC
AGCAAGCGCACGATATTCATTCAGACGGAAAACACACCGAACCCTGAT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0016226iron-sulfur cluster assembly
Vocabulary: Molecular Function
TermDefinition
GO:0005506iron ion binding
GO:0051536iron-sulfur cluster binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_20350ATCC64974_20350Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_20350-T1ATCC64974_20350-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_20350-T1.cdsATCC64974_20350-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_20350-T1.exon3ATCC64974_20350-T1.exon3Aspergillus niger N402exon
ATCC64974_20350-T1.exon2ATCC64974_20350-T1.exon2Aspergillus niger N402exon
ATCC64974_20350-T1.exon1ATCC64974_20350-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR036498
DBxrefInterPro:IPR001075
DBxrefInterPro:IPR034904
DBxrefInterPro:IPR035433
DBxrefInterPro:IPR014824
DBxrefPFAM:PF01106
DBxrefPFAM:PF08712
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:2816624..2817738 -
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